RNA–Protein interactions for RNA: ENST00000573852.5

SCARF1-206, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best)

Gene SCARF1, Length 2,698 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-206ENST00000573852 FN1P02751 2386 aaKnown RBP13.25□□□□□ -0.29
SCARF1-206ENST00000573852 LECT2O14960 151 aa13.25□□□□□ -0.29
SCARF1-206ENST00000573852 OR13C6PQ8NH95 151 aa13.25□□□□□ -0.29
SCARF1-206ENST00000573852 C14orf132Q9NPU4 83 aa13.25□□□□□ -0.29
SCARF1-206ENST00000573852 MTORP42345 2549 aa13.24□□□□□ -0.29
SCARF1-206ENST00000573852 XCL1P47992 114 aa13.24□□□□□ -0.29
SCARF1-206ENST00000573852 C16orf95Q9H693 158 aa13.24□□□□□ -0.29
SCARF1-206ENST00000573852 ANK3Q12955 4377 aaKnown RBP13.22□□□□□ -0.29
SCARF1-206ENST00000573852 SLPIP03973 132 aa13.22□□□□□ -0.29
SCARF1-206ENST00000573852 GYPEP15421 78 aa13.22□□□□□ -0.29
SCARF1-206ENST00000573852 CXCL5P42830 114 aa13.22□□□□□ -0.29
SCARF1-206ENST00000573852 RNASE1P07998 156 aaKnown RBP13.21□□□□□ -0.29
SCARF1-206ENST00000573852 OBSCN-AS1Q96MR7 158 aa13.21□□□□□ -0.29
SCARF1-206ENST00000573852 CLPSL2Q6UWE3 100 aa13.21□□□□□ -0.3
SCARF1-206ENST00000573852 KRTAP1-1Q07627 177 aa13.2□□□□□ -0.3
SCARF1-206ENST00000573852 GCN1Q92616 2671 aaKnown RBP13.2□□□□□ -0.3
SCARF1-206ENST00000573852 LY6G6DO95868 133 aa13.19□□□□□ -0.3
SCARF1-206ENST00000573852 KIR2DL5BQ8NHK3 375 aa13.19□□□□□ -0.3
SCARF1-206ENST00000573852 NBEAL2Q6ZNJ1 2754 aa13.19□□□□□ -0.3
SCARF1-206ENST00000573852 NCR3O14931 201 aa13.19□□□□□ -0.3
SCARF1-206ENST00000573852 SS18Q15532 418 aa13.18□□□□□ -0.3
SCARF1-206ENST00000573852 KLK5Q9Y337 293 aaPredicted RBP13.18□□□□□ -0.3
SCARF1-206ENST00000573852 A0A096LPF7 62 aa13.18□□□□□ -0.3
SCARF1-206ENST00000573852 LINC00612Q8N6U2 182 aa13.18□□□□□ -0.3
SCARF1-206ENST00000573852 A0A1B0GUV1 79 aa13.17□□□□□ -0.3
SCARF1-206ENST00000573852 Q8IZM0 81 aa13.17□□□□□ -0.3
SCARF1-206ENST00000573852 C3orf22Q8N5N4 141 aa13.16□□□□□ -0.3
SCARF1-206ENST00000573852 PRR3P79522 188 aaKnown RBP13.16□□□□□ -0.3
SCARF1-206ENST00000573852 LINC00846Q9NV44 126 aa13.16□□□□□ -0.3
SCARF1-206ENST00000573852 PDZD2O15018 2839 aa13.14□□□□□ -0.31
SCARF1-206ENST00000573852 TMEM126AQ9H061 195 aa13.14□□□□□ -0.31
SCARF1-206ENST00000573852 NANOS2P60321 138 aaKnown RBP13.14□□□□□ -0.31
SCARF1-206ENST00000573852 C9orf153Q5TBE3 101 aa13.14□□□□□ -0.31
SCARF1-206ENST00000573852 X6R8D5 127 aa13.13□□□□□ -0.31
SCARF1-206ENST00000573852 IGKV3D-7A0A0C4DH55 119 aa13.13□□□□□ -0.31
SCARF1-206ENST00000573852 UQCRQO14949 82 aa13.13□□□□□ -0.31
SCARF1-206ENST00000573852 HIST1H4AP62805 103 aaKnown RBP13.13□□□□□ -0.31
SCARF1-206ENST00000573852 ORMDL1Q9P0S3 153 aa13.13□□□□□ -0.31
SCARF1-206ENST00000573852 PRO0255Q9UI72 69 aa13.12□□□□□ -0.31
SCARF1-206ENST00000573852 TENM4Q6N022 2769 aa13.11□□□□□ -0.31
SCARF1-206ENST00000573852 KIAA0087Q14695 138 aa13.11□□□□□ -0.31
SCARF1-206ENST00000573852 LINC00526Q96FQ7 95 aa13.11□□□□□ -0.31
SCARF1-206ENST00000573852 LINC01561Q8N1V8 128 aa13.1□□□□□ -0.31
SCARF1-206ENST00000573852 LINC00269Q8N2A0 174 aa13.1□□□□□ -0.31
SCARF1-206ENST00000573852 Q8N3U1 123 aa13.1□□□□□ -0.31
SCARF1-206ENST00000573852 C2orf48Q96LS8 159 aa13.1□□□□□ -0.31
SCARF1-206ENST00000573852 LOC107984640A0A0U1RRK4 108 aa13.09□□□□□ -0.31
SCARF1-206ENST00000573852 Q6JHZ5 121 aa13.09□□□□□ -0.31
SCARF1-206ENST00000573852 KRTAP10-3P60369 221 aa13.09□□□□□ -0.31
SCARF1-206ENST00000573852 LINC00167Q96N53 147 aa13.08□□□□□ -0.31
SCARF1-206ENST00000573852 COX7CP15954 63 aa13.08□□□□□ -0.32
SCARF1-206ENST00000573852 IGLV10-54A0A075B6I4 117 aa13.07□□□□□ -0.32
SCARF1-206ENST00000573852 C9orf116Q5BN46 136 aaPredicted RBP13.07□□□□□ -0.32
SCARF1-206ENST00000573852 CD164L2Q6UWJ8 174 aa13.07□□□□□ -0.32
SCARF1-206ENST00000573852 Q8N814 137 aa13.07□□□□□ -0.32
SCARF1-206ENST00000573852 CHCHD10Q8WYQ3 142 aaPredicted RBP13.06□□□□□ -0.32
SCARF1-206ENST00000573852 ITPR2Q14571 2701 aa13.06□□□□□ -0.32
SCARF1-206ENST00000573852 ATOX1O00244 68 aa13.06□□□□□ -0.32
SCARF1-206ENST00000573852 HILS1P60008 231 aa13.06□□□□□ -0.32
SCARF1-206ENST00000573852 A0A087WVE0 104 aa13.05□□□□□ -0.32
SCARF1-206ENST00000573852 CCKP06307 115 aa13.05□□□□□ -0.32
SCARF1-206ENST00000573852 Q8NDZ9 215 aa13.05□□□□□ -0.32
SCARF1-206ENST00000573852 VWFP04275 2813 aa13.05□□□□□ -0.32
SCARF1-206ENST00000573852 DEFB4AO15263 64 aa13.05□□□□□ -0.32
SCARF1-206ENST00000573852 NDUFC2O95298 119 aa13.05□□□□□ -0.32
SCARF1-206ENST00000573852 LINC00482Q8N8I6 264 aa13.04□□□□□ -0.32
SCARF1-206ENST00000573852 RPL18AQ02543 176 aaKnown RBP13.04□□□□□ -0.32
SCARF1-206ENST00000573852 COX17Q14061 63 aa13.04□□□□□ -0.32
SCARF1-206ENST00000573852 SMIM9A6NGZ8 99 aa13.03□□□□□ -0.32
SCARF1-206ENST00000573852 ANGP03950 147 aaKnown RBP13.03□□□□□ -0.32
SCARF1-206ENST00000573852 A0A1B0GX51 115 aa13.03□□□□□ -0.32
SCARF1-206ENST00000573852 REG3AQ06141 175 aa13.02□□□□□ -0.32
SCARF1-206ENST00000573852 IGHV4-28A0A0C4DH34 117 aa13.02□□□□□ -0.33
SCARF1-206ENST00000573852 SPATA3Q8NHX4 192 aa13.01□□□□□ -0.33
SCARF1-206ENST00000573852 LYRM9A8MSI8 78 aa13□□□□□ -0.33
SCARF1-206ENST00000573852 JMJD7-PLA2G4BH0Y9G9 81 aa13□□□□□ -0.33
SCARF1-206ENST00000573852 TMEM256-PLSCR3K7ERE1 68 aa12.99□□□□□ -0.33
SCARF1-206ENST00000573852 CRYGAP11844 174 aa12.99□□□□□ -0.33
SCARF1-206ENST00000573852 C6orf99Q4VX62 202 aa12.99□□□□□ -0.33
SCARF1-206ENST00000573852 DEFB135Q30KP9 77 aa12.98□□□□□ -0.33
SCARF1-206ENST00000573852 C10orf25Q5T742 122 aa12.97□□□□□ -0.33
SCARF1-206ENST00000573852 C6orf223Q8N319 242 aa12.97□□□□□ -0.33
SCARF1-206ENST00000573852 hADV29S1A0JD25 119 aa12.97□□□□□ -0.33
SCARF1-206ENST00000573852 CYSTM1Q9H1C7 97 aa12.97□□□□□ -0.33
SCARF1-206ENST00000573852 UNQ6190/PRO20217Q6UXQ8 127 aa12.96□□□□□ -0.34
SCARF1-206ENST00000573852 SMR3AQ99954 134 aa12.96□□□□□ -0.34
SCARF1-206ENST00000573852 USP17L23D6RBM5 183 aa12.95□□□□□ -0.34
SCARF1-206ENST00000573852 S100A7L2Q5SY68 101 aa12.95□□□□□ -0.34
SCARF1-206ENST00000573852 DAD1P61803 113 aa12.94□□□□□ -0.34
SCARF1-206ENST00000573852 LINC00575Q6W349 94 aa12.94□□□□□ -0.34
SCARF1-206ENST00000573852 SERP2Q8N6R1 65 aa12.93□□□□□ -0.34
SCARF1-206ENST00000573852 WFDC9Q8NEX5 89 aa12.93□□□□□ -0.34
SCARF1-206ENST00000573852 CELA1Q9UNI1 258 aa12.93□□□□□ -0.34
SCARF1-206ENST00000573852 FAM19A5Q7Z5A7 132 aaPredicted RBP12.93□□□□□ -0.34
SCARF1-206ENST00000573852 HIVEP2P31629 2446 aa12.93□□□□□ -0.34
SCARF1-206ENST00000573852 SPAG11BQ08648 103 aa12.92□□□□□ -0.34
SCARF1-206ENST00000573852 J3KT08 172 aa12.91□□□□□ -0.34
SCARF1-206ENST00000573852 UPK3BQ9BT76 320 aa12.9□□□□□ -0.34
SCARF1-206ENST00000573852 CYSRT1A8MQ03 144 aa12.89□□□□□ -0.35
SCARF1-206ENST00000573852 LYPD5Q6UWN5 251 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms