RNA–Protein interactions for RNA: ENST00000581849.1

CASC3-207, Transcript of CASC3, exon junction complex subunit, humanhuman

TSL 2

Gene CASC3, Length 580 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-207ENST00000581849 KIAA1644Q3SXP7 199 aa13.62□□□□□ -0.23
CASC3-207ENST00000581849 COX19Q49B96 90 aa13.62□□□□□ -0.23
CASC3-207ENST00000581849 GEMIN7Q9H840 131 aaKnown RBP13.62□□□□□ -0.23
CASC3-207ENST00000581849 TOMM7Q9P0U1 55 aa13.62□□□□□ -0.23
CASC3-207ENST00000581849 CDKN2A-AS1Q9UH64 79 aa13.62□□□□□ -0.23
CASC3-207ENST00000581849 LINC01546A6NGU7 62 aa13.61□□□□□ -0.23
CASC3-207ENST00000581849 IFITM2Q01629 132 aa13.61□□□□□ -0.23
CASC3-207ENST00000581849 C9orf129Q5T035 196 aaKnown RBP13.61□□□□□ -0.23
CASC3-207ENST00000581849 KRTAP11-1Q8IUC1 163 aa13.61□□□□□ -0.23
CASC3-207ENST00000581849 ALKBH7Q9BT30 221 aaPredicted RBP13.61□□□□□ -0.23
CASC3-207ENST00000581849 LRP2P98164 4655 aa13.6□□□□□ -0.23
CASC3-207ENST00000581849 CXCL5P42830 114 aa13.59□□□□□ -0.23
CASC3-207ENST00000581849 SCGB3A1Q96QR1 104 aa13.59□□□□□ -0.23
CASC3-207ENST00000581849 F8VRH5 84 aa13.58□□□□□ -0.24
CASC3-207ENST00000581849 H0Y9J4 135 aa13.58□□□□□ -0.24
CASC3-207ENST00000581849 UBE2BP63146 152 aa13.58□□□□□ -0.24
CASC3-207ENST00000581849 TINCRA0A1B0GVN0 87 aa13.56□□□□□ -0.24
CASC3-207ENST00000581849 IGLV5-45A0A087WSX0 123 aa13.55□□□□□ -0.24
CASC3-207ENST00000581849 PDZD11Q5EBL8 140 aa13.54□□□□□ -0.24
CASC3-207ENST00000581849 LINC00469Q8N7U9 141 aa13.54□□□□□ -0.24
CASC3-207ENST00000581849 SMIM1B2RUZ4 78 aa13.53□□□□□ -0.24
CASC3-207ENST00000581849 C10orf91Q5T1B1 145 aa13.53□□□□□ -0.24
CASC3-207ENST00000581849 RHEBQ15382 184 aa13.52□□□□□ -0.25
CASC3-207ENST00000581849 COMMD7Q86VX2 200 aa13.52□□□□□ -0.25
CASC3-207ENST00000581849 LBHQ53QV2 105 aaPredicted RBP13.51□□□□□ -0.25
CASC3-207ENST00000581849 FA2HQ7L5A8 372 aa13.51□□□□□ -0.25
CASC3-207ENST00000581849 CST9LQ9H4G1 147 aa13.51□□□□□ -0.25
CASC3-207ENST00000581849 TP73-AS1Q9UF72 201 aa13.51□□□□□ -0.25
CASC3-207ENST00000581849 CARHSP1Q9Y2V2 147 aaKnown RBP13.51□□□□□ -0.25
CASC3-207ENST00000581849 IGLV1-50A0A075B6I6 118 aa13.5□□□□□ -0.25
CASC3-207ENST00000581849 NUPR1O60356 82 aa13.5□□□□□ -0.25
CASC3-207ENST00000581849 PMVKQ15126 192 aa13.5□□□□□ -0.25
CASC3-207ENST00000581849 MRPL18Q9H0U6 180 aaKnown RBP13.5□□□□□ -0.25
CASC3-207ENST00000581849 XAGE1AQ9HD64 81 aa13.5□□□□□ -0.25
CASC3-207ENST00000581849 SMCO4Q9NRQ5 59 aa13.5□□□□□ -0.25
CASC3-207ENST00000581849 C22orf24Q9Y442 160 aa13.5□□□□□ -0.25
CASC3-207ENST00000581849 FABP9Q0Z7S8 132 aa13.49□□□□□ -0.25
CASC3-207ENST00000581849 COX7B2Q8TF08 81 aa13.49□□□□□ -0.25
CASC3-207ENST00000581849 KRTAP1-4P0C5Y4 121 aa13.48□□□□□ -0.25
CASC3-207ENST00000581849 PRR26Q8N8Z3 221 aa13.48□□□□□ -0.25
CASC3-207ENST00000581849 RPS10P5Q9NQ39 176 aa13.46□□□□□ -0.25
CASC3-207ENST00000581849 H3BRM9 83 aa13.45□□□□□ -0.26
CASC3-207ENST00000581849 ZNF861PO60384 105 aa13.45□□□□□ -0.26
CASC3-207ENST00000581849 MRPL55Q7Z7F7 128 aaKnown RBP13.44□□□□□ -0.26
CASC3-207ENST00000581849 RPL13AP40429 203 aaKnown RBP13.43□□□□□ -0.26
CASC3-207ENST00000581849 SPINK8P0C7L1 97 aa13.42□□□□□ -0.26
CASC3-207ENST00000581849 IGLC3P0DOY3 106 aa13.41□□□□□ -0.26
CASC3-207ENST00000581849 IGLV5-37A0A075B6J1 123 aa13.39□□□□□ -0.27
CASC3-207ENST00000581849 A0A096LNJ9 63 aa13.39□□□□□ -0.27
CASC3-207ENST00000581849 C18orf32Q8TCD1 76 aa13.39□□□□□ -0.27
CASC3-207ENST00000581849 TRAPPC1Q9Y5R8 145 aa13.39□□□□□ -0.27
CASC3-207ENST00000581849 IGLV5-39A0A0G2JS06 123 aa13.38□□□□□ -0.27
CASC3-207ENST00000581849 ATP5LO75964 103 aa13.38□□□□□ -0.27
CASC3-207ENST00000581849 LINC00614P0C842 121 aa13.38□□□□□ -0.27
CASC3-207ENST00000581849 BCE1O60756 84 aa13.37□□□□□ -0.27
CASC3-207ENST00000581849 HBDP02042 147 aa13.37□□□□□ -0.27
CASC3-207ENST00000581849 RPL28P46779 137 aaKnown RBP13.37□□□□□ -0.27
CASC3-207ENST00000581849 URB1-AS1Q96HZ7 61 aa13.37□□□□□ -0.27
CASC3-207ENST00000581849 RNF213Q63HN8 5207 aa13.36□□□□□ -0.27
CASC3-207ENST00000581849 RAB5BP61020 215 aa13.35□□□□□ -0.27
CASC3-207ENST00000581849 LINC00167Q96N53 147 aa13.35□□□□□ -0.27
CASC3-207ENST00000581849 ZNF22P17026 224 aaPredicted RBP13.34□□□□□ -0.27
CASC3-207ENST00000581849 NDUFA6P56556 154 aa13.33□□□□□ -0.28
CASC3-207ENST00000581849 NDUFA5Q16718 116 aa13.33□□□□□ -0.28
CASC3-207ENST00000581849 SNAPINO95295 136 aa13.32□□□□□ -0.28
CASC3-207ENST00000581849 SFTA2Q6UW10 78 aa13.32□□□□□ -0.28
CASC3-207ENST00000581849 SVBPQ8N300 66 aa13.32□□□□□ -0.28
CASC3-207ENST00000581849 NKAPP1Q8N9T2 125 aa13.32□□□□□ -0.28
CASC3-207ENST00000581849 APOC3P02656 99 aa13.31□□□□□ -0.28
CASC3-207ENST00000581849 RPL37AP8A6NKH3 93 aa13.3□□□□□ -0.28
CASC3-207ENST00000581849 COX17Q14061 63 aa13.3□□□□□ -0.28
CASC3-207ENST00000581849 ERG28Q9UKR5 140 aa13.28□□□□□ -0.28
CASC3-207ENST00000581849 GAGE10A6NGK3 116 aa13.27□□□□□ -0.29
CASC3-207ENST00000581849 PFN2P35080 140 aa13.27□□□□□ -0.29
CASC3-207ENST00000581849 PMCHL1Q16048 86 aa13.27□□□□□ -0.29
CASC3-207ENST00000581849 BAGE3Q86Y29 109 aa13.27□□□□□ -0.29
CASC3-207ENST00000581849 C11orf86A6NJI1 115 aa13.26□□□□□ -0.29
CASC3-207ENST00000581849 KRTAP13-1Q8IUC0 172 aa13.26□□□□□ -0.29
CASC3-207ENST00000581849 SND1-IT1Q9HBX3 110 aa13.25□□□□□ -0.29
CASC3-207ENST00000581849 TMEM170BQ5T4T1 132 aa13.24□□□□□ -0.29
CASC3-207ENST00000581849 CRYGAP11844 174 aa13.23□□□□□ -0.29
CASC3-207ENST00000581849 VPREB1P12018 145 aa13.23□□□□□ -0.29
CASC3-207ENST00000581849 UBE2AP49459 152 aa13.23□□□□□ -0.29
CASC3-207ENST00000581849 RPL24P83731 157 aaKnown RBP13.23□□□□□ -0.29
CASC3-207ENST00000581849 CHCHD1Q96BP2 118 aaKnown RBP13.23□□□□□ -0.29
CASC3-207ENST00000581849 LPAP08519 4548 aa13.23□□□□□ -0.29
CASC3-207ENST00000581849 YPEL4Q96NS1 127 aa13.22□□□□□ -0.29
CASC3-207ENST00000581849 ZNF625Q96I27 306 aaPredicted RBP13.21□□□□□ -0.29
CASC3-207ENST00000581849 CHTOPQ9Y3Y2 248 aaKnown RBP13.21□□□□□ -0.29
CASC3-207ENST00000581849 A0A087X002 238 aa13.2□□□□□ -0.3
CASC3-207ENST00000581849 TRAV12-1A0A0B4J245 112 aa13.2□□□□□ -0.3
CASC3-207ENST00000581849 IGKV2-28A0A075B6P5 120 aa13.19□□□□□ -0.3
CASC3-207ENST00000581849 IGKV2D-28P01615 120 aa13.19□□□□□ -0.3
CASC3-207ENST00000581849 FAM229BQ4G0N7 80 aa13.18□□□□□ -0.3
CASC3-207ENST00000581849 TYMSOSQ8TAI1 123 aa13.18□□□□□ -0.3
CASC3-207ENST00000581849 SCO1O75880 301 aa13.17□□□□□ -0.3
CASC3-207ENST00000581849 IFI27L1Q96BM0 104 aa13.17□□□□□ -0.3
CASC3-207ENST00000581849 TMEM223A0PJW6 202 aa13.16□□□□□ -0.3
CASC3-207ENST00000581849 PRR4Q16378 134 aa13.16□□□□□ -0.3
CASC3-207ENST00000581849 TMEM126AQ9H061 195 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 124.8 ms