RNA–Protein interactions for RNA: ENST00000568917.1

CNOT1-214, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 5

Gene CNOT1, Length 1,317 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-214ENST00000568917 IFITM1P13164 125 aa6.36□□□□□ -1.39
CNOT1-214ENST00000568917 CXCL5P42830 114 aa6.36□□□□□ -1.39
CNOT1-214ENST00000568917 XCL1P47992 114 aa6.36□□□□□ -1.39
CNOT1-214ENST00000568917 FXYD2P54710 66 aa6.36□□□□□ -1.39
CNOT1-214ENST00000568917 CCL18P55774 89 aa6.36□□□□□ -1.39
CNOT1-214ENST00000568917 RPL24P83731 157 aaKnown RBP6.36□□□□□ -1.39
CNOT1-214ENST00000568917 UPK3BQ9BT76 320 aa6.36□□□□□ -1.39
CNOT1-214ENST00000568917 KRTAP4-9Q9BYQ8 210 aa6.36□□□□□ -1.39
CNOT1-214ENST00000568917 HUWE1Q7Z6Z7 4374 aaKnown RBP6.36□□□□□ -1.39
CNOT1-214ENST00000568917 TENM3Q9P273 2699 aa6.36□□□□□ -1.39
CNOT1-214ENST00000568917 TAX1BP3O14907 124 aa6.35□□□□□ -1.39
CNOT1-214ENST00000568917 APOMO95445 188 aa6.35□□□□□ -1.39
CNOT1-214ENST00000568917 SMIM13P0DJ93 91 aa6.35□□□□□ -1.39
CNOT1-214ENST00000568917 WFDC10BQ8IUB3 73 aa6.35□□□□□ -1.39
CNOT1-214ENST00000568917 LITAFQ99732 161 aa6.35□□□□□ -1.39
CNOT1-214ENST00000568917 Q9H8V8 135 aa6.35□□□□□ -1.39
CNOT1-214ENST00000568917 KLK12Q9UKR0 248 aa6.35□□□□□ -1.39
CNOT1-214ENST00000568917 COX11Q9Y6N1 276 aa6.35□□□□□ -1.39
CNOT1-214ENST00000568917 A0A1B0GV90 55 aa6.34□□□□□ -1.39
CNOT1-214ENST00000568917 PRSS2P07478 247 aa6.34□□□□□ -1.39
CNOT1-214ENST00000568917 FOXI1Q12951 378 aa6.34□□□□□ -1.39
CNOT1-214ENST00000568917 ENHOQ6UWT2 76 aa6.34□□□□□ -1.39
CNOT1-214ENST00000568917 C5orf38Q86SI9 138 aa6.34□□□□□ -1.39
CNOT1-214ENST00000568917 KLK5Q9Y337 293 aaPredicted RBP6.34□□□□□ -1.39
CNOT1-214ENST00000568917 TRAV16A0A0A6YYK6 109 aaPredicted RBP6.33□□□□□ -1.4
CNOT1-214ENST00000568917 C9orf118A6NHY6 69 aa6.33□□□□□ -1.4
CNOT1-214ENST00000568917 IBA57-AS1B1ANH7 110 aa6.33□□□□□ -1.4
CNOT1-214ENST00000568917 IGLL5B9A064 214 aa6.33□□□□□ -1.4
CNOT1-214ENST00000568917 IGHV3-33P01772 117 aa6.33□□□□□ -1.4
CNOT1-214ENST00000568917 CLPSL2Q6UWE3 100 aa6.33□□□□□ -1.4
CNOT1-214ENST00000568917 MUC7Q8TAX7 377 aa6.33□□□□□ -1.4
CNOT1-214ENST00000568917 NHP2Q9NX24 153 aaKnown RBP6.33□□□□□ -1.4
CNOT1-214ENST00000568917 NUPR2A6NF83 97 aa6.32□□□□□ -1.4
CNOT1-214ENST00000568917 MALP21145 153 aa6.32□□□□□ -1.4
CNOT1-214ENST00000568917 C6orf226Q5I0X4 101 aa6.32□□□□□ -1.4
CNOT1-214ENST00000568917 LINC00588Q9Y4M8 146 aa6.32□□□□□ -1.4
CNOT1-214ENST00000568917 A0A0B4J2C4 111 aa6.31□□□□□ -1.4
CNOT1-214ENST00000568917 COX17Q14061 63 aa6.31□□□□□ -1.4
CNOT1-214ENST00000568917 MEIG1Q5JSS6 88 aa6.31□□□□□ -1.4
CNOT1-214ENST00000568917 MUSTN1Q8IVN3 82 aa6.31□□□□□ -1.4
CNOT1-214ENST00000568917 UBE2WQ96B02 151 aa6.31□□□□□ -1.4
CNOT1-214ENST00000568917 TOMM7Q9P0U1 55 aa6.31□□□□□ -1.4
CNOT1-214ENST00000568917 DNAH9Q9NYC9 4486 aa6.31□□□□□ -1.4
CNOT1-214ENST00000568917 IGLV10-54A0A075B6I4 117 aa6.3□□□□□ -1.4
CNOT1-214ENST00000568917 GAGE12HA6NDE8 117 aa6.3□□□□□ -1.4
CNOT1-214ENST00000568917 F8WDY8 70 aa6.3□□□□□ -1.4
CNOT1-214ENST00000568917 KRTAP10-2P60368 255 aa6.3□□□□□ -1.4
CNOT1-214ENST00000568917 CKS1BP61024 79 aa6.3□□□□□ -1.4
CNOT1-214ENST00000568917 KIAA0087Q14695 138 aa6.3□□□□□ -1.4
CNOT1-214ENST00000568917 KRTAP9-3Q9BYQ3 159 aa6.3□□□□□ -1.4
CNOT1-214ENST00000568917 A4D1N5 150 aa6.29□□□□□ -1.4
CNOT1-214ENST00000568917 ADAMTSL4-AS1Q5T5F5 129 aa6.29□□□□□ -1.4
CNOT1-214ENST00000568917 KRTAP26-1Q6PEX3 210 aa6.29□□□□□ -1.4
CNOT1-214ENST00000568917 RMI2Q96E14 147 aa6.29□□□□□ -1.4
CNOT1-214ENST00000568917 C1orf43Q9BWL3 253 aa6.29□□□□□ -1.4
CNOT1-214ENST00000568917 APLNQ9ULZ1 77 aa6.29□□□□□ -1.4
CNOT1-214ENST00000568917 CFC1BP0CG36 223 aa6.28□□□□□ -1.4
CNOT1-214ENST00000568917 CFC1P0CG37 223 aa6.28□□□□□ -1.4
CNOT1-214ENST00000568917 LINC00308Q8TCZ7 52 aa6.28□□□□□ -1.4
CNOT1-214ENST00000568917 PRO1854Q9UHT4 67 aa6.28□□□□□ -1.4
CNOT1-214ENST00000568917 GVQW2A0A096LPI5 108 aaPredicted RBP6.27□□□□□ -1.41
CNOT1-214ENST00000568917 LOC107984156A0A0G2JMH3 177 aa6.27□□□□□ -1.41
CNOT1-214ENST00000568917 SPAG11BQ08648 103 aa6.27□□□□□ -1.41
CNOT1-214ENST00000568917 LYRM7Q5U5X0 104 aa6.27□□□□□ -1.41
CNOT1-214ENST00000568917 ARL17AQ8IVW1 177 aa6.27□□□□□ -1.41
CNOT1-214ENST00000568917 RAB37Q96AX2 223 aa6.27□□□□□ -1.41
CNOT1-214ENST00000568917 ERG28Q9UKR5 140 aa6.27□□□□□ -1.41
CNOT1-214ENST00000568917 A0A1W2PPM0 123 aa6.26□□□□□ -1.41
CNOT1-214ENST00000568917 H3BUT2 72 aa6.26□□□□□ -1.41
CNOT1-214ENST00000568917 VAMP3Q15836 100 aa6.26□□□□□ -1.41
CNOT1-214ENST00000568917 TRBV30A0A0K0K1B3 111 aa6.25□□□□□ -1.41
CNOT1-214ENST00000568917 K7ERJ3 54 aa6.25□□□□□ -1.41
CNOT1-214ENST00000568917 FABP2P12104 132 aa6.25□□□□□ -1.41
CNOT1-214ENST00000568917 LINC00158P58513 81 aa6.25□□□□□ -1.41
CNOT1-214ENST00000568917 UBE2V1Q13404 147 aa6.25□□□□□ -1.41
CNOT1-214ENST00000568917 GTF2H5Q6ZYL4 71 aa6.25□□□□□ -1.41
CNOT1-214ENST00000568917 NTN5Q8WTR8 489 aaPredicted RBP6.25□□□□□ -1.41
CNOT1-214ENST00000568917 C2orf48Q96LS8 159 aa6.25□□□□□ -1.41
CNOT1-214ENST00000568917 MIR7-3HGQ8N6C7 128 aa6.25□□□□□ -1.41
CNOT1-214ENST00000568917 COL7A1Q02388 2944 aa6.24□□□□□ -1.41
CNOT1-214ENST00000568917 IGKV2D-24A0A075B6R9 120 aa6.24□□□□□ -1.41
CNOT1-214ENST00000568917 TSPAN13O95857 204 aa6.24□□□□□ -1.41
CNOT1-214ENST00000568917 LCE5AQ5TCM9 118 aa6.24□□□□□ -1.41
CNOT1-214ENST00000568917 C2orf82Q6UX34 121 aa6.24□□□□□ -1.41
CNOT1-214ENST00000568917 UBE2DNLQ8IWF7 75 aa6.24□□□□□ -1.41
CNOT1-214ENST00000568917 DAND5Q8N907 189 aa6.24□□□□□ -1.41
CNOT1-214ENST00000568917 DNHD1Q96M86 4753 aa6.23□□□□□ -1.41
CNOT1-214ENST00000568917 TRAV13-2A0A0B4J235 113 aa6.23□□□□□ -1.41
CNOT1-214ENST00000568917 GAGE10A6NGK3 116 aa6.23□□□□□ -1.41
CNOT1-214ENST00000568917 K7EP34 96 aa6.23□□□□□ -1.41
CNOT1-214ENST00000568917 NDUFC2O95298 119 aa6.23□□□□□ -1.41
CNOT1-214ENST00000568917 PFN2P35080 140 aa6.23□□□□□ -1.41
CNOT1-214ENST00000568917 TTC32Q5I0X7 151 aa6.23□□□□□ -1.41
CNOT1-214ENST00000568917 SOSTDC1Q6X4U4 206 aa6.23□□□□□ -1.41
CNOT1-214ENST00000568917 C15orf56Q8N910 161 aa6.23□□□□□ -1.41
CNOT1-214ENST00000568917 SPCS1Q9Y6A9 102 aa6.23□□□□□ -1.41
CNOT1-214ENST00000568917 STAB2Q8WWQ8 2551 aa6.22□□□□□ -1.41
CNOT1-214ENST00000568917 TRBV20-1A0A075B6N2 111 aa6.22□□□□□ -1.41
CNOT1-214ENST00000568917 A0A0U1RRA0 63 aa6.22□□□□□ -1.41
CNOT1-214ENST00000568917 RNF151Q2KHN1 245 aa6.22□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms