RNA–Protein interactions for RNA: ENST00000568691.5

VPS9D1-207, Transcript of VPS9 domain containing 1, humanhuman

TSL 3

Gene VPS9D1, Length 838 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-207ENST00000568691 TMEM262E9PQX1 116 aa7.86□□□□□ -1.15
VPS9D1-207ENST00000568691 TRAV13-1A0A0B4J241 112 aa7.85□□□□□ -1.15
VPS9D1-207ENST00000568691 IGHV1-58A0A0C4DH39 117 aa7.85□□□□□ -1.15
VPS9D1-207ENST00000568691 SS18Q15532 418 aa7.85□□□□□ -1.15
VPS9D1-207ENST00000568691 C2orf91Q6ZV80 131 aa7.85□□□□□ -1.15
VPS9D1-207ENST00000568691 PCP2Q8IVA1 136 aa7.85□□□□□ -1.15
VPS9D1-207ENST00000568691 LINC01561Q8N1V8 128 aa7.85□□□□□ -1.15
VPS9D1-207ENST00000568691 IGLV5-39A0A0G2JS06 123 aa7.84□□□□□ -1.15
VPS9D1-207ENST00000568691 MYMXA0A1B0GTQ4 84 aa7.84□□□□□ -1.15
VPS9D1-207ENST00000568691 LINC00959A0A1B0GUT2 108 aa7.84□□□□□ -1.15
VPS9D1-207ENST00000568691 J3QQQ9 107 aa7.84□□□□□ -1.15
VPS9D1-207ENST00000568691 LBHQ53QV2 105 aaPredicted RBP7.84□□□□□ -1.15
VPS9D1-207ENST00000568691 LINC01556Q5JQF7 62 aa7.84□□□□□ -1.15
VPS9D1-207ENST00000568691 NTN5Q8WTR8 489 aaPredicted RBP7.84□□□□□ -1.15
VPS9D1-207ENST00000568691 PRR34Q9NV39 138 aa7.84□□□□□ -1.15
VPS9D1-207ENST00000568691 CDKN2A-AS1Q9UH64 79 aa7.84□□□□□ -1.15
VPS9D1-207ENST00000568691 IGHV3OR16-9A0A0B4J2B5 98 aa7.83□□□□□ -1.16
VPS9D1-207ENST00000568691 ZNF815PA8K554 130 aa7.83□□□□□ -1.16
VPS9D1-207ENST00000568691 ANGP03950 147 aaKnown RBP7.83□□□□□ -1.16
VPS9D1-207ENST00000568691 IGHV3-30-3P0DP02 117 aa7.83□□□□□ -1.16
VPS9D1-207ENST00000568691 LGALS3P17931 250 aaKnown RBP7.83□□□□□ -1.16
VPS9D1-207ENST00000568691 A0A087WZ39 114 aa7.82□□□□□ -1.16
VPS9D1-207ENST00000568691 SMIM1B2RUZ4 78 aa7.82□□□□□ -1.16
VPS9D1-207ENST00000568691 M0R143 59 aa7.82□□□□□ -1.16
VPS9D1-207ENST00000568691 REG3AQ06141 175 aa7.82□□□□□ -1.16
VPS9D1-207ENST00000568691 HSD52Q0P140 79 aa7.82□□□□□ -1.16
VPS9D1-207ENST00000568691 SFTA2Q6UW10 78 aa7.82□□□□□ -1.16
VPS9D1-207ENST00000568691 SCXQ7RTU7 201 aa7.82□□□□□ -1.16
VPS9D1-207ENST00000568691 Q8N814 137 aa7.82□□□□□ -1.16
VPS9D1-207ENST00000568691 TRAV8-4A0A0B4J246 113 aa7.81□□□□□ -1.16
VPS9D1-207ENST00000568691 TSPEAR-AS2P59090 65 aa7.81□□□□□ -1.16
VPS9D1-207ENST00000568691 CTAG1AP78358 180 aa7.81□□□□□ -1.16
VPS9D1-207ENST00000568691 COX6A2Q02221 97 aa7.81□□□□□ -1.16
VPS9D1-207ENST00000568691 WFDC2Q14508 124 aa7.81□□□□□ -1.16
VPS9D1-207ENST00000568691 TAL2Q16559 108 aa7.81□□□□□ -1.16
VPS9D1-207ENST00000568691 WFDC10BQ8IUB3 73 aa7.81□□□□□ -1.16
VPS9D1-207ENST00000568691 LINC00269Q8N2A0 174 aa7.81□□□□□ -1.16
VPS9D1-207ENST00000568691 K7EP13 123 aa7.8□□□□□ -1.16
VPS9D1-207ENST00000568691 CRPP02741 224 aa7.8□□□□□ -1.16
VPS9D1-207ENST00000568691 SPINK8P0C7L1 97 aa7.8□□□□□ -1.16
VPS9D1-207ENST00000568691 MIAQ16674 131 aa7.8□□□□□ -1.16
VPS9D1-207ENST00000568691 CD164L2Q6UWJ8 174 aa7.8□□□□□ -1.16
VPS9D1-207ENST00000568691 TP73-AS1Q9UF72 201 aa7.8□□□□□ -1.16
VPS9D1-207ENST00000568691 FAT4Q6V0I7 4981 aa7.8□□□□□ -1.16
VPS9D1-207ENST00000568691 TRAV8-3A0A0A6YYJ7 113 aa7.79□□□□□ -1.16
VPS9D1-207ENST00000568691 KRTAP9-6A0A140TA67 174 aa7.79□□□□□ -1.16
VPS9D1-207ENST00000568691 NDUFA1O15239 70 aa7.79□□□□□ -1.16
VPS9D1-207ENST00000568691 TTTY13Q9BZ97 58 aa7.79□□□□□ -1.16
VPS9D1-207ENST00000568691 SPANXB1Q9NS25 103 aaPredicted RBP7.79□□□□□ -1.16
VPS9D1-207ENST00000568691 IGKV3OR2-268A0A0C4DH90 116 aa7.78□□□□□ -1.16
VPS9D1-207ENST00000568691 LINC01620Q4KN68 170 aa7.78□□□□□ -1.16
VPS9D1-207ENST00000568691 SCGB1D4Q6XE38 83 aa7.78□□□□□ -1.16
VPS9D1-207ENST00000568691 C10orf126Q8N4M7 172 aa7.78□□□□□ -1.16
VPS9D1-207ENST00000568691 CHCHD10Q8WYQ3 142 aaPredicted RBP7.78□□□□□ -1.16
VPS9D1-207ENST00000568691 NDUFA12Q9UI09 145 aa7.78□□□□□ -1.16
VPS9D1-207ENST00000568691 TMEM238C9JI98 176 aa7.77□□□□□ -1.17
VPS9D1-207ENST00000568691 TIMM17BO60830 172 aa7.77□□□□□ -1.17
VPS9D1-207ENST00000568691 HERV-K104P63124 156 aa7.77□□□□□ -1.17
VPS9D1-207ENST00000568691 CLPSL2Q6UWE3 100 aa7.77□□□□□ -1.17
VPS9D1-207ENST00000568691 Q8N3U1 123 aa7.77□□□□□ -1.17
VPS9D1-207ENST00000568691 SNHG12Q9BXW3 62 aa7.77□□□□□ -1.17
VPS9D1-207ENST00000568691 KLK12Q9UKR0 248 aa7.77□□□□□ -1.17
VPS9D1-207ENST00000568691 IGHV3-64A0A075B6Q5 118 aa7.76□□□□□ -1.17
VPS9D1-207ENST00000568691 COX7A2LO14548 114 aa7.76□□□□□ -1.17
VPS9D1-207ENST00000568691 XCL1P47992 114 aa7.76□□□□□ -1.17
VPS9D1-207ENST00000568691 Q8IZM0 81 aa7.76□□□□□ -1.17
VPS9D1-207ENST00000568691 APOMO95445 188 aa7.75□□□□□ -1.17
VPS9D1-207ENST00000568691 IGHV3-30P01768 117 aa7.75□□□□□ -1.17
VPS9D1-207ENST00000568691 IGHV3-33P01772 117 aa7.75□□□□□ -1.17
VPS9D1-207ENST00000568691 IGHV3-30-5P0DP03 117 aa7.75□□□□□ -1.17
VPS9D1-207ENST00000568691 CXCL5P42830 114 aa7.75□□□□□ -1.17
VPS9D1-207ENST00000568691 FOXI1Q12951 378 aa7.75□□□□□ -1.17
VPS9D1-207ENST00000568691 BVES-AS1Q5T3Y7 98 aa7.75□□□□□ -1.17
VPS9D1-207ENST00000568691 ENHOQ6UWT2 76 aa7.75□□□□□ -1.17
VPS9D1-207ENST00000568691 Q6ZVH6 145 aa7.75□□□□□ -1.17
VPS9D1-207ENST00000568691 CIRBP-AS1Q8TBR5 109 aa7.75□□□□□ -1.17
VPS9D1-207ENST00000568691 COX7B2Q8TF08 81 aa7.75□□□□□ -1.17
VPS9D1-207ENST00000568691 ZNF625Q96I27 306 aaPredicted RBP7.75□□□□□ -1.17
VPS9D1-207ENST00000568691 A0A0J9YXY3 114 aa7.74□□□□□ -1.17
VPS9D1-207ENST00000568691 UBE2WQ96B02 151 aa7.74□□□□□ -1.17
VPS9D1-207ENST00000568691 TM2D2Q9BX73 214 aa7.74□□□□□ -1.17
VPS9D1-207ENST00000568691 TMEM238LA0A1B0GVL6 79 aa7.73□□□□□ -1.17
VPS9D1-207ENST00000568691 A6NDN8 102 aa7.73□□□□□ -1.17
VPS9D1-207ENST00000568691 A6NJY4 79 aa7.73□□□□□ -1.17
VPS9D1-207ENST00000568691 HINT1P49773 126 aaPredicted RBP7.73□□□□□ -1.17
VPS9D1-207ENST00000568691 COL5A1-AS1Q5SY13 56 aa7.73□□□□□ -1.17
VPS9D1-207ENST00000568691 C5orf38Q86SI9 138 aa7.73□□□□□ -1.17
VPS9D1-207ENST00000568691 CEND1Q8N111 149 aa7.73□□□□□ -1.17
VPS9D1-207ENST00000568691 ORAOV1Q8WV07 137 aa7.73□□□□□ -1.17
VPS9D1-207ENST00000568691 COPS9Q8WXC6 57 aa7.73□□□□□ -1.17
VPS9D1-207ENST00000568691 HIST1H4GQ99525 98 aa7.73□□□□□ -1.17
VPS9D1-207ENST00000568691 SPANXDQ9BXN6 97 aa7.73□□□□□ -1.17
VPS9D1-207ENST00000568691 PPDPFQ9H3Y8 114 aa7.73□□□□□ -1.17
VPS9D1-207ENST00000568691 SPANXCQ9NY87 97 aa7.73□□□□□ -1.17
VPS9D1-207ENST00000568691 LPAP08519 4548 aa7.72□□□□□ -1.17
VPS9D1-207ENST00000568691 CIRBPQ14011 172 aaKnown RBP7.72□□□□□ -1.17
VPS9D1-207ENST00000568691 RMI2Q96E14 147 aa7.72□□□□□ -1.17
VPS9D1-207ENST00000568691 C1orf43Q9BWL3 253 aa7.72□□□□□ -1.17
VPS9D1-207ENST00000568691 IGLV10-54A0A075B6I4 117 aa7.71□□□□□ -1.18
VPS9D1-207ENST00000568691 GAGE12HA6NDE8 117 aa7.71□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms