RNA–Protein interactions for RNA: ENST00000584887.1

TOP3A-219, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 5

Gene TOP3A, Length 545 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-219ENST00000584887 G0S2P27469 103 aa12.31□□□□□ -0.44
TOP3A-219ENST00000584887 KRTAP1-4P0C5Y4 121 aa12.3□□□□□ -0.44
TOP3A-219ENST00000584887 FAM19A3Q7Z5A8 133 aa12.3□□□□□ -0.44
TOP3A-219ENST00000584887 TOMM6Q96B49 74 aa12.3□□□□□ -0.44
TOP3A-219ENST00000584887 TIMM17AQ99595 171 aa12.3□□□□□ -0.44
TOP3A-219ENST00000584887 SCGB3A1Q96QR1 104 aa12.29□□□□□ -0.44
TOP3A-219ENST00000584887 C22orf24Q9Y442 160 aa12.29□□□□□ -0.44
TOP3A-219ENST00000584887 F8VRH5 84 aa12.28□□□□□ -0.44
TOP3A-219ENST00000584887 RNF213Q63HN8 5207 aa12.28□□□□□ -0.44
TOP3A-219ENST00000584887 LBHQ53QV2 105 aaPredicted RBP12.27□□□□□ -0.45
TOP3A-219ENST00000584887 ERASQ7Z444 233 aa12.26□□□□□ -0.45
TOP3A-219ENST00000584887 CXCL5P42830 114 aa12.25□□□□□ -0.45
TOP3A-219ENST00000584887 CLLU1Q5K131 121 aa12.25□□□□□ -0.45
TOP3A-219ENST00000584887 ZNF861PO60384 105 aa12.24□□□□□ -0.45
TOP3A-219ENST00000584887 ADCYAP1P18509 176 aa12.24□□□□□ -0.45
TOP3A-219ENST00000584887 RPL13AP40429 203 aaKnown RBP12.24□□□□□ -0.45
TOP3A-219ENST00000584887 SMIM1B2RUZ4 78 aa12.23□□□□□ -0.45
TOP3A-219ENST00000584887 NUPR1O60356 82 aa12.23□□□□□ -0.45
TOP3A-219ENST00000584887 COX7B2Q8TF08 81 aa12.23□□□□□ -0.45
TOP3A-219ENST00000584887 TRAV9-1A0A075B6T8 112 aa12.22□□□□□ -0.45
TOP3A-219ENST00000584887 MRPL55Q7Z7F7 128 aaKnown RBP12.22□□□□□ -0.45
TOP3A-219ENST00000584887 TINCRA0A1B0GVN0 87 aa12.21□□□□□ -0.45
TOP3A-219ENST00000584887 S100PP25815 95 aa12.21□□□□□ -0.45
TOP3A-219ENST00000584887 PDZD11Q5EBL8 140 aa12.21□□□□□ -0.45
TOP3A-219ENST00000584887 TMEM218A2RU14 115 aa12.2□□□□□ -0.46
TOP3A-219ENST00000584887 SPINK8P0C7L1 97 aa12.2□□□□□ -0.46
TOP3A-219ENST00000584887 PRR4Q16378 134 aa12.2□□□□□ -0.46
TOP3A-219ENST00000584887 TP73-AS1Q9UF72 201 aa12.2□□□□□ -0.46
TOP3A-219ENST00000584887 RPL37AP8A6NKH3 93 aa12.19□□□□□ -0.46
TOP3A-219ENST00000584887 UQCC3Q6UW78 93 aa12.19□□□□□ -0.46
TOP3A-219ENST00000584887 FA2HQ7L5A8 372 aa12.19□□□□□ -0.46
TOP3A-219ENST00000584887 CST9LQ9H4G1 147 aa12.19□□□□□ -0.46
TOP3A-219ENST00000584887 GAGE10A6NGK3 116 aa12.18□□□□□ -0.46
TOP3A-219ENST00000584887 RAB5BP61020 215 aa12.18□□□□□ -0.46
TOP3A-219ENST00000584887 GNB1LQ9BYB4 327 aa12.18□□□□□ -0.46
TOP3A-219ENST00000584887 SMCO4Q9NRQ5 59 aa12.18□□□□□ -0.46
TOP3A-219ENST00000584887 CARHSP1Q9Y2V2 147 aaKnown RBP12.18□□□□□ -0.46
TOP3A-219ENST00000584887 IGLV5-45A0A087WSX0 123 aa12.17□□□□□ -0.46
TOP3A-219ENST00000584887 RPL28P46779 137 aaKnown RBP12.17□□□□□ -0.46
TOP3A-219ENST00000584887 LINC01549A6NIU2 74 aa12.16□□□□□ -0.46
TOP3A-219ENST00000584887 BCE1O60756 84 aa12.16□□□□□ -0.46
TOP3A-219ENST00000584887 PMVKQ15126 192 aa12.16□□□□□ -0.46
TOP3A-219ENST00000584887 LINC00167Q96N53 147 aa12.16□□□□□ -0.46
TOP3A-219ENST00000584887 FABP9Q0Z7S8 132 aa12.15□□□□□ -0.46
TOP3A-219ENST00000584887 LINC01546A6NGU7 62 aa12.14□□□□□ -0.47
TOP3A-219ENST00000584887 NKAPP1Q8N9T2 125 aa12.14□□□□□ -0.47
TOP3A-219ENST00000584887 MRPL18Q9H0U6 180 aaKnown RBP12.14□□□□□ -0.47
TOP3A-219ENST00000584887 H3BRM9 83 aa12.13□□□□□ -0.47
TOP3A-219ENST00000584887 TSPAN13O95857 204 aa12.13□□□□□ -0.47
TOP3A-219ENST00000584887 NDUFA6P56556 154 aa12.13□□□□□ -0.47
TOP3A-219ENST00000584887 SEC11CQ9BY50 192 aa12.13□□□□□ -0.47
TOP3A-219ENST00000584887 ATP5LO75964 103 aa12.12□□□□□ -0.47
TOP3A-219ENST00000584887 COX19Q49B96 90 aa12.12□□□□□ -0.47
TOP3A-219ENST00000584887 LPAP08519 4548 aa12.11□□□□□ -0.47
TOP3A-219ENST00000584887 UBE2AP49459 152 aa12.1□□□□□ -0.47
TOP3A-219ENST00000584887 IFITM2Q01629 132 aa12.1□□□□□ -0.47
TOP3A-219ENST00000584887 COMMD7Q86VX2 200 aa12.1□□□□□ -0.47
TOP3A-219ENST00000584887 A0A087X002 238 aa12.09□□□□□ -0.47
TOP3A-219ENST00000584887 CRYGAP11844 174 aa12.09□□□□□ -0.47
TOP3A-219ENST00000584887 PFN2P35080 140 aa12.09□□□□□ -0.47
TOP3A-219ENST00000584887 IGLV5-37A0A075B6J1 123 aa12.08□□□□□ -0.48
TOP3A-219ENST00000584887 SCO1O75880 301 aa12.08□□□□□ -0.48
TOP3A-219ENST00000584887 TYMSOSQ8TAI1 123 aa12.08□□□□□ -0.48
TOP3A-219ENST00000584887 RPS10P5Q9NQ39 176 aa12.08□□□□□ -0.48
TOP3A-219ENST00000584887 IGLC3P0DOY3 106 aa12.07□□□□□ -0.48
TOP3A-219ENST00000584887 ANAPC11Q9NYG5 84 aa12.07□□□□□ -0.48
TOP3A-219ENST00000584887 IGKV2-28A0A075B6P5 120 aa12.06□□□□□ -0.48
TOP3A-219ENST00000584887 IGKV2D-28P01615 120 aa12.06□□□□□ -0.48
TOP3A-219ENST00000584887 ZNF22P17026 224 aaPredicted RBP12.04□□□□□ -0.48
TOP3A-219ENST00000584887 RHEBQ15382 184 aa12.04□□□□□ -0.48
TOP3A-219ENST00000584887 IGLV5-39A0A0G2JS06 123 aa12.03□□□□□ -0.48
TOP3A-219ENST00000584887 PMCHL1Q16048 86 aa12.03□□□□□ -0.48
TOP3A-219ENST00000584887 A0A096LNJ9 63 aa12.02□□□□□ -0.49
TOP3A-219ENST00000584887 ZNF625Q96I27 306 aaPredicted RBP12.02□□□□□ -0.49
TOP3A-219ENST00000584887 ERG28Q9UKR5 140 aa12.02□□□□□ -0.49
TOP3A-219ENST00000584887 TRAPPC1Q9Y5R8 145 aa12.02□□□□□ -0.49
TOP3A-219ENST00000584887 HBDP02042 147 aa12.01□□□□□ -0.49
TOP3A-219ENST00000584887 KRTAP13-1Q8IUC0 172 aa12.01□□□□□ -0.49
TOP3A-219ENST00000584887 C18orf32Q8TCD1 76 aa12.01□□□□□ -0.49
TOP3A-219ENST00000584887 SND1-IT1Q9HBX3 110 aa12.01□□□□□ -0.49
TOP3A-219ENST00000584887 LINC00614P0C842 121 aa12□□□□□ -0.49
TOP3A-219ENST00000584887 PRLHP81277 87 aa12□□□□□ -0.49
TOP3A-219ENST00000584887 URB1-AS1Q96HZ7 61 aa12□□□□□ -0.49
TOP3A-219ENST00000584887 VPREB1P12018 145 aa11.99□□□□□ -0.49
TOP3A-219ENST00000584887 TMEM170BQ5T4T1 132 aa11.99□□□□□ -0.49
TOP3A-219ENST00000584887 FAM19A1Q7Z5A9 133 aa11.99□□□□□ -0.49
TOP3A-219ENST00000584887 C11orf86A6NJI1 115 aa11.98□□□□□ -0.49
TOP3A-219ENST00000584887 TMEM238C9JI98 176 aa11.98□□□□□ -0.49
TOP3A-219ENST00000584887 KRTAP13-2Q52LG2 175 aa11.98□□□□□ -0.49
TOP3A-219ENST00000584887 C10orf91Q5T1B1 145 aa11.98□□□□□ -0.49
TOP3A-219ENST00000584887 BAGE3Q86Y29 109 aa11.98□□□□□ -0.49
TOP3A-219ENST00000584887 RPL24P83731 157 aaKnown RBP11.97□□□□□ -0.49
TOP3A-219ENST00000584887 TMEM126AQ9H061 195 aa11.96□□□□□ -0.49
TOP3A-219ENST00000584887 COX17Q14061 63 aa11.95□□□□□ -0.5
TOP3A-219ENST00000584887 FAM229BQ4G0N7 80 aa11.95□□□□□ -0.5
TOP3A-219ENST00000584887 IGKV2D-26A0A0A0MRZ7 120 aa11.94□□□□□ -0.5
TOP3A-219ENST00000584887 LINC00304Q8N9R0 145 aa11.94□□□□□ -0.5
TOP3A-219ENST00000584887 Q8NDZ9 215 aa11.93□□□□□ -0.5
TOP3A-219ENST00000584887 RETNLBQ9BQ08 111 aa11.93□□□□□ -0.5
TOP3A-219ENST00000584887 LINC00158P58513 81 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 87.9 ms