RNA–Protein interactions for RNA: ENST00000572021.5

TRIM25-205, Transcript of tripartite motif containing 25, humanhuman

TSL 1 (best)

Gene TRIM25, Length 1,555 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM25-205ENST00000572021 HIST1H4GQ99525 98 aa7.88□□□□□ -1.15
TRIM25-205ENST00000572021 C1orf43Q9BWL3 253 aa7.88□□□□□ -1.15
TRIM25-205ENST00000572021 DYNC1H1Q14204 4646 aaKnown RBP7.88□□□□□ -1.15
TRIM25-205ENST00000572021 RNASE13Q5GAN3 156 aaKnown RBP7.88□□□□□ -1.15
TRIM25-205ENST00000572021 IGHV1-58A0A0C4DH39 117 aa7.87□□□□□ -1.15
TRIM25-205ENST00000572021 C9orf118A6NHY6 69 aa7.87□□□□□ -1.15
TRIM25-205ENST00000572021 HERVK_113P63121 156 aa7.87□□□□□ -1.15
TRIM25-205ENST00000572021 MIAQ16674 131 aa7.87□□□□□ -1.15
TRIM25-205ENST00000572021 CDC42SE2Q9NRR3 84 aa7.87□□□□□ -1.15
TRIM25-205ENST00000572021 A0A1B0GWB2 263 aa7.86□□□□□ -1.15
TRIM25-205ENST00000572021 SMIM13P0DJ93 91 aa7.86□□□□□ -1.15
TRIM25-205ENST00000572021 PTTG1IPP53801 180 aa7.86□□□□□ -1.15
TRIM25-205ENST00000572021 UBE2V1Q13404 147 aa7.86□□□□□ -1.15
TRIM25-205ENST00000572021 TMEM101Q96IK0 257 aa7.86□□□□□ -1.15
TRIM25-205ENST00000572021 GEMIN7Q9H840 131 aaKnown RBP7.86□□□□□ -1.15
TRIM25-205ENST00000572021 TMEM238LA0A1B0GVL6 79 aa7.85□□□□□ -1.15
TRIM25-205ENST00000572021 A6NJY4 79 aa7.85□□□□□ -1.15
TRIM25-205ENST00000572021 KRTAP26-1Q6PEX3 210 aa7.85□□□□□ -1.15
TRIM25-205ENST00000572021 Q8N814 137 aa7.85□□□□□ -1.15
TRIM25-205ENST00000572021 IGLV2-33A0A075B6J2 118 aaPredicted RBP7.84□□□□□ -1.15
TRIM25-205ENST00000572021 VAMP3Q15836 100 aa7.84□□□□□ -1.15
TRIM25-205ENST00000572021 LINC00242Q5T6M2 205 aa7.84□□□□□ -1.15
TRIM25-205ENST00000572021 NHP2Q9NX24 153 aaKnown RBP7.84□□□□□ -1.15
TRIM25-205ENST00000572021 DNAH5Q8TE73 4624 aa7.84□□□□□ -1.15
TRIM25-205ENST00000572021 TMEM238C9JI98 176 aa7.83□□□□□ -1.16
TRIM25-205ENST00000572021 SRSF9Q13242 221 aaKnown RBP eCLIP7.83□□□□□ -1.16
TRIM25-205ENST00000572021 PGPEP1Q9NXJ5 209 aa7.83□□□□□ -1.16
TRIM25-205ENST00000572021 CDKN2A-AS1Q9UH64 79 aa7.83□□□□□ -1.16
TRIM25-205ENST00000572021 KIAA1109Q2LD37 5005 aa7.83□□□□□ -1.16
TRIM25-205ENST00000572021 IGHV3-64A0A075B6Q5 118 aa7.82□□□□□ -1.16
TRIM25-205ENST00000572021 IGLV5-39A0A0G2JS06 123 aa7.82□□□□□ -1.16
TRIM25-205ENST00000572021 USP17L23D6RBM5 183 aa7.82□□□□□ -1.16
TRIM25-205ENST00000572021 H3BUT2 72 aa7.82□□□□□ -1.16
TRIM25-205ENST00000572021 IGLV5-52A0A0A0MRZ9 124 aa7.81□□□□□ -1.16
TRIM25-205ENST00000572021 TRAV8-4A0A0B4J246 113 aa7.81□□□□□ -1.16
TRIM25-205ENST00000572021 A0A0J9YXY3 114 aa7.81□□□□□ -1.16
TRIM25-205ENST00000572021 GAGE12HA6NDE8 117 aa7.81□□□□□ -1.16
TRIM25-205ENST00000572021 CCL25O15444 150 aa7.81□□□□□ -1.16
TRIM25-205ENST00000572021 SPINK8P0C7L1 97 aa7.81□□□□□ -1.16
TRIM25-205ENST00000572021 CHCHD10Q8WYQ3 142 aaPredicted RBP7.81□□□□□ -1.16
TRIM25-205ENST00000572021 RAB37Q96AX2 223 aa7.81□□□□□ -1.16
TRIM25-205ENST00000572021 LRP1BQ9NZR2 4599 aa7.81□□□□□ -1.16
TRIM25-205ENST00000572021 LINC00959A0A1B0GUT2 108 aa7.8□□□□□ -1.16
TRIM25-205ENST00000572021 A0A1W2PPM0 123 aa7.8□□□□□ -1.16
TRIM25-205ENST00000572021 XCL1P47992 114 aa7.8□□□□□ -1.16
TRIM25-205ENST00000572021 KRTAP10-1P60331 282 aa7.8□□□□□ -1.16
TRIM25-205ENST00000572021 COX6A2Q02221 97 aa7.8□□□□□ -1.16
TRIM25-205ENST00000572021 LINC01620Q4KN68 170 aa7.8□□□□□ -1.16
TRIM25-205ENST00000572021 NDUFA12Q9UI09 145 aa7.8□□□□□ -1.16
TRIM25-205ENST00000572021 SMIM1B2RUZ4 78 aa7.8□□□□□ -1.16
TRIM25-205ENST00000572021 K7ERJ3 54 aa7.8□□□□□ -1.16
TRIM25-205ENST00000572021 NDUFA1O15239 70 aa7.8□□□□□ -1.16
TRIM25-205ENST00000572021 TIMM17BO60830 172 aa7.8□□□□□ -1.16
TRIM25-205ENST00000572021 GTF2H5Q6ZYL4 71 aa7.8□□□□□ -1.16
TRIM25-205ENST00000572021 SPANXDQ9BXN6 97 aa7.8□□□□□ -1.16
TRIM25-205ENST00000572021 SPANXCQ9NY87 97 aa7.8□□□□□ -1.16
TRIM25-205ENST00000572021 TRAV13-1A0A0B4J241 112 aa7.79□□□□□ -1.16
TRIM25-205ENST00000572021 K7EP34 96 aa7.79□□□□□ -1.16
TRIM25-205ENST00000572021 LITAFQ99732 161 aa7.79□□□□□ -1.16
TRIM25-205ENST00000572021 FABP2P12104 132 aa7.78□□□□□ -1.16
TRIM25-205ENST00000572021 NTN5Q8WTR8 489 aaPredicted RBP7.78□□□□□ -1.16
TRIM25-205ENST00000572021 GAGE10A6NGK3 116 aa7.77□□□□□ -1.17
TRIM25-205ENST00000572021 FOXI1Q12951 378 aa7.77□□□□□ -1.17
TRIM25-205ENST00000572021 SS18Q15532 418 aa7.77□□□□□ -1.17
TRIM25-205ENST00000572021 HAMPP81172 84 aa7.76□□□□□ -1.17
TRIM25-205ENST00000572021 RPL24P83731 157 aaKnown RBP7.76□□□□□ -1.17
TRIM25-205ENST00000572021 HIGD2BQ4VC39 106 aa7.76□□□□□ -1.17
TRIM25-205ENST00000572021 C14orf177Q52M58 125 aa7.76□□□□□ -1.17
TRIM25-205ENST00000572021 C15orf56Q8N910 161 aa7.76□□□□□ -1.17
TRIM25-205ENST00000572021 NAA38Q9BRA0 125 aaKnown RBP7.76□□□□□ -1.17
TRIM25-205ENST00000572021 SPCS1Q9Y6A9 102 aa7.76□□□□□ -1.17
TRIM25-205ENST00000572021 APOBP04114 4563 aaKnown RBP7.75□□□□□ -1.17
TRIM25-205ENST00000572021 TRAV16A0A0A6YYK6 109 aaPredicted RBP7.75□□□□□ -1.17
TRIM25-205ENST00000572021 A0A0B4J2C4 111 aa7.75□□□□□ -1.17
TRIM25-205ENST00000572021 HERV-K104P63124 156 aa7.75□□□□□ -1.17
TRIM25-205ENST00000572021 RYR1P21817 5038 aa7.75□□□□□ -1.17
TRIM25-205ENST00000572021 IGHV3OR16-9A0A0B4J2B5 98 aa7.74□□□□□ -1.17
TRIM25-205ENST00000572021 CFC1BP0CG36 223 aa7.74□□□□□ -1.17
TRIM25-205ENST00000572021 CFC1P0CG37 223 aa7.74□□□□□ -1.17
TRIM25-205ENST00000572021 IFITM1P13164 125 aa7.74□□□□□ -1.17
TRIM25-205ENST00000572021 CD164L2Q6UWJ8 174 aa7.74□□□□□ -1.17
TRIM25-205ENST00000572021 MUSTN1Q8IVN3 82 aa7.74□□□□□ -1.17
TRIM25-205ENST00000572021 LINC00526Q96FQ7 95 aa7.74□□□□□ -1.17
TRIM25-205ENST00000572021 ZNF625Q96I27 306 aaPredicted RBP7.74□□□□□ -1.17
TRIM25-205ENST00000572021 HSPG2P98160 4391 aa7.74□□□□□ -1.17
TRIM25-205ENST00000572021 A0A087WZ39 114 aa7.73□□□□□ -1.17
TRIM25-205ENST00000572021 A4D1N5 150 aa7.73□□□□□ -1.17
TRIM25-205ENST00000572021 APOMO95445 188 aa7.73□□□□□ -1.17
TRIM25-205ENST00000572021 CIRBPQ14011 172 aaKnown RBP7.73□□□□□ -1.17
TRIM25-205ENST00000572021 C5orf38Q86SI9 138 aa7.73□□□□□ -1.17
TRIM25-205ENST00000572021 LINC01561Q8N1V8 128 aa7.73□□□□□ -1.17
TRIM25-205ENST00000572021 KRTAP17-1Q9BYP8 105 aa7.73□□□□□ -1.17
TRIM25-205ENST00000572021 PPDPFQ9H3Y8 114 aa7.73□□□□□ -1.17
TRIM25-205ENST00000572021 FAM30AQ9NZY2 134 aa7.73□□□□□ -1.17
TRIM25-205ENST00000572021 HERC2O95714 4834 aa7.73□□□□□ -1.17
TRIM25-205ENST00000572021 TSPAN13O95857 204 aa7.72□□□□□ -1.17
TRIM25-205ENST00000572021 SLPIP03973 132 aa7.72□□□□□ -1.17
TRIM25-205ENST00000572021 LYRM7Q5U5X0 104 aa7.72□□□□□ -1.17
TRIM25-205ENST00000572021 CDK2AP2O75956 126 aa7.71□□□□□ -1.17
TRIM25-205ENST00000572021 ADAMTSL4-AS1Q5T5F5 129 aa7.71□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms