RNA–Protein interactions for RNA: ENST00000580565.1

CSNK1D-214, Transcript of casein kinase 1 delta, humanhuman

TSL 4

Gene CSNK1D, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-214ENST00000580565 NPSP0C0P6 89 aa10.58□□□□□ -0.72
CSNK1D-214ENST00000580565 UBE2BP63146 152 aa10.58□□□□□ -0.72
CSNK1D-214ENST00000580565 K7EMI3 77 aa10.57□□□□□ -0.72
CSNK1D-214ENST00000580565 PRSS2P07478 247 aa10.57□□□□□ -0.72
CSNK1D-214ENST00000580565 CKS1BP61024 79 aa10.56□□□□□ -0.72
CSNK1D-214ENST00000580565 C6orf226Q5I0X4 101 aa10.56□□□□□ -0.72
CSNK1D-214ENST00000580565 FAM19A3Q7Z5A8 133 aa10.56□□□□□ -0.72
CSNK1D-214ENST00000580565 TOMM7Q9P0U1 55 aa10.56□□□□□ -0.72
CSNK1D-214ENST00000580565 NXT2Q9NPJ8 142 aaKnown RBP10.55□□□□□ -0.72
CSNK1D-214ENST00000580565 IGLV1-50A0A075B6I6 118 aa10.54□□□□□ -0.72
CSNK1D-214ENST00000580565 KRTAP1-4P0C5Y4 121 aa10.54□□□□□ -0.72
CSNK1D-214ENST00000580565 Q8IZM0 81 aa10.54□□□□□ -0.72
CSNK1D-214ENST00000580565 ALKBH7Q9BT30 221 aaPredicted RBP10.54□□□□□ -0.72
CSNK1D-214ENST00000580565 HERVK_113P63121 156 aa10.53□□□□□ -0.72
CSNK1D-214ENST00000580565 PAPPA-AS1Q5QFB9 102 aa10.53□□□□□ -0.72
CSNK1D-214ENST00000580565 GNB1LQ9BYB4 327 aa10.53□□□□□ -0.72
CSNK1D-214ENST00000580565 G0S2P27469 103 aa10.52□□□□□ -0.73
CSNK1D-214ENST00000580565 SEC11AP67812 179 aa10.52□□□□□ -0.73
CSNK1D-214ENST00000580565 KIAA1644Q3SXP7 199 aa10.52□□□□□ -0.73
CSNK1D-214ENST00000580565 LINC00469Q8N7U9 141 aa10.52□□□□□ -0.73
CSNK1D-214ENST00000580565 CDKN2A-AS1Q9UH64 79 aa10.52□□□□□ -0.73
CSNK1D-214ENST00000580565 COX19Q49B96 90 aa10.51□□□□□ -0.73
CSNK1D-214ENST00000580565 TIMM17AQ99595 171 aa10.51□□□□□ -0.73
CSNK1D-214ENST00000580565 GEMIN7Q9H840 131 aaKnown RBP10.51□□□□□ -0.73
CSNK1D-214ENST00000580565 C22orf24Q9Y442 160 aa10.51□□□□□ -0.73
CSNK1D-214ENST00000580565 LPAP08519 4548 aa10.51□□□□□ -0.73
CSNK1D-214ENST00000580565 TOMM6Q96B49 74 aa10.5□□□□□ -0.73
CSNK1D-214ENST00000580565 XAGE1AQ9HD64 81 aa10.5□□□□□ -0.73
CSNK1D-214ENST00000580565 F8VRH5 84 aa10.49□□□□□ -0.73
CSNK1D-214ENST00000580565 ZNF861PO60384 105 aa10.48□□□□□ -0.73
CSNK1D-214ENST00000580565 LBHQ53QV2 105 aaPredicted RBP10.48□□□□□ -0.73
CSNK1D-214ENST00000580565 MRPL18Q9H0U6 180 aaKnown RBP10.48□□□□□ -0.73
CSNK1D-214ENST00000580565 RPL13AP40429 203 aaKnown RBP10.47□□□□□ -0.73
CSNK1D-214ENST00000580565 ERASQ7Z444 233 aa10.47□□□□□ -0.73
CSNK1D-214ENST00000580565 YPEL4Q96NS1 127 aa10.47□□□□□ -0.73
CSNK1D-214ENST00000580565 SCGB3A1Q96QR1 104 aa10.47□□□□□ -0.73
CSNK1D-214ENST00000580565 NUPR1O60356 82 aa10.46□□□□□ -0.73
CSNK1D-214ENST00000580565 FABP9Q0Z7S8 132 aa10.46□□□□□ -0.73
CSNK1D-214ENST00000580565 CBLN2Q8IUK8 224 aa10.46□□□□□ -0.73
CSNK1D-214ENST00000580565 CXCL5P42830 114 aa10.45□□□□□ -0.74
CSNK1D-214ENST00000580565 SMIM1B2RUZ4 78 aa10.44□□□□□ -0.74
CSNK1D-214ENST00000580565 SMCO4Q9NRQ5 59 aa10.44□□□□□ -0.74
CSNK1D-214ENST00000580565 TP73-AS1Q9UF72 201 aa10.44□□□□□ -0.74
CSNK1D-214ENST00000580565 TRAPPC1Q9Y5R8 145 aa10.44□□□□□ -0.74
CSNK1D-214ENST00000580565 TINCRA0A1B0GVN0 87 aa10.43□□□□□ -0.74
CSNK1D-214ENST00000580565 PDZD11Q5EBL8 140 aa10.43□□□□□ -0.74
CSNK1D-214ENST00000580565 MRPL55Q7Z7F7 128 aaKnown RBP10.43□□□□□ -0.74
CSNK1D-214ENST00000580565 COX7B2Q8TF08 81 aa10.42□□□□□ -0.74
CSNK1D-214ENST00000580565 IGLV5-45A0A087WSX0 123 aa10.41□□□□□ -0.74
CSNK1D-214ENST00000580565 LINC01546A6NGU7 62 aa10.41□□□□□ -0.74
CSNK1D-214ENST00000580565 LINC01549A6NIU2 74 aa10.41□□□□□ -0.74
CSNK1D-214ENST00000580565 CST9LQ9H4G1 147 aa10.41□□□□□ -0.74
CSNK1D-214ENST00000580565 BCE1O60756 84 aa10.4□□□□□ -0.74
CSNK1D-214ENST00000580565 RPL28P46779 137 aaKnown RBP10.39□□□□□ -0.75
CSNK1D-214ENST00000580565 PRR4Q16378 134 aa10.39□□□□□ -0.75
CSNK1D-214ENST00000580565 SPINK8P0C7L1 97 aa10.38□□□□□ -0.75
CSNK1D-214ENST00000580565 LINC00167Q96N53 147 aa10.38□□□□□ -0.75
CSNK1D-214ENST00000580565 RPL37AP8A6NKH3 93 aa10.37□□□□□ -0.75
CSNK1D-214ENST00000580565 RAB5BP61020 215 aa10.37□□□□□ -0.75
CSNK1D-214ENST00000580565 PMVKQ15126 192 aa10.37□□□□□ -0.75
CSNK1D-214ENST00000580565 FA2HQ7L5A8 372 aa10.36□□□□□ -0.75
CSNK1D-214ENST00000580565 C18orf32Q8TCD1 76 aa10.36□□□□□ -0.75
CSNK1D-214ENST00000580565 GAGE10A6NGK3 116 aa10.35□□□□□ -0.75
CSNK1D-214ENST00000580565 IGLV5-37A0A075B6J1 123 aa10.34□□□□□ -0.75
CSNK1D-214ENST00000580565 A0A087X002 238 aa10.34□□□□□ -0.75
CSNK1D-214ENST00000580565 SCO1O75880 301 aa10.34□□□□□ -0.75
CSNK1D-214ENST00000580565 TSPAN13O95857 204 aa10.34□□□□□ -0.75
CSNK1D-214ENST00000580565 H3BRM9 83 aa10.33□□□□□ -0.76
CSNK1D-214ENST00000580565 CRYGAP11844 174 aa10.33□□□□□ -0.76
CSNK1D-214ENST00000580565 URB1-AS1Q96HZ7 61 aa10.33□□□□□ -0.76
CSNK1D-214ENST00000580565 COLCA2A8K830 154 aa10.32□□□□□ -0.76
CSNK1D-214ENST00000580565 ATP5LO75964 103 aa10.32□□□□□ -0.76
CSNK1D-214ENST00000580565 NKAPP1Q8N9T2 125 aa10.32□□□□□ -0.76
CSNK1D-214ENST00000580565 TYMSOSQ8TAI1 123 aa10.31□□□□□ -0.76
CSNK1D-214ENST00000580565 TRGC2P03986 189 aa10.3□□□□□ -0.76
CSNK1D-214ENST00000580565 LINC00614P0C842 121 aa10.3□□□□□ -0.76
CSNK1D-214ENST00000580565 IGLC3P0DOY3 106 aa10.3□□□□□ -0.76
CSNK1D-214ENST00000580565 KRTAP13-1Q8IUC0 172 aa10.3□□□□□ -0.76
CSNK1D-214ENST00000580565 MUC2Q02817 5179 aa10.3□□□□□ -0.76
CSNK1D-214ENST00000580565 IGLV5-39A0A0G2JS06 123 aa10.29□□□□□ -0.76
CSNK1D-214ENST00000580565 PFN2P35080 140 aa10.29□□□□□ -0.76
CSNK1D-214ENST00000580565 UBE2AP49459 152 aa10.29□□□□□ -0.76
CSNK1D-214ENST00000580565 ANAPC11Q9NYG5 84 aa10.29□□□□□ -0.76
CSNK1D-214ENST00000580565 A0A096LNJ9 63 aa10.28□□□□□ -0.76
CSNK1D-214ENST00000580565 NDUFA6P56556 154 aa10.28□□□□□ -0.76
CSNK1D-214ENST00000580565 IGKV2-28A0A075B6P5 120 aa10.26□□□□□ -0.77
CSNK1D-214ENST00000580565 IGKV2D-28P01615 120 aa10.26□□□□□ -0.77
CSNK1D-214ENST00000580565 ZNF22P17026 224 aaPredicted RBP10.26□□□□□ -0.77
CSNK1D-214ENST00000580565 PMCHL1Q16048 86 aa10.26□□□□□ -0.77
CSNK1D-214ENST00000580565 KRTAP13-2Q52LG2 175 aa10.25□□□□□ -0.77
CSNK1D-214ENST00000580565 SND1-IT1Q9HBX3 110 aa10.25□□□□□ -0.77
CSNK1D-214ENST00000580565 ERG28Q9UKR5 140 aa10.25□□□□□ -0.77
CSNK1D-214ENST00000580565 HBDP02042 147 aa10.24□□□□□ -0.77
CSNK1D-214ENST00000580565 FAM229BQ4G0N7 80 aa10.24□□□□□ -0.77
CSNK1D-214ENST00000580565 VPREB1P12018 145 aa10.23□□□□□ -0.77
CSNK1D-214ENST00000580565 COX17Q14061 63 aa10.23□□□□□ -0.77
CSNK1D-214ENST00000580565 BAGE3Q86Y29 109 aa10.23□□□□□ -0.77
CSNK1D-214ENST00000580565 CHCHD1Q96BP2 118 aaKnown RBP10.23□□□□□ -0.77
CSNK1D-214ENST00000580565 RPL24P83731 157 aaKnown RBP10.22□□□□□ -0.77
CSNK1D-214ENST00000580565 TMEM238C9JI98 176 aa10.21□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 171.9 ms