RNA–Protein interactions for RNA: ENST00000577539.1

VAPA-203, Transcript of VAMP associated protein A, humanhuman

Gene VAPA, Length 3,760 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-203ENST00000577539 DEFB4AO15263 64 aa3.76□□□□□ -1.81
VAPA-203ENST00000577539 LCE4AQ5TA78 99 aa3.76□□□□□ -1.81
VAPA-203ENST00000577539 SOSTDC1Q6X4U4 206 aa3.76□□□□□ -1.81
VAPA-203ENST00000577539 MIR7-3HGQ8N6C7 128 aa3.76□□□□□ -1.81
VAPA-203ENST00000577539 OR13C6PQ8NH95 151 aa3.76□□□□□ -1.81
VAPA-203ENST00000577539 KRTAP9-6A0A140TA67 174 aa3.76□□□□□ -1.81
VAPA-203ENST00000577539 KRTAP9-7A8MTY7 169 aa3.76□□□□□ -1.81
VAPA-203ENST00000577539 LST1O00453 97 aa3.76□□□□□ -1.81
VAPA-203ENST00000577539 CRPP02741 224 aa3.76□□□□□ -1.81
VAPA-203ENST00000577539 C15orf53Q8NAA6 179 aa3.76□□□□□ -1.81
VAPA-203ENST00000577539 MRAPQ8TCY5 172 aa3.76□□□□□ -1.81
VAPA-203ENST00000577539 COX7B2Q8TF08 81 aa3.76□□□□□ -1.81
VAPA-203ENST00000577539 TRBV6-4A0A1B0GX49 114 aa3.76□□□□□ -1.81
VAPA-203ENST00000577539 XCL1P47992 114 aa3.76□□□□□ -1.81
VAPA-203ENST00000577539 TRBV6-8A0A0A6YYG3 113 aa3.75□□□□□ -1.81
VAPA-203ENST00000577539 H3BT86 120 aa3.75□□□□□ -1.81
VAPA-203ENST00000577539 PAX4O43316 350 aa3.75□□□□□ -1.81
VAPA-203ENST00000577539 TTC32Q5I0X7 151 aa3.75□□□□□ -1.81
VAPA-203ENST00000577539 ANAPC13Q9BS18 74 aa3.75□□□□□ -1.81
VAPA-203ENST00000577539 RETNQ9HD89 108 aa3.75□□□□□ -1.81
VAPA-203ENST00000577539 UNC79Q9P2D8 2635 aa3.75□□□□□ -1.81
VAPA-203ENST00000577539 PLAC8L1A1L4L8 177 aa3.75□□□□□ -1.81
VAPA-203ENST00000577539 J3QKU1 62 aa3.75□□□□□ -1.81
VAPA-203ENST00000577539 HTN3P15516 51 aa3.75□□□□□ -1.81
VAPA-203ENST00000577539 FHL2Q14192 279 aa3.75□□□□□ -1.81
VAPA-203ENST00000577539 SND1-IT1Q9HBX3 110 aa3.75□□□□□ -1.81
VAPA-203ENST00000577539 F5H768 121 aa3.75□□□□□ -1.81
VAPA-203ENST00000577539 KRTAP1-1Q07627 177 aa3.75□□□□□ -1.81
VAPA-203ENST00000577539 COX7A2LO14548 114 aa3.74□□□□□ -1.81
VAPA-203ENST00000577539 HILS1P60008 231 aa3.74□□□□□ -1.81
VAPA-203ENST00000577539 Q9HAA7 133 aa3.74□□□□□ -1.81
VAPA-203ENST00000577539 DNAL4O96015 105 aa3.74□□□□□ -1.81
VAPA-203ENST00000577539 BAALC-AS2P0C853 105 aa3.74□□□□□ -1.81
VAPA-203ENST00000577539 XP32Q5T750 250 aa3.74□□□□□ -1.81
VAPA-203ENST00000577539 C16orf95Q9H693 158 aa3.74□□□□□ -1.81
VAPA-203ENST00000577539 IGLV10-54A0A075B6I4 117 aa3.73□□□□□ -1.81
VAPA-203ENST00000577539 DEFB135Q30KP9 77 aa3.73□□□□□ -1.81
VAPA-203ENST00000577539 CSNK1G2-AS1Q8NCQ2 148 aa3.73□□□□□ -1.81
VAPA-203ENST00000577539 OVOL2Q9BRP0 275 aa3.73□□□□□ -1.81
VAPA-203ENST00000577539 ATRQ13535 2644 aa3.73□□□□□ -1.81
VAPA-203ENST00000577539 TRAV13-2A0A0B4J235 113 aa3.73□□□□□ -1.81
VAPA-203ENST00000577539 SS18Q15532 418 aa3.73□□□□□ -1.81
VAPA-203ENST00000577539 SMIM20Q8N5G0 67 aa3.73□□□□□ -1.81
VAPA-203ENST00000577539 KIR2DL5BQ8NHK3 375 aa3.73□□□□□ -1.81
VAPA-203ENST00000577539 V9GYY9 64 aa3.73□□□□□ -1.81
VAPA-203ENST00000577539 FAM222AQ5U5X8 452 aa3.73□□□□□ -1.81
VAPA-203ENST00000577539 Q8N1X5 172 aa3.73□□□□□ -1.81
VAPA-203ENST00000577539 LINC00959A0A1B0GUT2 108 aa3.72□□□□□ -1.81
VAPA-203ENST00000577539 IGHV3OR16-9A0A0B4J2B5 98 aa3.72□□□□□ -1.81
VAPA-203ENST00000577539 ATP5G1P05496 136 aa3.72□□□□□ -1.81
VAPA-203ENST00000577539 CCL18P55774 89 aa3.72□□□□□ -1.81
VAPA-203ENST00000577539 LINC00337Q8N6G1 96 aa3.72□□□□□ -1.81
VAPA-203ENST00000577539 ANGP03950 147 aaKnown RBP3.72□□□□□ -1.81
VAPA-203ENST00000577539 SPATA3Q8NHX4 192 aa3.72□□□□□ -1.81
VAPA-203ENST00000577539 PRO0255Q9UI72 69 aa3.72□□□□□ -1.81
VAPA-203ENST00000577539 LY6G6DO95868 133 aa3.71□□□□□ -1.82
VAPA-203ENST00000577539 C11orf45Q8TAV5 145 aa3.71□□□□□ -1.82
VAPA-203ENST00000577539 FAM218AQ96MZ4 157 aa3.71□□□□□ -1.82
VAPA-203ENST00000577539 KRTAP10-3P60369 221 aa3.71□□□□□ -1.82
VAPA-203ENST00000577539 DAD1P61803 113 aa3.71□□□□□ -1.82
VAPA-203ENST00000577539 FAM19A3Q7Z5A8 133 aa3.71□□□□□ -1.82
VAPA-203ENST00000577539 LINC00269Q8N2A0 174 aa3.71□□□□□ -1.82
VAPA-203ENST00000577539 A0A087WZ39 114 aa3.71□□□□□ -1.82
VAPA-203ENST00000577539 INAFM1C9JVW0 142 aa3.71□□□□□ -1.82
VAPA-203ENST00000577539 SMIM11BQ8TCY0 68 aa3.71□□□□□ -1.82
VAPA-203ENST00000577539 IBA57-AS1B1ANH7 110 aa3.7□□□□□ -1.82
VAPA-203ENST00000577539 LECT2O14960 151 aa3.7□□□□□ -1.82
VAPA-203ENST00000577539 SS18L2Q9UHA2 77 aa3.7□□□□□ -1.82
VAPA-203ENST00000577539 TRACP01848 142 aa3.7□□□□□ -1.82
VAPA-203ENST00000577539 IGKV2-28A0A075B6P5 120 aa3.69□□□□□ -1.82
VAPA-203ENST00000577539 IGKV2D-28P01615 120 aa3.69□□□□□ -1.82
VAPA-203ENST00000577539 SLPIP03973 132 aa3.69□□□□□ -1.82
VAPA-203ENST00000577539 NDUFV3P56181 108 aaKnown RBP3.69□□□□□ -1.82
VAPA-203ENST00000577539 PRR3P79522 188 aaKnown RBP3.69□□□□□ -1.82
VAPA-203ENST00000577539 TENM4Q6N022 2769 aa3.69□□□□□ -1.82
VAPA-203ENST00000577539 ZNF469Q96JG9 3925 aaPredicted RBP3.69□□□□□ -1.82
VAPA-203ENST00000577539 C9orf66Q5T8R8 295 aa3.69□□□□□ -1.82
VAPA-203ENST00000577539 A0A087WYN8 130 aa3.69□□□□□ -1.82
VAPA-203ENST00000577539 IGHV4-28A0A0C4DH34 117 aa3.69□□□□□ -1.82
VAPA-203ENST00000577539 RPL28P46779 137 aaKnown RBP3.69□□□□□ -1.82
VAPA-203ENST00000577539 LINC00526Q96FQ7 95 aa3.69□□□□□ -1.82
VAPA-203ENST00000577539 CHCHD10Q8WYQ3 142 aaPredicted RBP3.68□□□□□ -1.82
VAPA-203ENST00000577539 INAFM2P0DMQ5 153 aa3.68□□□□□ -1.82
VAPA-203ENST00000577539 APOC4P55056 127 aa3.68□□□□□ -1.82
VAPA-203ENST00000577539 C9orf116Q5BN46 136 aaPredicted RBP3.68□□□□□ -1.82
VAPA-203ENST00000577539 KRTAP4-12Q9BQ66 201 aa3.68□□□□□ -1.82
VAPA-203ENST00000577539 SMIM9A6NGZ8 99 aa3.68□□□□□ -1.82
VAPA-203ENST00000577539 REG3AQ06141 175 aa3.68□□□□□ -1.82
VAPA-203ENST00000577539 KRTAP19-4Q3LI73 84 aa3.68□□□□□ -1.82
VAPA-203ENST00000577539 C14orf132Q9NPU4 83 aa3.68□□□□□ -1.82
VAPA-203ENST00000577539 LOC100996750A0A140TA64 210 aa3.67□□□□□ -1.82
VAPA-203ENST00000577539 H0YGX0 51 aa3.67□□□□□ -1.82
VAPA-203ENST00000577539 KRTAP4-6Q9BYQ5 205 aa3.67□□□□□ -1.82
VAPA-203ENST00000577539 FAM240AA0A1B0GVK7 77 aa3.67□□□□□ -1.82
VAPA-203ENST00000577539 LYRM9A8MSI8 78 aa3.67□□□□□ -1.82
VAPA-203ENST00000577539 LINC01600Q96MT4 127 aa3.67□□□□□ -1.82
VAPA-203ENST00000577539 KLK12Q9UKR0 248 aa3.67□□□□□ -1.82
VAPA-203ENST00000577539 FLNBO75369 2602 aaKnown RBP3.67□□□□□ -1.82
VAPA-203ENST00000577539 FAM236AA0A1B0GUQ0 79 aa3.67□□□□□ -1.82
VAPA-203ENST00000577539 FAM236BA0A1B0GV22 79 aa3.67□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 72.3 ms