RNA–Protein interactions for RNA: ENST00000580248.5

TMCO1-207, Transcript of transmembrane and coiled-coil domains 1, humanhuman

TSL 2 BASIC

Gene TMCO1, Length 1,735 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMCO1-207ENST00000580248 C5orf38Q86SI9 138 aa12.07□□□□□ -0.48
TMCO1-207ENST00000580248 A0A0U1RRA0 63 aa12.06□□□□□ -0.48
TMCO1-207ENST00000580248 SOSTDC1Q6X4U4 206 aa12.06□□□□□ -0.48
TMCO1-207ENST00000580248 LINC01600Q96MT4 127 aa12.06□□□□□ -0.48
TMCO1-207ENST00000580248 RETNQ9HD89 108 aa12.06□□□□□ -0.48
TMCO1-207ENST00000580248 Q8IZM0 81 aa12.06□□□□□ -0.48
TMCO1-207ENST00000580248 TM2D3Q9BRN9 247 aa12.06□□□□□ -0.48
TMCO1-207ENST00000580248 H3BNG1 76 aa12.05□□□□□ -0.48
TMCO1-207ENST00000580248 CD164L2Q6UWJ8 174 aa12.05□□□□□ -0.48
TMCO1-207ENST00000580248 SPATA25Q9BR10 227 aa12.05□□□□□ -0.48
TMCO1-207ENST00000580248 XCL1P47992 114 aa12.04□□□□□ -0.48
TMCO1-207ENST00000580248 C6orf226Q5I0X4 101 aa12.04□□□□□ -0.48
TMCO1-207ENST00000580248 TEN1Q86WV5 123 aa12.04□□□□□ -0.48
TMCO1-207ENST00000580248 SLC25A20O43772 301 aa12.03□□□□□ -0.48
TMCO1-207ENST00000580248 HTN3P15516 51 aa12.03□□□□□ -0.48
TMCO1-207ENST00000580248 LINC01620Q4KN68 170 aa12.03□□□□□ -0.48
TMCO1-207ENST00000580248 LINC00269Q8N2A0 174 aa12.03□□□□□ -0.48
TMCO1-207ENST00000580248 B9D2Q9BPU9 175 aa12.03□□□□□ -0.48
TMCO1-207ENST00000580248 C9JAW5 83 aa12.03□□□□□ -0.48
TMCO1-207ENST00000580248 ANGP03950 147 aaKnown RBP12.03□□□□□ -0.48
TMCO1-207ENST00000580248 REG3AQ06141 175 aa12.03□□□□□ -0.48
TMCO1-207ENST00000580248 FOXI1Q12951 378 aa12.03□□□□□ -0.48
TMCO1-207ENST00000580248 MIR7-3HGQ8N6C7 128 aa12.03□□□□□ -0.48
TMCO1-207ENST00000580248 C11orf68Q9H3H3 251 aaKnown RBP12.03□□□□□ -0.48
TMCO1-207ENST00000580248 LINC00158P58513 81 aa12.02□□□□□ -0.49
TMCO1-207ENST00000580248 PPDPFLQ8WWR9 84 aa12.02□□□□□ -0.49
TMCO1-207ENST00000580248 TRAV13-2A0A0B4J235 113 aa12.01□□□□□ -0.49
TMCO1-207ENST00000580248 CXCL5P42830 114 aa12.01□□□□□ -0.49
TMCO1-207ENST00000580248 COX7A2LO14548 114 aa12□□□□□ -0.49
TMCO1-207ENST00000580248 TRBV10-2A0A0K0K1G8 114 aa12□□□□□ -0.49
TMCO1-207ENST00000580248 CLPSL2Q6UWE3 100 aa12□□□□□ -0.49
TMCO1-207ENST00000580248 CHCHD10Q8WYQ3 142 aaPredicted RBP12□□□□□ -0.49
TMCO1-207ENST00000580248 LST1O00453 97 aa11.99□□□□□ -0.49
TMCO1-207ENST00000580248 ANKRD29Q8N6D5 301 aa11.99□□□□□ -0.49
TMCO1-207ENST00000580248 MEGF8Q7Z7M0 2845 aa11.99□□□□□ -0.49
TMCO1-207ENST00000580248 SND1-IT1Q9HBX3 110 aa11.98□□□□□ -0.49
TMCO1-207ENST00000580248 LYPD5Q6UWN5 251 aa11.97□□□□□ -0.49
TMCO1-207ENST00000580248 H3BT86 120 aa11.97□□□□□ -0.49
TMCO1-207ENST00000580248 CFAP161Q6P656 301 aa11.97□□□□□ -0.49
TMCO1-207ENST00000580248 CRPP02741 224 aa11.96□□□□□ -0.49
TMCO1-207ENST00000580248 MALP21145 153 aa11.96□□□□□ -0.49
TMCO1-207ENST00000580248 CKS1BP61024 79 aa11.96□□□□□ -0.49
TMCO1-207ENST00000580248 COX17Q14061 63 aa11.96□□□□□ -0.49
TMCO1-207ENST00000580248 PRR34Q9NV39 138 aa11.96□□□□□ -0.49
TMCO1-207ENST00000580248 NHLRC4P0CG21 123 aaPredicted RBP11.94□□□□□ -0.5
TMCO1-207ENST00000580248 CCL18P55774 89 aa11.94□□□□□ -0.5
TMCO1-207ENST00000580248 KIAA0087Q14695 138 aa11.94□□□□□ -0.5
TMCO1-207ENST00000580248 A0A0J9YWU9 116 aa11.94□□□□□ -0.5
TMCO1-207ENST00000580248 GAGE12HA6NDE8 117 aa11.94□□□□□ -0.5
TMCO1-207ENST00000580248 PFN2P35080 140 aa11.94□□□□□ -0.5
TMCO1-207ENST00000580248 CARD19Q96LW7 228 aa11.94□□□□□ -0.5
TMCO1-207ENST00000580248 KLK5Q9Y337 293 aaPredicted RBP11.94□□□□□ -0.5
TMCO1-207ENST00000580248 RPL28P46779 137 aaKnown RBP11.93□□□□□ -0.5
TMCO1-207ENST00000580248 CLEC2BQ92478 149 aa11.93□□□□□ -0.5
TMCO1-207ENST00000580248 TRAV8-4A0A0B4J246 113 aa11.91□□□□□ -0.5
TMCO1-207ENST00000580248 PCP4P48539 62 aa11.91□□□□□ -0.5
TMCO1-207ENST00000580248 C2orf82Q6UX34 121 aa11.91□□□□□ -0.5
TMCO1-207ENST00000580248 Q8N3U1 123 aa11.91□□□□□ -0.5
TMCO1-207ENST00000580248 MUC7Q8TAX7 377 aa11.91□□□□□ -0.5
TMCO1-207ENST00000580248 TENM3Q9P273 2699 aa11.91□□□□□ -0.5
TMCO1-207ENST00000580248 IGLV10-54A0A075B6I4 117 aa11.91□□□□□ -0.5
TMCO1-207ENST00000580248 IGKV2-28A0A075B6P5 120 aa11.91□□□□□ -0.5
TMCO1-207ENST00000580248 IGKV2D-28P01615 120 aa11.91□□□□□ -0.5
TMCO1-207ENST00000580248 KLK12Q9UKR0 248 aa11.9□□□□□ -0.5
TMCO1-207ENST00000580248 TRACP01848 142 aa11.89□□□□□ -0.51
TMCO1-207ENST00000580248 Q6ZTC4 211 aa11.89□□□□□ -0.51
TMCO1-207ENST00000580248 LINC00337Q8N6G1 96 aa11.89□□□□□ -0.51
TMCO1-207ENST00000580248 ENHOQ6UWT2 76 aa11.88□□□□□ -0.51
TMCO1-207ENST00000580248 NTN5Q8WTR8 489 aaPredicted RBP11.88□□□□□ -0.51
TMCO1-207ENST00000580248 SIGMAR1Q99720 223 aa11.88□□□□□ -0.51
TMCO1-207ENST00000580248 NDUFC2O95298 119 aa11.87□□□□□ -0.51
TMCO1-207ENST00000580248 C11orf45Q8TAV5 145 aa11.87□□□□□ -0.51
TMCO1-207ENST00000580248 H0YGX0 51 aa11.86□□□□□ -0.51
TMCO1-207ENST00000580248 UBE2WQ96B02 151 aa11.86□□□□□ -0.51
TMCO1-207ENST00000580248 COL7A1Q02388 2944 aa11.86□□□□□ -0.51
TMCO1-207ENST00000580248 HUWE1Q7Z6Z7 4374 aaKnown RBP11.86□□□□□ -0.51
TMCO1-207ENST00000580248 DNAH9Q9NYC9 4486 aa11.86□□□□□ -0.51
TMCO1-207ENST00000580248 SPAG11BQ08648 103 aa11.85□□□□□ -0.51
TMCO1-207ENST00000580248 DEFB131BA0A096LNP1 70 aa11.84□□□□□ -0.51
TMCO1-207ENST00000580248 PRKDCP78527 4128 aaKnown RBP11.83□□□□□ -0.51
TMCO1-207ENST00000580248 NANOS2P60321 138 aaKnown RBP11.83□□□□□ -0.52
TMCO1-207ENST00000580248 SMIM11BQ8TCY0 68 aa11.83□□□□□ -0.52
TMCO1-207ENST00000580248 WFDC10BQ8IUB3 73 aa11.82□□□□□ -0.52
TMCO1-207ENST00000580248 GVQW2A0A096LPI5 108 aaPredicted RBP11.81□□□□□ -0.52
TMCO1-207ENST00000580248 SCGB1A1P11684 91 aa11.81□□□□□ -0.52
TMCO1-207ENST00000580248 ESRGQ1W209 222 aa11.8□□□□□ -0.52
TMCO1-207ENST00000580248 OR13C6PQ8NH95 151 aa11.8□□□□□ -0.52
TMCO1-207ENST00000580248 CDIP1Q9H305 208 aa11.8□□□□□ -0.52
TMCO1-207ENST00000580248 TEX49A0A1B0GTD5 131 aa11.8□□□□□ -0.52
TMCO1-207ENST00000580248 FBN3Q75N90 2809 aa11.79□□□□□ -0.52
TMCO1-207ENST00000580248 LINC01556Q5JQF7 62 aa11.78□□□□□ -0.52
TMCO1-207ENST00000580248 FAM218AQ96MZ4 157 aa11.78□□□□□ -0.52
TMCO1-207ENST00000580248 TRAV10A0A0B4J240 114 aa11.77□□□□□ -0.52
TMCO1-207ENST00000580248 UNQ6190/PRO20217Q6UXQ8 127 aa11.77□□□□□ -0.52
TMCO1-207ENST00000580248 TMEM126AQ9H061 195 aa11.77□□□□□ -0.52
TMCO1-207ENST00000580248 C15orf53Q8NAA6 179 aa11.77□□□□□ -0.53
TMCO1-207ENST00000580248 BAALC-AS2P0C853 105 aa11.76□□□□□ -0.53
TMCO1-207ENST00000580248 C6orf223Q8N319 242 aa11.76□□□□□ -0.53
TMCO1-207ENST00000580248 DNAL4O96015 105 aa11.75□□□□□ -0.53
TMCO1-207ENST00000580248 C9orf116Q5BN46 136 aaPredicted RBP11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms