RNA–Protein interactions for RNA: ENST00000588300.1

ERCC1-206, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 2

Gene ERCC1, Length 1,055 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-206ENST00000588300 ANAPC16Q96DE5 110 aa9.54□□□□□ -0.88
ERCC1-206ENST00000588300 IGIPA6NJ69 53 aa9.53□□□□□ -0.88
ERCC1-206ENST00000588300 NUPR1O60356 82 aa9.53□□□□□ -0.88
ERCC1-206ENST00000588300 ZNF861PO60384 105 aa9.53□□□□□ -0.88
ERCC1-206ENST00000588300 MT-ND4LP03901 98 aa9.53□□□□□ -0.88
ERCC1-206ENST00000588300 HERVK_113P63121 156 aa9.53□□□□□ -0.88
ERCC1-206ENST00000588300 SEC11AP67812 179 aa9.53□□□□□ -0.88
ERCC1-206ENST00000588300 LINC00469Q8N7U9 141 aa9.53□□□□□ -0.88
ERCC1-206ENST00000588300 ALKBH7Q9BT30 221 aaPredicted RBP9.53□□□□□ -0.88
ERCC1-206ENST00000588300 CARHSP1Q9Y2V2 147 aaKnown RBP9.53□□□□□ -0.88
ERCC1-206ENST00000588300 C22orf24Q9Y442 160 aa9.53□□□□□ -0.88
ERCC1-206ENST00000588300 LBHQ53QV2 105 aaPredicted RBP9.52□□□□□ -0.89
ERCC1-206ENST00000588300 PAPPA-AS1Q5QFB9 102 aa9.52□□□□□ -0.89
ERCC1-206ENST00000588300 XAGE1AQ9HD64 81 aa9.52□□□□□ -0.89
ERCC1-206ENST00000588300 NXT2Q9NPJ8 142 aaKnown RBP9.52□□□□□ -0.89
ERCC1-206ENST00000588300 PRR4Q16378 134 aa9.51□□□□□ -0.89
ERCC1-206ENST00000588300 F8VRH5 84 aa9.5□□□□□ -0.89
ERCC1-206ENST00000588300 G0S2P27469 103 aa9.5□□□□□ -0.89
ERCC1-206ENST00000588300 GEMIN7Q9H840 131 aaKnown RBP9.5□□□□□ -0.89
ERCC1-206ENST00000588300 CDKN2A-AS1Q9UH64 79 aa9.5□□□□□ -0.89
ERCC1-206ENST00000588300 CXCL5P42830 114 aa9.49□□□□□ -0.89
ERCC1-206ENST00000588300 TIMM17AQ99595 171 aa9.49□□□□□ -0.89
ERCC1-206ENST00000588300 CTDSP1Q9GZU7 261 aa9.49□□□□□ -0.89
ERCC1-206ENST00000588300 TP73-AS1Q9UF72 201 aa9.49□□□□□ -0.89
ERCC1-206ENST00000588300 LORP23490 312 aaPredicted RBP9.48□□□□□ -0.89
ERCC1-206ENST00000588300 UQCC3Q6UW78 93 aa9.47□□□□□ -0.89
ERCC1-206ENST00000588300 MRPL55Q7Z7F7 128 aaKnown RBP9.47□□□□□ -0.89
ERCC1-206ENST00000588300 TOMM6Q96B49 74 aa9.47□□□□□ -0.89
ERCC1-206ENST00000588300 RPL28P46779 137 aaKnown RBP9.46□□□□□ -0.9
ERCC1-206ENST00000588300 ADCYAP1P18509 176 aa9.45□□□□□ -0.9
ERCC1-206ENST00000588300 SMIM1B2RUZ4 78 aa9.44□□□□□ -0.9
ERCC1-206ENST00000588300 BCE1O60756 84 aa9.44□□□□□ -0.9
ERCC1-206ENST00000588300 IFITM2Q01629 132 aa9.44□□□□□ -0.9
ERCC1-206ENST00000588300 ERASQ7Z444 233 aa9.44□□□□□ -0.9
ERCC1-206ENST00000588300 PDZD11Q5EBL8 140 aa9.43□□□□□ -0.9
ERCC1-206ENST00000588300 COMMD7Q86VX2 200 aa9.43□□□□□ -0.9
ERCC1-206ENST00000588300 COX7B2Q8TF08 81 aa9.43□□□□□ -0.9
ERCC1-206ENST00000588300 SCGB3A1Q96QR1 104 aa9.43□□□□□ -0.9
ERCC1-206ENST00000588300 TINCRA0A1B0GVN0 87 aa9.42□□□□□ -0.9
ERCC1-206ENST00000588300 TMEM218A2RU14 115 aa9.42□□□□□ -0.9
ERCC1-206ENST00000588300 TSPAN13O95857 204 aa9.42□□□□□ -0.9
ERCC1-206ENST00000588300 KIAA1644Q3SXP7 199 aa9.42□□□□□ -0.9
ERCC1-206ENST00000588300 LINC00167Q96N53 147 aa9.42□□□□□ -0.9
ERCC1-206ENST00000588300 A0A087X002 238 aa9.41□□□□□ -0.9
ERCC1-206ENST00000588300 IGLV5-45A0A087WSX0 123 aa9.4□□□□□ -0.9
ERCC1-206ENST00000588300 LINC01549A6NIU2 74 aa9.4□□□□□ -0.9
ERCC1-206ENST00000588300 RPL37AP8A6NKH3 93 aa9.4□□□□□ -0.9
ERCC1-206ENST00000588300 CRYGAP11844 174 aa9.4□□□□□ -0.9
ERCC1-206ENST00000588300 TYMSOSQ8TAI1 123 aa9.4□□□□□ -0.9
ERCC1-206ENST00000588300 SEC11CQ9BY50 192 aa9.4□□□□□ -0.9
ERCC1-206ENST00000588300 S100PP25815 95 aa9.39□□□□□ -0.91
ERCC1-206ENST00000588300 TRAV9-1A0A075B6T8 112 aa9.38□□□□□ -0.91
ERCC1-206ENST00000588300 GAGE10A6NGK3 116 aa9.38□□□□□ -0.91
ERCC1-206ENST00000588300 NKAPP1Q8N9T2 125 aa9.38□□□□□ -0.91
ERCC1-206ENST00000588300 MUC2Q02817 5179 aa9.37□□□□□ -0.91
ERCC1-206ENST00000588300 IGLV5-37A0A075B6J1 123 aa9.37□□□□□ -0.91
ERCC1-206ENST00000588300 SPINK8P0C7L1 97 aa9.37□□□□□ -0.91
ERCC1-206ENST00000588300 RAB5BP61020 215 aa9.37□□□□□ -0.91
ERCC1-206ENST00000588300 CST9LQ9H4G1 147 aa9.37□□□□□ -0.91
ERCC1-206ENST00000588300 A0A0U1RQV1 116 aa9.36□□□□□ -0.91
ERCC1-206ENST00000588300 LINC01546A6NGU7 62 aa9.36□□□□□ -0.91
ERCC1-206ENST00000588300 UBE2AP49459 152 aa9.36□□□□□ -0.91
ERCC1-206ENST00000588300 PMVKQ15126 192 aa9.35□□□□□ -0.91
ERCC1-206ENST00000588300 MRPL18Q9H0U6 180 aaKnown RBP9.35□□□□□ -0.91
ERCC1-206ENST00000588300 H3BRM9 83 aa9.34□□□□□ -0.91
ERCC1-206ENST00000588300 ATP5LO75964 103 aa9.34□□□□□ -0.91
ERCC1-206ENST00000588300 KRTAP13-1Q8IUC0 172 aa9.34□□□□□ -0.91
ERCC1-206ENST00000588300 GNB1LQ9BYB4 327 aa9.34□□□□□ -0.91
ERCC1-206ENST00000588300 RHEBQ15382 184 aa9.33□□□□□ -0.92
ERCC1-206ENST00000588300 FA2HQ7L5A8 372 aa9.33□□□□□ -0.92
ERCC1-206ENST00000588300 SMCO4Q9NRQ5 59 aa9.33□□□□□ -0.92
ERCC1-206ENST00000588300 ANAPC11Q9NYG5 84 aa9.33□□□□□ -0.92
ERCC1-206ENST00000588300 IGKV2-28A0A075B6P5 120 aa9.32□□□□□ -0.92
ERCC1-206ENST00000588300 IGKV2D-28P01615 120 aa9.32□□□□□ -0.92
ERCC1-206ENST00000588300 FAM229BQ4G0N7 80 aa9.32□□□□□ -0.92
ERCC1-206ENST00000588300 KRTAP13-2Q52LG2 175 aa9.32□□□□□ -0.92
ERCC1-206ENST00000588300 RPS10P5Q9NQ39 176 aa9.32□□□□□ -0.92
ERCC1-206ENST00000588300 COX19Q49B96 90 aa9.31□□□□□ -0.92
ERCC1-206ENST00000588300 SCO1O75880 301 aa9.3□□□□□ -0.92
ERCC1-206ENST00000588300 PFN2P35080 140 aa9.3□□□□□ -0.92
ERCC1-206ENST00000588300 IGLV5-39A0A0G2JS06 123 aa9.29□□□□□ -0.92
ERCC1-206ENST00000588300 IGLC3P0DOY3 106 aa9.29□□□□□ -0.92
ERCC1-206ENST00000588300 C10orf91Q5T1B1 145 aa9.29□□□□□ -0.92
ERCC1-206ENST00000588300 LINC00304Q8N9R0 145 aa9.29□□□□□ -0.92
ERCC1-206ENST00000588300 PRLHP81277 87 aa9.28□□□□□ -0.92
ERCC1-206ENST00000588300 FABP9Q0Z7S8 132 aa9.28□□□□□ -0.92
ERCC1-206ENST00000588300 NDUFA5Q16718 116 aa9.28□□□□□ -0.92
ERCC1-206ENST00000588300 IGKV2D-26A0A0A0MRZ7 120 aa9.27□□□□□ -0.93
ERCC1-206ENST00000588300 VPREB1P12018 145 aa9.27□□□□□ -0.93
ERCC1-206ENST00000588300 NDUFA6P56556 154 aa9.27□□□□□ -0.93
ERCC1-206ENST00000588300 FAM19A1Q7Z5A9 133 aa9.27□□□□□ -0.93
ERCC1-206ENST00000588300 RETNLBQ9BQ08 111 aa9.27□□□□□ -0.93
ERCC1-206ENST00000588300 SND1-IT1Q9HBX3 110 aa9.27□□□□□ -0.93
ERCC1-206ENST00000588300 ERG28Q9UKR5 140 aa9.27□□□□□ -0.93
ERCC1-206ENST00000588300 ZNF22P17026 224 aaPredicted RBP9.26□□□□□ -0.93
ERCC1-206ENST00000588300 RPL24P83731 157 aaKnown RBP9.26□□□□□ -0.93
ERCC1-206ENST00000588300 COX17Q14061 63 aa9.26□□□□□ -0.93
ERCC1-206ENST00000588300 TMEM126AQ9H061 195 aa9.26□□□□□ -0.93
ERCC1-206ENST00000588300 APOC3P02656 99 aa9.25□□□□□ -0.93
ERCC1-206ENST00000588300 TMEM238C9JI98 176 aa9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms