RNA–Protein interactions for RNA: ENST00000593564.2

LSM4-202, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM4, Length 656 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-202ENST00000593564 LBHQ53QV2 105 aaPredicted RBP14.25□□□□□ -0.13
LSM4-202ENST00000593564 ANAPC16Q96DE5 110 aa14.25□□□□□ -0.13
LSM4-202ENST00000593564 XAGE1AQ9HD64 81 aa14.25□□□□□ -0.13
LSM4-202ENST00000593564 MT-ND4LP03901 98 aa14.24□□□□□ -0.13
LSM4-202ENST00000593564 SEC11AP67812 179 aa14.24□□□□□ -0.13
LSM4-202ENST00000593564 PAPPA-AS1Q5QFB9 102 aa14.24□□□□□ -0.13
LSM4-202ENST00000593564 NXT2Q9NPJ8 142 aaKnown RBP14.23□□□□□ -0.13
LSM4-202ENST00000593564 CDKN2A-AS1Q9UH64 79 aa14.23□□□□□ -0.13
LSM4-202ENST00000593564 F8VRH5 84 aa14.22□□□□□ -0.13
LSM4-202ENST00000593564 TP73-AS1Q9UF72 201 aa14.22□□□□□ -0.13
LSM4-202ENST00000593564 TIMM17AQ99595 171 aa14.21□□□□□ -0.13
LSM4-202ENST00000593564 CTDSP1Q9GZU7 261 aa14.21□□□□□ -0.13
LSM4-202ENST00000593564 GEMIN7Q9H840 131 aaKnown RBP14.2□□□□□ -0.14
LSM4-202ENST00000593564 G0S2P27469 103 aa14.19□□□□□ -0.14
LSM4-202ENST00000593564 MRPL55Q7Z7F7 128 aaKnown RBP14.19□□□□□ -0.14
LSM4-202ENST00000593564 CXCL5P42830 114 aa14.18□□□□□ -0.14
LSM4-202ENST00000593564 TOMM6Q96B49 74 aa14.17□□□□□ -0.14
LSM4-202ENST00000593564 BCE1O60756 84 aa14.16□□□□□ -0.14
LSM4-202ENST00000593564 RPL28P46779 137 aaKnown RBP14.16□□□□□ -0.14
LSM4-202ENST00000593564 SMIM1B2RUZ4 78 aa14.13□□□□□ -0.15
LSM4-202ENST00000593564 ERASQ7Z444 233 aa14.13□□□□□ -0.15
LSM4-202ENST00000593564 A0A087X002 238 aa14.12□□□□□ -0.15
LSM4-202ENST00000593564 TSPAN13O95857 204 aa14.11□□□□□ -0.15
LSM4-202ENST00000593564 PDZD11Q5EBL8 140 aa14.11□□□□□ -0.15
LSM4-202ENST00000593564 LINC00167Q96N53 147 aa14.11□□□□□ -0.15
LSM4-202ENST00000593564 SCGB3A1Q96QR1 104 aa14.11□□□□□ -0.15
LSM4-202ENST00000593564 TINCRA0A1B0GVN0 87 aa14.1□□□□□ -0.15
LSM4-202ENST00000593564 CRYGAP11844 174 aa14.1□□□□□ -0.15
LSM4-202ENST00000593564 COX7B2Q8TF08 81 aa14.1□□□□□ -0.15
LSM4-202ENST00000593564 IGLV5-45A0A087WSX0 123 aa14.09□□□□□ -0.15
LSM4-202ENST00000593564 KIAA1644Q3SXP7 199 aa14.09□□□□□ -0.15
LSM4-202ENST00000593564 RPL37AP8A6NKH3 93 aa14.08□□□□□ -0.16
LSM4-202ENST00000593564 ADCYAP1P18509 176 aa14.07□□□□□ -0.16
LSM4-202ENST00000593564 RAB14P61106 215 aa14.07□□□□□ -0.16
LSM4-202ENST00000593564 TYMSOSQ8TAI1 123 aa14.07□□□□□ -0.16
LSM4-202ENST00000593564 IGLV5-37A0A075B6J1 123 aa14.06□□□□□ -0.16
LSM4-202ENST00000593564 LINC01549A6NIU2 74 aa14.05□□□□□ -0.16
LSM4-202ENST00000593564 GAGE10A6NGK3 116 aa14.04□□□□□ -0.16
LSM4-202ENST00000593564 KRTAP13-1Q8IUC0 172 aa14.04□□□□□ -0.16
LSM4-202ENST00000593564 CST9LQ9H4G1 147 aa14.04□□□□□ -0.16
LSM4-202ENST00000593564 TRAV9-1A0A075B6T8 112 aa14.03□□□□□ -0.16
LSM4-202ENST00000593564 LINC01546A6NGU7 62 aa14.03□□□□□ -0.16
LSM4-202ENST00000593564 A0A0U1RQV1 116 aa14.02□□□□□ -0.17
LSM4-202ENST00000593564 SPINK8P0C7L1 97 aa14.02□□□□□ -0.17
LSM4-202ENST00000593564 NKAPP1Q8N9T2 125 aa14.02□□□□□ -0.17
LSM4-202ENST00000593564 RAB5BP61020 215 aa14.01□□□□□ -0.17
LSM4-202ENST00000593564 ANAPC11Q9NYG5 84 aa14.01□□□□□ -0.17
LSM4-202ENST00000593564 UBE2AP49459 152 aa14□□□□□ -0.17
LSM4-202ENST00000593564 PMVKQ15126 192 aa13.99□□□□□ -0.17
LSM4-202ENST00000593564 KRTAP13-2Q52LG2 175 aa13.99□□□□□ -0.17
LSM4-202ENST00000593564 MRPL18Q9H0U6 180 aaKnown RBP13.99□□□□□ -0.17
LSM4-202ENST00000593564 H3BRM9 83 aa13.97□□□□□ -0.17
LSM4-202ENST00000593564 ATP5LO75964 103 aa13.97□□□□□ -0.17
LSM4-202ENST00000593564 FAM229BQ4G0N7 80 aa13.97□□□□□ -0.17
LSM4-202ENST00000593564 GNB1LQ9BYB4 327 aa13.97□□□□□ -0.17
LSM4-202ENST00000593564 FAT4Q6V0I7 4981 aa13.96□□□□□ -0.17
LSM4-202ENST00000593564 CLLU1Q5K131 121 aa13.96□□□□□ -0.17
LSM4-202ENST00000593564 IGKV2-28A0A075B6P5 120 aa13.94□□□□□ -0.18
LSM4-202ENST00000593564 SCO1O75880 301 aa13.94□□□□□ -0.18
LSM4-202ENST00000593564 IGKV2D-28P01615 120 aa13.94□□□□□ -0.18
LSM4-202ENST00000593564 FA2HQ7L5A8 372 aa13.93□□□□□ -0.18
LSM4-202ENST00000593564 IGLV5-39A0A0G2JS06 123 aa13.92□□□□□ -0.18
LSM4-202ENST00000593564 S100PP25815 95 aa13.92□□□□□ -0.18
LSM4-202ENST00000593564 UQCC3Q6UW78 93 aa13.92□□□□□ -0.18
LSM4-202ENST00000593564 LINC00304Q8N9R0 145 aa13.92□□□□□ -0.18
LSM4-202ENST00000593564 TMEM218A2RU14 115 aa13.91□□□□□ -0.18
LSM4-202ENST00000593564 IGLC3P0DOY3 106 aa13.91□□□□□ -0.18
LSM4-202ENST00000593564 PFN2P35080 140 aa13.91□□□□□ -0.18
LSM4-202ENST00000593564 SMCO4Q9NRQ5 59 aa13.91□□□□□ -0.18
LSM4-202ENST00000593564 VPREB1P12018 145 aa13.9□□□□□ -0.18
LSM4-202ENST00000593564 COX19Q49B96 90 aa13.89□□□□□ -0.19
LSM4-202ENST00000593564 RETNLBQ9BQ08 111 aa13.89□□□□□ -0.19
LSM4-202ENST00000593564 MUC17Q685J3 4493 aa13.89□□□□□ -0.19
LSM4-202ENST00000593564 PRLHP81277 87 aa13.88□□□□□ -0.19
LSM4-202ENST00000593564 SND1-IT1Q9HBX3 110 aa13.88□□□□□ -0.19
LSM4-202ENST00000593564 IGKV2D-26A0A0A0MRZ7 120 aa13.87□□□□□ -0.19
LSM4-202ENST00000593564 TMEM126AQ9H061 195 aa13.87□□□□□ -0.19
LSM4-202ENST00000593564 ERG28Q9UKR5 140 aa13.87□□□□□ -0.19
LSM4-202ENST00000593564 ZNF22P17026 224 aaPredicted RBP13.86□□□□□ -0.19
LSM4-202ENST00000593564 FABP9Q0Z7S8 132 aa13.86□□□□□ -0.19
LSM4-202ENST00000593564 COX17Q14061 63 aa13.86□□□□□ -0.19
LSM4-202ENST00000593564 FAM19A1Q7Z5A9 133 aa13.86□□□□□ -0.19
LSM4-202ENST00000593564 TMEM238C9JI98 176 aa13.85□□□□□ -0.19
LSM4-202ENST00000593564 CTAG1AP78358 180 aa13.85□□□□□ -0.19
LSM4-202ENST00000593564 RPL24P83731 157 aaKnown RBP13.85□□□□□ -0.19
LSM4-202ENST00000593564 SEC11CQ9BY50 192 aa13.85□□□□□ -0.19
LSM4-202ENST00000593564 A0A096LNJ9 63 aa13.83□□□□□ -0.2
LSM4-202ENST00000593564 M0R378 163 aa13.83□□□□□ -0.2
LSM4-202ENST00000593564 NDUFA6P56556 154 aa13.83□□□□□ -0.2
LSM4-202ENST00000593564 TPRXLQ17RH7 258 aa13.83□□□□□ -0.2
LSM4-202ENST00000593564 LCE2AQ5TA79 106 aaPredicted RBP13.81□□□□□ -0.2
LSM4-202ENST00000593564 Q8NDZ9 215 aa13.8□□□□□ -0.2
LSM4-202ENST00000593564 PLEKHB2Q96CS7 222 aa13.8□□□□□ -0.2
LSM4-202ENST00000593564 CDIP1Q9H305 208 aa13.8□□□□□ -0.2
LSM4-202ENST00000593564 IGLV7-46A0A075B6I9 117 aa13.79□□□□□ -0.2
LSM4-202ENST00000593564 SFTA2Q6UW10 78 aa13.79□□□□□ -0.2
LSM4-202ENST00000593564 ZNF625Q96I27 306 aaPredicted RBP13.79□□□□□ -0.2
LSM4-202ENST00000593564 CBLN2Q8IUK8 224 aa13.78□□□□□ -0.2
LSM4-202ENST00000593564 URB1-AS1Q96HZ7 61 aa13.78□□□□□ -0.2
LSM4-202ENST00000593564 KRTAP9-2Q9BYQ4 174 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms