RNA–Protein interactions for RNA: ENST00000571995.5

RAB40B-206, Transcript of RAB40B, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB40B, Length 3,859 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40B-206ENST00000571995 C15orf53Q8NAA6 179 aa11.43□□□□□ -0.58
RAB40B-206ENST00000571995 A0A0B4J2C4 111 aa11.43□□□□□ -0.58
RAB40B-206ENST00000571995 ZNF561-AS1K7EIQ3 104 aa11.43□□□□□ -0.58
RAB40B-206ENST00000571995 REG3AQ06141 175 aa11.43□□□□□ -0.58
RAB40B-206ENST00000571995 NDUFA1O15239 70 aa11.42□□□□□ -0.58
RAB40B-206ENST00000571995 CHCHD10Q8WYQ3 142 aaPredicted RBP11.42□□□□□ -0.58
RAB40B-206ENST00000571995 XGP55808 180 aa11.42□□□□□ -0.58
RAB40B-206ENST00000571995 MRPL23Q16540 153 aaKnown RBP11.41□□□□□ -0.58
RAB40B-206ENST00000571995 TIRAPP58753 221 aa11.41□□□□□ -0.58
RAB40B-206ENST00000571995 LINC00959A0A1B0GUT2 108 aa11.4□□□□□ -0.58
RAB40B-206ENST00000571995 LAMTOR3Q9UHA4 124 aa11.4□□□□□ -0.58
RAB40B-206ENST00000571995 SOSTDC1Q6X4U4 206 aa11.39□□□□□ -0.59
RAB40B-206ENST00000571995 PRO0461Q9UI25 63 aa11.39□□□□□ -0.59
RAB40B-206ENST00000571995 IFITM1P13164 125 aa11.39□□□□□ -0.59
RAB40B-206ENST00000571995 TRBV10-2A0A0K0K1G8 114 aa11.38□□□□□ -0.59
RAB40B-206ENST00000571995 SPAG11BQ08648 103 aa11.38□□□□□ -0.59
RAB40B-206ENST00000571995 C6orf223Q8N319 242 aa11.38□□□□□ -0.59
RAB40B-206ENST00000571995 STAB2Q8WWQ8 2551 aa11.38□□□□□ -0.59
RAB40B-206ENST00000571995 CRYBA4P53673 196 aa11.37□□□□□ -0.59
RAB40B-206ENST00000571995 RPL18AQ02543 176 aaKnown RBP11.37□□□□□ -0.59
RAB40B-206ENST00000571995 A8MTW9 85 aa11.36□□□□□ -0.59
RAB40B-206ENST00000571995 H7C423 109 aa11.36□□□□□ -0.59
RAB40B-206ENST00000571995 NANOS2P60321 138 aaKnown RBP11.36□□□□□ -0.59
RAB40B-206ENST00000571995 FAM104AQ969W3 186 aa11.36□□□□□ -0.59
RAB40B-206ENST00000571995 HIST1H4AP62805 103 aaKnown RBP11.35□□□□□ -0.59
RAB40B-206ENST00000571995 TRAV13-2A0A0B4J235 113 aa11.35□□□□□ -0.59
RAB40B-206ENST00000571995 SCGB1A1P11684 91 aa11.35□□□□□ -0.59
RAB40B-206ENST00000571995 HERV-K104P63124 156 aa11.35□□□□□ -0.59
RAB40B-206ENST00000571995 C16orf95Q9H693 158 aa11.35□□□□□ -0.59
RAB40B-206ENST00000571995 CCL18P55774 89 aa11.35□□□□□ -0.59
RAB40B-206ENST00000571995 PKD1L1Q8TDX9 2849 aa11.34□□□□□ -0.59
RAB40B-206ENST00000571995 CAMK2N2Q96S95 79 aa11.34□□□□□ -0.59
RAB40B-206ENST00000571995 C14orf132Q9NPU4 83 aa11.34□□□□□ -0.59
RAB40B-206ENST00000571995 LITAFQ99732 161 aa11.34□□□□□ -0.59
RAB40B-206ENST00000571995 UNQ6190/PRO20217Q6UXQ8 127 aa11.33□□□□□ -0.6
RAB40B-206ENST00000571995 Q6ZTC4 211 aa11.33□□□□□ -0.6
RAB40B-206ENST00000571995 SPANXDQ9BXN6 97 aa11.33□□□□□ -0.6
RAB40B-206ENST00000571995 C19orf73Q9NVV2 129 aa11.33□□□□□ -0.6
RAB40B-206ENST00000571995 SPANXCQ9NY87 97 aa11.33□□□□□ -0.6
RAB40B-206ENST00000571995 TRBV30A0A0K0K1B3 111 aa11.33□□□□□ -0.6
RAB40B-206ENST00000571995 PLAC8L1A1L4L8 177 aa11.32□□□□□ -0.6
RAB40B-206ENST00000571995 DEFB105AQ8NG35 78 aa11.32□□□□□ -0.6
RAB40B-206ENST00000571995 IGKV3D-7A0A0C4DH55 119 aa11.32□□□□□ -0.6
RAB40B-206ENST00000571995 X6R8D5 127 aa11.31□□□□□ -0.6
RAB40B-206ENST00000571995 TENM3Q9P273 2699 aa11.31□□□□□ -0.6
RAB40B-206ENST00000571995 A0A0J9YWU9 116 aa11.3□□□□□ -0.6
RAB40B-206ENST00000571995 KPRPQ5T749 579 aaPredicted RBP11.3□□□□□ -0.6
RAB40B-206ENST00000571995 SMIM11BQ8TCY0 68 aa11.3□□□□□ -0.6
RAB40B-206ENST00000571995 LINC00337Q8N6G1 96 aa11.3□□□□□ -0.6
RAB40B-206ENST00000571995 C1orf43Q9BWL3 253 aa11.3□□□□□ -0.6
RAB40B-206ENST00000571995 DEFB131BA0A096LNP1 70 aa11.29□□□□□ -0.6
RAB40B-206ENST00000571995 LST1O00453 97 aa11.28□□□□□ -0.6
RAB40B-206ENST00000571995 CSNK1G2-AS1Q8NCQ2 148 aa11.28□□□□□ -0.6
RAB40B-206ENST00000571995 C11orf45Q8TAV5 145 aa11.28□□□□□ -0.6
RAB40B-206ENST00000571995 LYRM9A8MSI8 78 aa11.28□□□□□ -0.6
RAB40B-206ENST00000571995 UBE2DNLQ8IWF7 75 aa11.28□□□□□ -0.6
RAB40B-206ENST00000571995 WFDC10BQ8IUB3 73 aa11.27□□□□□ -0.6
RAB40B-206ENST00000571995 CDIP1Q9H305 208 aa11.27□□□□□ -0.6
RAB40B-206ENST00000571995 B5MCH6 92 aa11.27□□□□□ -0.61
RAB40B-206ENST00000571995 RNF183Q96D59 192 aa11.27□□□□□ -0.61
RAB40B-206ENST00000571995 TRRAPQ9Y4A5 3859 aa11.26□□□□□ -0.61
RAB40B-206ENST00000571995 A0A087WYN8 130 aa11.26□□□□□ -0.61
RAB40B-206ENST00000571995 PSCAO43653 123 aa11.26□□□□□ -0.61
RAB40B-206ENST00000571995 IGHV3OR16-9A0A0B4J2B5 98 aa11.26□□□□□ -0.61
RAB40B-206ENST00000571995 C6orf99Q4VX62 202 aa11.26□□□□□ -0.61
RAB40B-206ENST00000571995 FAM218AQ96MZ4 157 aa11.26□□□□□ -0.61
RAB40B-206ENST00000571995 IGLV5-39A0A0G2JS06 123 aa11.25□□□□□ -0.61
RAB40B-206ENST00000571995 OVOL2Q9BRP0 275 aa11.25□□□□□ -0.61
RAB40B-206ENST00000571995 SMIM9A6NGZ8 99 aa11.24□□□□□ -0.61
RAB40B-206ENST00000571995 CYSRT1A8MQ03 144 aa11.24□□□□□ -0.61
RAB40B-206ENST00000571995 MIFP14174 115 aa11.24□□□□□ -0.61
RAB40B-206ENST00000571995 A0A087WZ39 114 aa11.23□□□□□ -0.61
RAB40B-206ENST00000571995 SPATA25Q9BR10 227 aa11.23□□□□□ -0.61
RAB40B-206ENST00000571995 H3BT86 120 aa11.22□□□□□ -0.61
RAB40B-206ENST00000571995 HAMPP81172 84 aa11.22□□□□□ -0.61
RAB40B-206ENST00000571995 C10orf25Q5T742 122 aa11.21□□□□□ -0.61
RAB40B-206ENST00000571995 KIR2DL5BQ8NHK3 375 aa11.21□□□□□ -0.61
RAB40B-206ENST00000571995 CSDC2Q9Y534 153 aaKnown RBP11.21□□□□□ -0.61
RAB40B-206ENST00000571995 KRTAP24-1Q3LI83 254 aa11.21□□□□□ -0.61
RAB40B-206ENST00000571995 CD164L2Q6UWJ8 174 aa11.21□□□□□ -0.62
RAB40B-206ENST00000571995 IGKV2-24A0A0C4DH68 120 aa11.2□□□□□ -0.62
RAB40B-206ENST00000571995 IBA57-AS1B1ANH7 110 aa11.2□□□□□ -0.62
RAB40B-206ENST00000571995 IGKV2-28A0A075B6P5 120 aa11.2□□□□□ -0.62
RAB40B-206ENST00000571995 TIMM17BO60830 172 aa11.2□□□□□ -0.62
RAB40B-206ENST00000571995 IGKV2D-28P01615 120 aa11.2□□□□□ -0.62
RAB40B-206ENST00000571995 SBSPONQ8IVN8 264 aa11.2□□□□□ -0.62
RAB40B-206ENST00000571995 SS18L2Q9UHA2 77 aa11.2□□□□□ -0.62
RAB40B-206ENST00000571995 FAM236AA0A1B0GUQ0 79 aa11.19□□□□□ -0.62
RAB40B-206ENST00000571995 FAM236BA0A1B0GV22 79 aa11.19□□□□□ -0.62
RAB40B-206ENST00000571995 IGLV5-45A0A087WSX0 123 aa11.18□□□□□ -0.62
RAB40B-206ENST00000571995 ORMDL1Q9P0S3 153 aa11.18□□□□□ -0.62
RAB40B-206ENST00000571995 SDIM1Q6ZPB5 146 aa11.18□□□□□ -0.62
RAB40B-206ENST00000571995 NKAPP1Q8N9T2 125 aa11.18□□□□□ -0.62
RAB40B-206ENST00000571995 IGLV2-33A0A075B6J2 118 aaPredicted RBP11.17□□□□□ -0.62
RAB40B-206ENST00000571995 IL17DQ8TAD2 202 aa11.16□□□□□ -0.62
RAB40B-206ENST00000571995 TENM2Q9NT68 2774 aa11.15□□□□□ -0.62
RAB40B-206ENST00000571995 INAFM2P0DMQ5 153 aa11.15□□□□□ -0.62
RAB40B-206ENST00000571995 WFDC9Q8NEX5 89 aa11.15□□□□□ -0.62
RAB40B-206ENST00000571995 TMEM126AQ9H061 195 aa11.15□□□□□ -0.62
RAB40B-206ENST00000571995 LELP1Q5T871 98 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 85 ms