RNA–Protein interactions for RNA: ENST00000576484.1

CDC27-219, Transcript of cell division cycle 27, humanhuman

TSL 5

Gene CDC27, Length 548 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC27-219ENST00000576484 MUC12Q9UKN1 5478 aa-0.09□□□□□ -2.42
CDC27-219ENST00000576484 HSPG2P98160 4391 aa-0.09□□□□□ -2.42
CDC27-219ENST00000576484 URB1O60287 2271 aaKnown RBP-0.1□□□□□ -2.42
CDC27-219ENST00000576484 SETBP1Q9Y6X0 1596 aa-0.1□□□□□ -2.42
CDC27-219ENST00000576484 DSTQ03001 7570 aaKnown RBP-0.1□□□□□ -2.43
CDC27-219ENST00000576484 CSPG4Q6UVK1 2322 aa-0.1□□□□□ -2.43
CDC27-219ENST00000576484 GNGT2O14610 69 aa-0.1□□□□□ -2.43
CDC27-219ENST00000576484 RBP2P50120 134 aa-0.1□□□□□ -2.43
CDC27-219ENST00000576484 CACFD1Q9UGQ2 172 aa-0.1□□□□□ -2.43
CDC27-219ENST00000576484 CHD8Q9HCK8 2581 aa-0.1□□□□□ -2.43
CDC27-219ENST00000576484 MAP1BP46821 2468 aaKnown RBP-0.11□□□□□ -2.43
CDC27-219ENST00000576484 PRDM15P57071 1507 aaPredicted RBP-0.11□□□□□ -2.43
CDC27-219ENST00000576484 ATP6V1G2-DDX39BF2Z307 99 aa-0.11□□□□□ -2.43
CDC27-219ENST00000576484 K7EQZ3 153 aa-0.11□□□□□ -2.43
CDC27-219ENST00000576484 SPRR2DP22532 72 aa-0.11□□□□□ -2.43
CDC27-219ENST00000576484 VAMP8Q9BV40 100 aa-0.11□□□□□ -2.43
CDC27-219ENST00000576484 ABCA3Q99758 1704 aa-0.11□□□□□ -2.43
CDC27-219ENST00000576484 A0A0G2JMZ2 1700 aa-0.12□□□□□ -2.43
CDC27-219ENST00000576484 NUP188Q5SRE5 1749 aa-0.12□□□□□ -2.43
CDC27-219ENST00000576484 XRN1Q8IZH2 1706 aaKnown RBP-0.12□□□□□ -2.43
CDC27-219ENST00000576484 TRBV25-1A0A075B6N4 114 aa-0.12□□□□□ -2.43
CDC27-219ENST00000576484 C7orf77A4D0Y5 90 aa-0.12□□□□□ -2.43
CDC27-219ENST00000576484 PRM1P04553 51 aa-0.12□□□□□ -2.43
CDC27-219ENST00000576484 PLEKHH2Q8IVE3 1493 aa-0.12□□□□□ -2.43
CDC27-219ENST00000576484 MLH3Q9UHC1 1453 aa-0.12□□□□□ -2.43
CDC27-219ENST00000576484 TENM2Q9NT68 2774 aa-0.12□□□□□ -2.43
CDC27-219ENST00000576484 PRKDCP78527 4128 aaKnown RBP-0.13□□□□□ -2.43
CDC27-219ENST00000576484 A0A087WVE0 104 aa-0.13□□□□□ -2.43
CDC27-219ENST00000576484 A0A0G2JND7 137 aa-0.13□□□□□ -2.43
CDC27-219ENST00000576484 MPC2O95563 127 aa-0.13□□□□□ -2.43
CDC27-219ENST00000576484 MT-ATP8P03928 68 aa-0.13□□□□□ -2.43
CDC27-219ENST00000576484 S100A10P60903 97 aa-0.13□□□□□ -2.43
CDC27-219ENST00000576484 PMCHL1Q16048 86 aa-0.13□□□□□ -2.43
CDC27-219ENST00000576484 KRTAP6-1Q3LI64 71 aa-0.13□□□□□ -2.43
CDC27-219ENST00000576484 ACBD7Q8N6N7 88 aa-0.13□□□□□ -2.43
CDC27-219ENST00000576484 USMG5Q96IX5 58 aa-0.13□□□□□ -2.43
CDC27-219ENST00000576484 TSC2P49815 1807 aa-0.14□□□□□ -2.43
CDC27-219ENST00000576484 H7BZZ5 65 aa-0.14□□□□□ -2.43
CDC27-219ENST00000576484 TRGV9Q99603 122 aa-0.14□□□□□ -2.43
CDC27-219ENST00000576484 KIAA0556O60303 1618 aa-0.14□□□□□ -2.43
CDC27-219ENST00000576484 PDCD11Q14690 1871 aaKnown RBP-0.14□□□□□ -2.43
CDC27-219ENST00000576484 NLRP1Q9C000 1473 aa-0.15□□□□□ -2.43
CDC27-219ENST00000576484 EP300Q09472 2414 aaPredicted RBP-0.15□□□□□ -2.43
CDC27-219ENST00000576484 LRP2P98164 4655 aa-0.15□□□□□ -2.43
CDC27-219ENST00000576484 ANKRD36BQ8N2N9 1353 aa-0.15□□□□□ -2.43
CDC27-219ENST00000576484 ZANQ9Y493 2812 aa-0.15□□□□□ -2.43
CDC27-219ENST00000576484 ALMS1Q8TCU4 4167 aa-0.15□□□□□ -2.43
CDC27-219ENST00000576484 H3BQF6 201 aa-0.15□□□□□ -2.43
CDC27-219ENST00000576484 ATOX1O00244 68 aa-0.15□□□□□ -2.43
CDC27-219ENST00000576484 COX8AP10176 69 aa-0.15□□□□□ -2.43
CDC27-219ENST00000576484 PSMG4Q5JS54 123 aa-0.15□□□□□ -2.43
CDC27-219ENST00000576484 PMCHL2Q9BQD1 86 aa-0.15□□□□□ -2.43
CDC27-219ENST00000576484 AP4S1Q9Y587 144 aa-0.15□□□□□ -2.43
CDC27-219ENST00000576484 CNTLNQ9NXG0 1405 aa-0.15□□□□□ -2.43
CDC27-219ENST00000576484 TEX14Q8IWB6 1497 aa-0.16□□□□□ -2.43
CDC27-219ENST00000576484 WNK1Q9H4A3 2382 aa-0.16□□□□□ -2.43
CDC27-219ENST00000576484 APC2O95996 2303 aa-0.16□□□□□ -2.43
CDC27-219ENST00000576484 A0A1B0GU69 56 aa-0.16□□□□□ -2.44
CDC27-219ENST00000576484 SPINK4O60575 86 aa-0.16□□□□□ -2.44
CDC27-219ENST00000576484 LINC00032P0C843 101 aa-0.16□□□□□ -2.44
CDC27-219ENST00000576484 SERP2Q8N6R1 65 aa-0.16□□□□□ -2.44
CDC27-219ENST00000576484 HECTD4Q9Y4D8 3996 aa-0.16□□□□□ -2.44
CDC27-219ENST00000576484 FYCO1Q9BQS8 1478 aa-0.16□□□□□ -2.44
CDC27-219ENST00000576484 SYS1-DBNDD2H3BUS1 97 aa-0.17□□□□□ -2.44
CDC27-219ENST00000576484 UQCRHP07919 91 aa-0.17□□□□□ -2.44
CDC27-219ENST00000576484 C6orf201Q7Z4U5 140 aa-0.17□□□□□ -2.44
CDC27-219ENST00000576484 DPY30Q9C005 99 aa-0.17□□□□□ -2.44
CDC27-219ENST00000576484 DNAJC13O75165 2243 aa-0.17□□□□□ -2.44
CDC27-219ENST00000576484 EDC4Q6P2E9 1401 aaKnown RBP-0.18□□□□□ -2.44
CDC27-219ENST00000576484 H0Y9P7 68 aa-0.18□□□□□ -2.44
CDC27-219ENST00000576484 ASIPP42127 132 aa-0.18□□□□□ -2.44
CDC27-219ENST00000576484 CCDC141Q6ZP82 1450 aa-0.18□□□□□ -2.44
CDC27-219ENST00000576484 MAP1AP78559 2803 aaPredicted RBP-0.19□□□□□ -2.44
CDC27-219ENST00000576484 DEFB105AQ8NG35 78 aa-0.19□□□□□ -2.44
CDC27-219ENST00000576484 RAPGEF2Q9Y4G8 1499 aa-0.19□□□□□ -2.44
CDC27-219ENST00000576484 MUC2Q02817 5179 aa-0.19□□□□□ -2.44
CDC27-219ENST00000576484 ABCC2Q92887 1545 aa-0.19□□□□□ -2.44
CDC27-219ENST00000576484 STAB1Q9NY15 2570 aa-0.19□□□□□ -2.44
CDC27-219ENST00000576484 LRP1BQ9NZR2 4599 aa-0.2□□□□□ -2.44
CDC27-219ENST00000576484 NCMAPQ5T1S8 102 aa-0.2□□□□□ -2.44
CDC27-219ENST00000576484 DEFB107AQ8IZN7 70 aa-0.2□□□□□ -2.44
CDC27-219ENST00000576484 FXYD6Q9H0Q3 95 aa-0.2□□□□□ -2.44
CDC27-219ENST00000576484 COL6A3P12111 3177 aa-0.2□□□□□ -2.44
CDC27-219ENST00000576484 VPS8Q8N3P4 1428 aa-0.21□□□□□ -2.44
CDC27-219ENST00000576484 HERC1Q15751 4861 aa-0.21□□□□□ -2.44
CDC27-219ENST00000576484 M0R143 59 aa-0.21□□□□□ -2.44
CDC27-219ENST00000576484 ARMS2P0C7Q2 107 aa-0.21□□□□□ -2.44
CDC27-219ENST00000576484 GNGT1P63211 74 aa-0.21□□□□□ -2.44
CDC27-219ENST00000576484 FAT1Q14517 4588 aa-0.21□□□□□ -2.44
CDC27-219ENST00000576484 FLNBO75369 2602 aaKnown RBP-0.21□□□□□ -2.44
CDC27-219ENST00000576484 PAPPA2Q9BXP8 1791 aa-0.22□□□□□ -2.44
CDC27-219ENST00000576484 NRXN1Q9ULB1 1477 aa-0.22□□□□□ -2.44
CDC27-219ENST00000576484 KMT2CQ8NEZ4 4911 aaKnown RBP-0.22□□□□□ -2.44
CDC27-219ENST00000576484 TARBP1Q13395 1621 aaKnown RBP-0.22□□□□□ -2.44
CDC27-219ENST00000576484 TRBV7-7A0A0K0K1E9 115 aa-0.22□□□□□ -2.44
CDC27-219ENST00000576484 HMGN3Q15651 99 aa-0.22□□□□□ -2.44
CDC27-219ENST00000576484 KLK9Q2XQG4 91 aa-0.22□□□□□ -2.44
CDC27-219ENST00000576484 COL5A1-AS1Q5SY13 56 aa-0.22□□□□□ -2.44
CDC27-219ENST00000576484 CRIPTQ9P021 101 aa-0.22□□□□□ -2.44
CDC27-219ENST00000576484 ACANP16112 2415 aa-0.22□□□□□ -2.44
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms