RNA–Protein interactions for RNA: ENST00000580095.5

TOP3A-209, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 1 (best)

Gene TOP3A, Length 2,929 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-209ENST00000580095 TRBV7-7A0A0K0K1E9 115 aa7.37□□□□□ -1.23
TOP3A-209ENST00000580095 UQCRQO14949 82 aa7.37□□□□□ -1.23
TOP3A-209ENST00000580095 COX6CP09669 75 aa7.37□□□□□ -1.23
TOP3A-209ENST00000580095 C16orf95Q9H693 158 aa7.37□□□□□ -1.23
TOP3A-209ENST00000580095 HILS1P60008 231 aa7.36□□□□□ -1.23
TOP3A-209ENST00000580095 OXLD1Q5BKU9 147 aa7.36□□□□□ -1.23
TOP3A-209ENST00000580095 TRBV10-2A0A0K0K1G8 114 aa7.36□□□□□ -1.23
TOP3A-209ENST00000580095 CYSTM1Q9H1C7 97 aa7.35□□□□□ -1.23
TOP3A-209ENST00000580095 TRBV6-8A0A0A6YYG3 113 aa7.35□□□□□ -1.23
TOP3A-209ENST00000580095 TIMM17BO60830 172 aa7.35□□□□□ -1.23
TOP3A-209ENST00000580095 TRBV6-4A0A1B0GX49 114 aa7.34□□□□□ -1.23
TOP3A-209ENST00000580095 MALP21145 153 aa7.34□□□□□ -1.23
TOP3A-209ENST00000580095 PFN2P35080 140 aa7.34□□□□□ -1.23
TOP3A-209ENST00000580095 DPH3Q96FX2 82 aa7.34□□□□□ -1.23
TOP3A-209ENST00000580095 Q8N3U1 123 aa7.34□□□□□ -1.23
TOP3A-209ENST00000580095 MIR7-3HGQ8N6C7 128 aa7.34□□□□□ -1.23
TOP3A-209ENST00000580095 PRO0628Q9UI54 55 aa7.34□□□□□ -1.23
TOP3A-209ENST00000580095 LST1O00453 97 aa7.34□□□□□ -1.24
TOP3A-209ENST00000580095 GYPEP15421 78 aa7.34□□□□□ -1.24
TOP3A-209ENST00000580095 UBE2WQ96B02 151 aa7.34□□□□□ -1.24
TOP3A-209ENST00000580095 OVOL2Q9BRP0 275 aa7.34□□□□□ -1.24
TOP3A-209ENST00000580095 XCL1P47992 114 aa7.33□□□□□ -1.24
TOP3A-209ENST00000580095 C1orf43Q9BWL3 253 aa7.33□□□□□ -1.24
TOP3A-209ENST00000580095 FLNBO75369 2602 aaKnown RBP7.33□□□□□ -1.24
TOP3A-209ENST00000580095 LINC00158P58513 81 aa7.33□□□□□ -1.24
TOP3A-209ENST00000580095 GAGE2AQ6NT46 116 aa7.33□□□□□ -1.24
TOP3A-209ENST00000580095 COX7B2Q8TF08 81 aa7.33□□□□□ -1.24
TOP3A-209ENST00000580095 PKIGQ9Y2B9 76 aa7.32□□□□□ -1.24
TOP3A-209ENST00000580095 LY6G6DO95868 133 aa7.32□□□□□ -1.24
TOP3A-209ENST00000580095 DEFB135Q30KP9 77 aa7.31□□□□□ -1.24
TOP3A-209ENST00000580095 FAM218AQ96MZ4 157 aa7.31□□□□□ -1.24
TOP3A-209ENST00000580095 INAFM1C9JVW0 142 aa7.31□□□□□ -1.24
TOP3A-209ENST00000580095 CRYGAP11844 174 aa7.31□□□□□ -1.24
TOP3A-209ENST00000580095 CMC4P56277 68 aaPredicted RBP7.31□□□□□ -1.24
TOP3A-209ENST00000580095 C2orf48Q96LS8 159 aa7.31□□□□□ -1.24
TOP3A-209ENST00000580095 DSCR8Q96T75 97 aa7.31□□□□□ -1.24
TOP3A-209ENST00000580095 Q9HAA7 133 aa7.31□□□□□ -1.24
TOP3A-209ENST00000580095 IGHV3OR16-9A0A0B4J2B5 98 aa7.31□□□□□ -1.24
TOP3A-209ENST00000580095 LINC00336Q6ZUF6 198 aa7.31□□□□□ -1.24
TOP3A-209ENST00000580095 FAM19A3Q7Z5A8 133 aa7.31□□□□□ -1.24
TOP3A-209ENST00000580095 PKD1L1Q8TDX9 2849 aa7.3□□□□□ -1.24
TOP3A-209ENST00000580095 FAM222AQ5U5X8 452 aa7.3□□□□□ -1.24
TOP3A-209ENST00000580095 LINC00337Q8N6G1 96 aa7.3□□□□□ -1.24
TOP3A-209ENST00000580095 IGLV10-54A0A075B6I4 117 aa7.3□□□□□ -1.24
TOP3A-209ENST00000580095 X6R8D5 127 aa7.3□□□□□ -1.24
TOP3A-209ENST00000580095 hADV29S1A0JD25 119 aa7.29□□□□□ -1.24
TOP3A-209ENST00000580095 COX7CP15954 63 aa7.29□□□□□ -1.24
TOP3A-209ENST00000580095 IGKV2-28A0A075B6P5 120 aa7.29□□□□□ -1.24
TOP3A-209ENST00000580095 LINC00959A0A1B0GUT2 108 aa7.29□□□□□ -1.24
TOP3A-209ENST00000580095 IGKV2D-28P01615 120 aa7.29□□□□□ -1.24
TOP3A-209ENST00000580095 SND1-IT1Q9HBX3 110 aa7.29□□□□□ -1.24
TOP3A-209ENST00000580095 COX7A2LO14548 114 aa7.28□□□□□ -1.24
TOP3A-209ENST00000580095 HTN3P15516 51 aa7.28□□□□□ -1.24
TOP3A-209ENST00000580095 LINC01600Q96MT4 127 aa7.28□□□□□ -1.24
TOP3A-209ENST00000580095 H3BT86 120 aa7.27□□□□□ -1.25
TOP3A-209ENST00000580095 CCL18P55774 89 aa7.27□□□□□ -1.25
TOP3A-209ENST00000580095 C6orf226Q5I0X4 101 aa7.27□□□□□ -1.25
TOP3A-209ENST00000580095 V9GYY9 64 aa7.27□□□□□ -1.25
TOP3A-209ENST00000580095 CRPP02741 224 aa7.27□□□□□ -1.25
TOP3A-209ENST00000580095 ATP5G1P05496 136 aa7.27□□□□□ -1.25
TOP3A-209ENST00000580095 PRR3P79522 188 aaKnown RBP7.27□□□□□ -1.25
TOP3A-209ENST00000580095 PAX4O43316 350 aa7.26□□□□□ -1.25
TOP3A-209ENST00000580095 A0A087WZ39 114 aa7.26□□□□□ -1.25
TOP3A-209ENST00000580095 TMEM258P61165 79 aa7.26□□□□□ -1.25
TOP3A-209ENST00000580095 LINC00269Q8N2A0 174 aa7.26□□□□□ -1.25
TOP3A-209ENST00000580095 IMUPQ9GZP8 106 aa7.26□□□□□ -1.25
TOP3A-209ENST00000580095 FAM240AA0A1B0GVK7 77 aa7.25□□□□□ -1.25
TOP3A-209ENST00000580095 BAALC-AS2P0C853 105 aa7.25□□□□□ -1.25
TOP3A-209ENST00000580095 STAB1Q9NY15 2570 aa7.25□□□□□ -1.25
TOP3A-209ENST00000580095 SMIM11BQ8TCY0 68 aa7.25□□□□□ -1.25
TOP3A-209ENST00000580095 CELA1Q9UNI1 258 aa7.25□□□□□ -1.25
TOP3A-209ENST00000580095 A0A087WYN8 130 aa7.24□□□□□ -1.25
TOP3A-209ENST00000580095 TRACP01848 142 aa7.24□□□□□ -1.25
TOP3A-209ENST00000580095 PRO0255Q9UI72 69 aa7.24□□□□□ -1.25
TOP3A-209ENST00000580095 C9orf116Q5BN46 136 aaPredicted RBP7.24□□□□□ -1.25
TOP3A-209ENST00000580095 IGHV4-28A0A0C4DH34 117 aa7.24□□□□□ -1.25
TOP3A-209ENST00000580095 FAM236DA0A1B0GTK5 79 aa7.24□□□□□ -1.25
TOP3A-209ENST00000580095 FAM236CP0DP71 79 aa7.24□□□□□ -1.25
TOP3A-209ENST00000580095 COPS9Q8WXC6 57 aa7.24□□□□□ -1.25
TOP3A-209ENST00000580095 ANGP03950 147 aaKnown RBP7.23□□□□□ -1.25
TOP3A-209ENST00000580095 C9orf129Q5T035 196 aaKnown RBP7.23□□□□□ -1.25
TOP3A-209ENST00000580095 C22orf24Q9Y442 160 aa7.23□□□□□ -1.25
TOP3A-209ENST00000580095 NOTCH1P46531 2555 aa7.23□□□□□ -1.25
TOP3A-209ENST00000580095 SLPIP03973 132 aa7.23□□□□□ -1.25
TOP3A-209ENST00000580095 SMCR5Q8TEV8 140 aa7.23□□□□□ -1.25
TOP3A-209ENST00000580095 FBN1P35555 2871 aaKnown RBP7.22□□□□□ -1.25
TOP3A-209ENST00000580095 SS18Q15532 418 aa7.22□□□□□ -1.25
TOP3A-209ENST00000580095 F8P00451 2351 aa7.22□□□□□ -1.25
TOP3A-209ENST00000580095 TRAV13-2A0A0B4J235 113 aa7.22□□□□□ -1.25
TOP3A-209ENST00000580095 LINC00612Q8N6U2 182 aa7.22□□□□□ -1.25
TOP3A-209ENST00000580095 DAD1P61803 113 aa7.21□□□□□ -1.26
TOP3A-209ENST00000580095 TENM3Q9P273 2699 aa7.21□□□□□ -1.26
TOP3A-209ENST00000580095 MAST4O15021 2626 aa7.21□□□□□ -1.26
TOP3A-209ENST00000580095 IBA57-AS1B1ANH7 110 aa7.21□□□□□ -1.26
TOP3A-209ENST00000580095 RPL28P46779 137 aaKnown RBP7.2□□□□□ -1.26
TOP3A-209ENST00000580095 DEFB121Q5J5C9 76 aa7.2□□□□□ -1.26
TOP3A-209ENST00000580095 UPK3BQ9BT76 320 aa7.2□□□□□ -1.26
TOP3A-209ENST00000580095 LECT2O14960 151 aa7.2□□□□□ -1.26
TOP3A-209ENST00000580095 CHCHD10Q8WYQ3 142 aaPredicted RBP7.2□□□□□ -1.26
TOP3A-209ENST00000580095 HIST1H4AP62805 103 aaKnown RBP7.19□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms