RNA–Protein interactions for RNA: ENST00000568301.1

COMMD4-223, Transcript of COMM domain containing 4, humanhuman

TSL 5

Gene COMMD4, Length 666 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-223ENST00000568301 SMCO4Q9NRQ5 59 aa8.97□□□□□ -0.97
COMMD4-223ENST00000568301 PRSS2P07478 247 aa8.96□□□□□ -0.98
COMMD4-223ENST00000568301 CKS1BP61024 79 aa8.96□□□□□ -0.98
COMMD4-223ENST00000568301 AMELXQ99217 191 aa8.96□□□□□ -0.98
COMMD4-223ENST00000568301 VCX2Q9H322 139 aa8.96□□□□□ -0.98
COMMD4-223ENST00000568301 CYSLTR1Q9Y271 337 aa8.96□□□□□ -0.98
COMMD4-223ENST00000568301 FAT4Q6V0I7 4981 aa8.96□□□□□ -0.98
COMMD4-223ENST00000568301 LOC389332A0A1B0GUA5 103 aa8.95□□□□□ -0.98
COMMD4-223ENST00000568301 NUPR1O60356 82 aa8.95□□□□□ -0.98
COMMD4-223ENST00000568301 NPSP0C0P6 89 aa8.95□□□□□ -0.98
COMMD4-223ENST00000568301 LBHQ53QV2 105 aaPredicted RBP8.95□□□□□ -0.98
COMMD4-223ENST00000568301 C6orf226Q5I0X4 101 aa8.95□□□□□ -0.98
COMMD4-223ENST00000568301 LINC00173Q6ZV60 143 aa8.95□□□□□ -0.98
COMMD4-223ENST00000568301 FAM19A3Q7Z5A8 133 aa8.95□□□□□ -0.98
COMMD4-223ENST00000568301 MAP1LC3AQ9H492 121 aa8.95□□□□□ -0.98
COMMD4-223ENST00000568301 C22orf24Q9Y442 160 aa8.95□□□□□ -0.98
COMMD4-223ENST00000568301 A0A0U1RQV1 116 aa8.94□□□□□ -0.98
COMMD4-223ENST00000568301 C2orf66Q6UXQ4 117 aa8.94□□□□□ -0.98
COMMD4-223ENST00000568301 Q8IZM0 81 aa8.94□□□□□ -0.98
COMMD4-223ENST00000568301 Q8N8P6 123 aa8.94□□□□□ -0.98
COMMD4-223ENST00000568301 YPEL4Q96NS1 127 aa8.94□□□□□ -0.98
COMMD4-223ENST00000568301 K7EMI3 77 aa8.93□□□□□ -0.98
COMMD4-223ENST00000568301 S100A1P23297 94 aa8.93□□□□□ -0.98
COMMD4-223ENST00000568301 ZC2HC1BQ5TFG8 222 aa8.93□□□□□ -0.98
COMMD4-223ENST00000568301 ALKBH7Q9BT30 221 aaPredicted RBP8.93□□□□□ -0.98
COMMD4-223ENST00000568301 TOMM7Q9P0U1 55 aa8.93□□□□□ -0.98
COMMD4-223ENST00000568301 IGIPA6NJ69 53 aa8.92□□□□□ -0.98
COMMD4-223ENST00000568301 SEC11AP67812 179 aa8.92□□□□□ -0.98
COMMD4-223ENST00000568301 ORMDL2Q53FV1 153 aa8.92□□□□□ -0.98
COMMD4-223ENST00000568301 XAGE1AQ9HD64 81 aa8.92□□□□□ -0.98
COMMD4-223ENST00000568301 TP73-AS1Q9UF72 201 aa8.92□□□□□ -0.98
COMMD4-223ENST00000568301 LINC00469Q8N7U9 141 aa8.91□□□□□ -0.98
COMMD4-223ENST00000568301 F8VRH5 84 aa8.9□□□□□ -0.98
COMMD4-223ENST00000568301 HERVK_113P63121 156 aa8.9□□□□□ -0.98
COMMD4-223ENST00000568301 PAPPA-AS1Q5QFB9 102 aa8.9□□□□□ -0.98
COMMD4-223ENST00000568301 LCE2AQ5TA79 106 aaPredicted RBP8.9□□□□□ -0.98
COMMD4-223ENST00000568301 G0S2P27469 103 aa8.89□□□□□ -0.99
COMMD4-223ENST00000568301 RPL28P46779 137 aaKnown RBP8.89□□□□□ -0.99
COMMD4-223ENST00000568301 MRPL55Q7Z7F7 128 aaKnown RBP8.89□□□□□ -0.99
COMMD4-223ENST00000568301 CDKN2A-AS1Q9UH64 79 aa8.89□□□□□ -0.99
COMMD4-223ENST00000568301 KRTAP9-6A0A140TA67 174 aa8.88□□□□□ -0.99
COMMD4-223ENST00000568301 BCE1O60756 84 aa8.88□□□□□ -0.99
COMMD4-223ENST00000568301 TSPAN13O95857 204 aa8.88□□□□□ -0.99
COMMD4-223ENST00000568301 CBLN2Q8IUK8 224 aa8.88□□□□□ -0.99
COMMD4-223ENST00000568301 MRPL18Q9H0U6 180 aaKnown RBP8.88□□□□□ -0.99
COMMD4-223ENST00000568301 NXT2Q9NPJ8 142 aaKnown RBP8.88□□□□□ -0.99
COMMD4-223ENST00000568301 TRAPPC1Q9Y5R8 145 aa8.88□□□□□ -0.99
COMMD4-223ENST00000568301 CRYGAP11844 174 aa8.87□□□□□ -0.99
COMMD4-223ENST00000568301 CXCL5P42830 114 aa8.87□□□□□ -0.99
COMMD4-223ENST00000568301 FABP9Q0Z7S8 132 aa8.87□□□□□ -0.99
COMMD4-223ENST00000568301 GEMIN7Q9H840 131 aaKnown RBP8.87□□□□□ -0.99
COMMD4-223ENST00000568301 A0A087X002 238 aa8.86□□□□□ -0.99
COMMD4-223ENST00000568301 TIMM17AQ99595 171 aa8.86□□□□□ -0.99
COMMD4-223ENST00000568301 COLCA2A8K830 154 aa8.85□□□□□ -0.99
COMMD4-223ENST00000568301 KIAA1644Q3SXP7 199 aa8.85□□□□□ -0.99
COMMD4-223ENST00000568301 TYMSOSQ8TAI1 123 aa8.85□□□□□ -0.99
COMMD4-223ENST00000568301 ATP6V1G1O75348 118 aa8.84□□□□□ -0.99
COMMD4-223ENST00000568301 TOMM6Q96B49 74 aa8.84□□□□□ -0.99
COMMD4-223ENST00000568301 LINC00167Q96N53 147 aa8.84□□□□□ -0.99
COMMD4-223ENST00000568301 PDZD11Q5EBL8 140 aa8.83□□□□□ -1
COMMD4-223ENST00000568301 ERASQ7Z444 233 aa8.83□□□□□ -1
COMMD4-223ENST00000568301 LINC01546A6NGU7 62 aa8.82□□□□□ -1
COMMD4-223ENST00000568301 RPL37AP8A6NKH3 93 aa8.82□□□□□ -1
COMMD4-223ENST00000568301 SMIM1B2RUZ4 78 aa8.82□□□□□ -1
COMMD4-223ENST00000568301 MUC17Q685J3 4493 aa8.81□□□□□ -1
COMMD4-223ENST00000568301 LINC01549A6NIU2 74 aa8.81□□□□□ -1
COMMD4-223ENST00000568301 COX7B2Q8TF08 81 aa8.81□□□□□ -1
COMMD4-223ENST00000568301 IGLV5-37A0A075B6J1 123 aa8.8□□□□□ -1
COMMD4-223ENST00000568301 IGLV5-45A0A087WSX0 123 aa8.8□□□□□ -1
COMMD4-223ENST00000568301 TINCRA0A1B0GVN0 87 aa8.8□□□□□ -1
COMMD4-223ENST00000568301 KRTAP13-1Q8IUC0 172 aa8.8□□□□□ -1
COMMD4-223ENST00000568301 SCGB3A1Q96QR1 104 aa8.8□□□□□ -1
COMMD4-223ENST00000568301 RAB5BP61020 215 aa8.79□□□□□ -1
COMMD4-223ENST00000568301 FAM229BQ4G0N7 80 aa8.79□□□□□ -1
COMMD4-223ENST00000568301 C18orf32Q8TCD1 76 aa8.79□□□□□ -1
COMMD4-223ENST00000568301 GAGE10A6NGK3 116 aa8.78□□□□□ -1
COMMD4-223ENST00000568301 SCO1O75880 301 aa8.78□□□□□ -1
COMMD4-223ENST00000568301 TRGC2P03986 189 aa8.78□□□□□ -1
COMMD4-223ENST00000568301 ANAPC11Q9NYG5 84 aa8.78□□□□□ -1
COMMD4-223ENST00000568301 LINC00614P0C842 121 aa8.77□□□□□ -1.01
COMMD4-223ENST00000568301 UBE2AP49459 152 aa8.77□□□□□ -1.01
COMMD4-223ENST00000568301 KRTAP13-2Q52LG2 175 aa8.77□□□□□ -1.01
COMMD4-223ENST00000568301 NKAPP1Q8N9T2 125 aa8.77□□□□□ -1.01
COMMD4-223ENST00000568301 CST9LQ9H4G1 147 aa8.77□□□□□ -1.01
COMMD4-223ENST00000568301 CTAG1AP78358 180 aa8.75□□□□□ -1.01
COMMD4-223ENST00000568301 FA2HQ7L5A8 372 aa8.75□□□□□ -1.01
COMMD4-223ENST00000568301 LINC00304Q8N9R0 145 aa8.75□□□□□ -1.01
COMMD4-223ENST00000568301 ATP5LO75964 103 aa8.74□□□□□ -1.01
COMMD4-223ENST00000568301 SPINK8P0C7L1 97 aa8.74□□□□□ -1.01
COMMD4-223ENST00000568301 CHCHD1Q96BP2 118 aaKnown RBP8.74□□□□□ -1.01
COMMD4-223ENST00000568301 PMVKQ15126 192 aa8.73□□□□□ -1.01
COMMD4-223ENST00000568301 IGKV2D-26A0A0A0MRZ7 120 aa8.72□□□□□ -1.01
COMMD4-223ENST00000568301 H3BRM9 83 aa8.72□□□□□ -1.01
COMMD4-223ENST00000568301 TPRXLQ17RH7 258 aa8.72□□□□□ -1.01
COMMD4-223ENST00000568301 URB1-AS1Q96HZ7 61 aa8.72□□□□□ -1.01
COMMD4-223ENST00000568301 RETNLBQ9BQ08 111 aa8.72□□□□□ -1.01
COMMD4-223ENST00000568301 IGKV2-28A0A075B6P5 120 aa8.71□□□□□ -1.02
COMMD4-223ENST00000568301 IGKV2D-28P01615 120 aa8.71□□□□□ -1.02
COMMD4-223ENST00000568301 BAGE3Q86Y29 109 aa8.7□□□□□ -1.02
COMMD4-223ENST00000568301 CDIP1Q9H305 208 aa8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 81.6 ms