RNA–Protein interactions for RNA: ENST00000589219.1

VPS25-202, Transcript of vacuolar protein sorting 25 homolog, humanhuman

TSL 2

Gene VPS25, Length 914 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-202ENST00000589219 WFDC2Q14508 124 aa6.9□□□□□ -1.3
VPS25-202ENST00000589219 LINC00308Q8TCZ7 52 aa6.9□□□□□ -1.3
VPS25-202ENST00000589219 VPS25Q9BRG1 176 aa6.9□□□□□ -1.3
VPS25-202ENST00000589219 DNAH9Q9NYC9 4486 aa6.9□□□□□ -1.31
VPS25-202ENST00000589219 COX6CP09669 75 aa6.89□□□□□ -1.31
VPS25-202ENST00000589219 ATXN8Q156A1 80 aa6.89□□□□□ -1.31
VPS25-202ENST00000589219 CELA1Q9UNI1 258 aa6.89□□□□□ -1.31
VPS25-202ENST00000589219 ICOSQ9Y6W8 199 aa6.89□□□□□ -1.31
VPS25-202ENST00000589219 IGKV3OR2-268A0A0C4DH90 116 aa6.88□□□□□ -1.31
VPS25-202ENST00000589219 TMEM262E9PQX1 116 aa6.88□□□□□ -1.31
VPS25-202ENST00000589219 RPL13AP40429 203 aaKnown RBP6.88□□□□□ -1.31
VPS25-202ENST00000589219 MRPL23Q16540 153 aaKnown RBP6.88□□□□□ -1.31
VPS25-202ENST00000589219 H7C2G1 150 aa6.87□□□□□ -1.31
VPS25-202ENST00000589219 DEFB4AO15263 64 aa6.87□□□□□ -1.31
VPS25-202ENST00000589219 TRIAP1O43715 76 aa6.87□□□□□ -1.31
VPS25-202ENST00000589219 NPC2P61916 151 aa6.87□□□□□ -1.31
VPS25-202ENST00000589219 LELP1Q5T871 98 aa6.87□□□□□ -1.31
VPS25-202ENST00000589219 MUC7Q8TAX7 377 aa6.87□□□□□ -1.31
VPS25-202ENST00000589219 STAB2Q8WWQ8 2551 aa6.87□□□□□ -1.31
VPS25-202ENST00000589219 IBA57-AS1B1ANH7 110 aa6.86□□□□□ -1.31
VPS25-202ENST00000589219 ETDBQ3ZM63 59 aa6.86□□□□□ -1.31
VPS25-202ENST00000589219 Q8IZM0 81 aa6.86□□□□□ -1.31
VPS25-202ENST00000589219 DAND5Q8N907 189 aa6.86□□□□□ -1.31
VPS25-202ENST00000589219 LINC01600Q96MT4 127 aa6.86□□□□□ -1.31
VPS25-202ENST00000589219 C11orf68Q9H3H3 251 aaKnown RBP6.86□□□□□ -1.31
VPS25-202ENST00000589219 TOMM7Q9P0U1 55 aa6.86□□□□□ -1.31
VPS25-202ENST00000589219 A0A096LPF7 62 aa6.85□□□□□ -1.31
VPS25-202ENST00000589219 H3BNG1 76 aa6.85□□□□□ -1.31
VPS25-202ENST00000589219 CXCL5P42830 114 aa6.85□□□□□ -1.31
VPS25-202ENST00000589219 LINC01620Q4KN68 170 aa6.85□□□□□ -1.31
VPS25-202ENST00000589219 SOSTDC1Q6X4U4 206 aa6.85□□□□□ -1.31
VPS25-202ENST00000589219 TEN1Q86WV5 123 aa6.85□□□□□ -1.31
VPS25-202ENST00000589219 MTURNQ8N3F0 131 aa6.85□□□□□ -1.31
VPS25-202ENST00000589219 SLC25A20O43772 301 aa6.84□□□□□ -1.31
VPS25-202ENST00000589219 XCL1P47992 114 aa6.84□□□□□ -1.31
VPS25-202ENST00000589219 CASC10Q5T4H9 136 aa6.84□□□□□ -1.31
VPS25-202ENST00000589219 CD164L2Q6UWJ8 174 aa6.84□□□□□ -1.31
VPS25-202ENST00000589219 C5orf38Q86SI9 138 aa6.84□□□□□ -1.31
VPS25-202ENST00000589219 PPDPFLQ8WWR9 84 aa6.84□□□□□ -1.31
VPS25-202ENST00000589219 RYR3Q15413 4870 aa6.84□□□□□ -1.32
VPS25-202ENST00000589219 TRAV13-2A0A0B4J235 113 aa6.83□□□□□ -1.32
VPS25-202ENST00000589219 TRBV10-2A0A0K0K1G8 114 aa6.83□□□□□ -1.32
VPS25-202ENST00000589219 A0A0U1RRA0 63 aa6.83□□□□□ -1.32
VPS25-202ENST00000589219 C9JAW5 83 aa6.83□□□□□ -1.32
VPS25-202ENST00000589219 COX7A2LO14548 114 aa6.83□□□□□ -1.32
VPS25-202ENST00000589219 CRPP02741 224 aa6.83□□□□□ -1.32
VPS25-202ENST00000589219 HTN3P15516 51 aa6.83□□□□□ -1.32
VPS25-202ENST00000589219 MIR7-3HGQ8N6C7 128 aa6.83□□□□□ -1.32
VPS25-202ENST00000589219 TM2D3Q9BRN9 247 aa6.83□□□□□ -1.32
VPS25-202ENST00000589219 H3BT86 120 aa6.82□□□□□ -1.32
VPS25-202ENST00000589219 LST1O00453 97 aa6.82□□□□□ -1.32
VPS25-202ENST00000589219 ANGP03950 147 aaKnown RBP6.82□□□□□ -1.32
VPS25-202ENST00000589219 LINC00158P58513 81 aa6.82□□□□□ -1.32
VPS25-202ENST00000589219 REG3AQ06141 175 aa6.82□□□□□ -1.32
VPS25-202ENST00000589219 FOXI1Q12951 378 aa6.82□□□□□ -1.32
VPS25-202ENST00000589219 C6orf226Q5I0X4 101 aa6.82□□□□□ -1.32
VPS25-202ENST00000589219 CLPSL2Q6UWE3 100 aa6.82□□□□□ -1.32
VPS25-202ENST00000589219 LINC00269Q8N2A0 174 aa6.82□□□□□ -1.32
VPS25-202ENST00000589219 CHCHD10Q8WYQ3 142 aaPredicted RBP6.82□□□□□ -1.32
VPS25-202ENST00000589219 CFAP161Q6P656 301 aa6.81□□□□□ -1.32
VPS25-202ENST00000589219 ANKRD29Q8N6D5 301 aa6.81□□□□□ -1.32
VPS25-202ENST00000589219 SPATA25Q9BR10 227 aa6.81□□□□□ -1.32
VPS25-202ENST00000589219 CARD19Q96LW7 228 aa6.8□□□□□ -1.32
VPS25-202ENST00000589219 SND1-IT1Q9HBX3 110 aa6.8□□□□□ -1.32
VPS25-202ENST00000589219 MALP21145 153 aa6.79□□□□□ -1.32
VPS25-202ENST00000589219 CKS1BP61024 79 aa6.79□□□□□ -1.32
VPS25-202ENST00000589219 COX17Q14061 63 aa6.79□□□□□ -1.32
VPS25-202ENST00000589219 RETNQ9HD89 108 aa6.79□□□□□ -1.32
VPS25-202ENST00000589219 PRR34Q9NV39 138 aa6.79□□□□□ -1.32
VPS25-202ENST00000589219 RPL28P46779 137 aaKnown RBP6.78□□□□□ -1.32
VPS25-202ENST00000589219 CCL18P55774 89 aa6.78□□□□□ -1.32
VPS25-202ENST00000589219 TRAV8-4A0A0B4J246 113 aa6.77□□□□□ -1.33
VPS25-202ENST00000589219 LCE6AA0A183 80 aa6.77□□□□□ -1.33
VPS25-202ENST00000589219 TRACP01848 142 aa6.77□□□□□ -1.33
VPS25-202ENST00000589219 KIAA0087Q14695 138 aa6.77□□□□□ -1.33
VPS25-202ENST00000589219 LYPD5Q6UWN5 251 aa6.77□□□□□ -1.33
VPS25-202ENST00000589219 C2orf82Q6UX34 121 aa6.77□□□□□ -1.33
VPS25-202ENST00000589219 CLEC2BQ92478 149 aa6.77□□□□□ -1.33
VPS25-202ENST00000589219 UBE2WQ96B02 151 aa6.77□□□□□ -1.33
VPS25-202ENST00000589219 KLK5Q9Y337 293 aaPredicted RBP6.77□□□□□ -1.33
VPS25-202ENST00000589219 TENM2Q9NT68 2774 aa6.76□□□□□ -1.33
VPS25-202ENST00000589219 HUWE1Q7Z6Z7 4374 aaKnown RBP6.76□□□□□ -1.33
VPS25-202ENST00000589219 LOC100996750A0A140TA64 210 aa6.76□□□□□ -1.33
VPS25-202ENST00000589219 GAGE12HA6NDE8 117 aa6.76□□□□□ -1.33
VPS25-202ENST00000589219 PFN2P35080 140 aa6.76□□□□□ -1.33
VPS25-202ENST00000589219 SPAG11BQ08648 103 aa6.76□□□□□ -1.33
VPS25-202ENST00000589219 Q8N3U1 123 aa6.76□□□□□ -1.33
VPS25-202ENST00000589219 KRTAP4-6Q9BYQ5 205 aa6.76□□□□□ -1.33
VPS25-202ENST00000589219 DNAH7Q8WXX0 4024 aa6.76□□□□□ -1.33
VPS25-202ENST00000589219 IGLV10-54A0A075B6I4 117 aa6.75□□□□□ -1.33
VPS25-202ENST00000589219 IGKV2-28A0A075B6P5 120 aa6.75□□□□□ -1.33
VPS25-202ENST00000589219 NDUFC2O95298 119 aa6.75□□□□□ -1.33
VPS25-202ENST00000589219 IGKV2D-28P01615 120 aa6.75□□□□□ -1.33
VPS25-202ENST00000589219 PCP4P48539 62 aa6.75□□□□□ -1.33
VPS25-202ENST00000589219 Q6ZTC4 211 aa6.75□□□□□ -1.33
VPS25-202ENST00000589219 LINC00337Q8N6G1 96 aa6.75□□□□□ -1.33
VPS25-202ENST00000589219 NTN5Q8WTR8 489 aaPredicted RBP6.75□□□□□ -1.33
VPS25-202ENST00000589219 KLK12Q9UKR0 248 aa6.74□□□□□ -1.33
VPS25-202ENST00000589219 A0A0J9YWU9 116 aa6.73□□□□□ -1.33
VPS25-202ENST00000589219 H0YGX0 51 aa6.73□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 89.1 ms