RNA–Protein interactions for RNA: ENST00000568153.1

CAPN3-218, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 598 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-218ENST00000568153 PKD1L1Q8TDX9 2849 aa4.18□□□□□ -1.74
CAPN3-218ENST00000568153 TRAV8-3A0A0A6YYJ7 113 aa4.17□□□□□ -1.74
CAPN3-218ENST00000568153 IGHV3OR16-9A0A0B4J2B5 98 aa4.17□□□□□ -1.74
CAPN3-218ENST00000568153 IGLL5B9A064 214 aa4.17□□□□□ -1.74
CAPN3-218ENST00000568153 REG3AQ06141 175 aa4.17□□□□□ -1.74
CAPN3-218ENST00000568153 LINC01561Q8N1V8 128 aa4.17□□□□□ -1.74
CAPN3-218ENST00000568153 ORAOV1Q8WV07 137 aa4.17□□□□□ -1.74
CAPN3-218ENST00000568153 NDUFA12Q9UI09 145 aa4.17□□□□□ -1.74
CAPN3-218ENST00000568153 A0A087WZ39 114 aa4.16□□□□□ -1.74
CAPN3-218ENST00000568153 A6NDN8 102 aa4.16□□□□□ -1.74
CAPN3-218ENST00000568153 IGHV3-30P01768 117 aa4.16□□□□□ -1.74
CAPN3-218ENST00000568153 IGHV3-33P01772 117 aa4.16□□□□□ -1.74
CAPN3-218ENST00000568153 IGHV3-30-5P0DP03 117 aa4.16□□□□□ -1.74
CAPN3-218ENST00000568153 XCL1P47992 114 aa4.16□□□□□ -1.74
CAPN3-218ENST00000568153 CCL18P55774 89 aa4.16□□□□□ -1.74
CAPN3-218ENST00000568153 TSPEAR-AS2P59090 65 aa4.16□□□□□ -1.74
CAPN3-218ENST00000568153 CIRBPQ14011 172 aaKnown RBP4.16□□□□□ -1.74
CAPN3-218ENST00000568153 CD164L2Q6UWJ8 174 aa4.16□□□□□ -1.74
CAPN3-218ENST00000568153 C5orf38Q86SI9 138 aa4.16□□□□□ -1.74
CAPN3-218ENST00000568153 CEND1Q8N111 149 aa4.16□□□□□ -1.74
CAPN3-218ENST00000568153 CHCHD10Q8WYQ3 142 aaPredicted RBP4.16□□□□□ -1.74
CAPN3-218ENST00000568153 KLK12Q9UKR0 248 aa4.16□□□□□ -1.74
CAPN3-218ENST00000568153 TRAV8-4A0A0B4J246 113 aa4.15□□□□□ -1.75
CAPN3-218ENST00000568153 A0A0J9YXY3 114 aa4.15□□□□□ -1.75
CAPN3-218ENST00000568153 SMIM1B2RUZ4 78 aa4.15□□□□□ -1.75
CAPN3-218ENST00000568153 COX7A2LO14548 114 aa4.15□□□□□ -1.75
CAPN3-218ENST00000568153 NDUFA1O15239 70 aa4.15□□□□□ -1.75
CAPN3-218ENST00000568153 SMIM13P0DJ93 91 aa4.15□□□□□ -1.75
CAPN3-218ENST00000568153 SEC61BP60468 96 aaKnown RBP4.15□□□□□ -1.75
CAPN3-218ENST00000568153 C6orf226Q5I0X4 101 aa4.15□□□□□ -1.75
CAPN3-218ENST00000568153 ZFAND6Q6FIF0 208 aa4.15□□□□□ -1.75
CAPN3-218ENST00000568153 ENHOQ6UWT2 76 aa4.15□□□□□ -1.75
CAPN3-218ENST00000568153 COX7B2Q8TF08 81 aa4.15□□□□□ -1.75
CAPN3-218ENST00000568153 PRR34Q9NV39 138 aa4.15□□□□□ -1.75
CAPN3-218ENST00000568153 CMYA5Q8N3K9 4069 aa4.15□□□□□ -1.75
CAPN3-218ENST00000568153 TMEM238C9JI98 176 aa4.14□□□□□ -1.75
CAPN3-218ENST00000568153 TIMM17BO60830 172 aa4.14□□□□□ -1.75
CAPN3-218ENST00000568153 HERV-K104P63124 156 aa4.14□□□□□ -1.75
CAPN3-218ENST00000568153 LINC01556Q5JQF7 62 aa4.14□□□□□ -1.75
CAPN3-218ENST00000568153 CLPSL2Q6UWE3 100 aa4.14□□□□□ -1.75
CAPN3-218ENST00000568153 Q6ZVH6 145 aa4.14□□□□□ -1.75
CAPN3-218ENST00000568153 WFDC10BQ8IUB3 73 aa4.14□□□□□ -1.75
CAPN3-218ENST00000568153 C10orf126Q8N4M7 172 aa4.14□□□□□ -1.75
CAPN3-218ENST00000568153 UBE2WQ96B02 151 aa4.14□□□□□ -1.75
CAPN3-218ENST00000568153 SPANXB1Q9NS25 103 aaPredicted RBP4.14□□□□□ -1.75
CAPN3-218ENST00000568153 TOMM7Q9P0U1 55 aa4.14□□□□□ -1.75
CAPN3-218ENST00000568153 ANK2Q01484 3957 aa4.13□□□□□ -1.75
CAPN3-218ENST00000568153 IGLV10-54A0A075B6I4 117 aa4.13□□□□□ -1.75
CAPN3-218ENST00000568153 APOMO95445 188 aa4.13□□□□□ -1.75
CAPN3-218ENST00000568153 CRPP02741 224 aa4.13□□□□□ -1.75
CAPN3-218ENST00000568153 MIAQ16674 131 aa4.13□□□□□ -1.75
CAPN3-218ENST00000568153 SFTA2Q6UW10 78 aa4.13□□□□□ -1.75
CAPN3-218ENST00000568153 MUSTN1Q8IVN3 82 aa4.13□□□□□ -1.75
CAPN3-218ENST00000568153 ZNF625Q96I27 306 aaPredicted RBP4.13□□□□□ -1.75
CAPN3-218ENST00000568153 Q9H8V8 135 aa4.13□□□□□ -1.75
CAPN3-218ENST00000568153 KLK5Q9Y337 293 aaPredicted RBP4.13□□□□□ -1.75
CAPN3-218ENST00000568153 LINC00588Q9Y4M8 146 aa4.13□□□□□ -1.75
CAPN3-218ENST00000568153 DNAH3Q8TD57 4116 aa4.12□□□□□ -1.75
CAPN3-218ENST00000568153 A0A1B0GV90 55 aa4.12□□□□□ -1.75
CAPN3-218ENST00000568153 TAX1BP3O14907 124 aa4.12□□□□□ -1.75
CAPN3-218ENST00000568153 DNAH10OSP0CZ25 163 aa4.12□□□□□ -1.75
CAPN3-218ENST00000568153 IFITM1P13164 125 aa4.12□□□□□ -1.75
CAPN3-218ENST00000568153 FXYD2P54710 66 aa4.12□□□□□ -1.75
CAPN3-218ENST00000568153 RPL24P83731 157 aaKnown RBP4.12□□□□□ -1.75
CAPN3-218ENST00000568153 ADAMTSL4-AS1Q5T5F5 129 aa4.12□□□□□ -1.75
CAPN3-218ENST00000568153 CFAP161Q6P656 301 aa4.12□□□□□ -1.75
CAPN3-218ENST00000568153 Q8IZM0 81 aa4.12□□□□□ -1.75
CAPN3-218ENST00000568153 COPS9Q8WXC6 57 aa4.12□□□□□ -1.75
CAPN3-218ENST00000568153 SPANXDQ9BXN6 97 aa4.12□□□□□ -1.75
CAPN3-218ENST00000568153 SPANXCQ9NY87 97 aa4.12□□□□□ -1.75
CAPN3-218ENST00000568153 IBA57-AS1B1ANH7 110 aa4.11□□□□□ -1.75
CAPN3-218ENST00000568153 K7EP13 123 aa4.11□□□□□ -1.75
CAPN3-218ENST00000568153 CKS1BP61024 79 aa4.11□□□□□ -1.75
CAPN3-218ENST00000568153 MEIG1Q5JSS6 88 aa4.11□□□□□ -1.75
CAPN3-218ENST00000568153 LITAFQ99732 161 aa4.11□□□□□ -1.75
CAPN3-218ENST00000568153 UPK3BQ9BT76 320 aa4.11□□□□□ -1.75
CAPN3-218ENST00000568153 KRTAP2-2Q9BYT5 123 aa4.11□□□□□ -1.75
CAPN3-218ENST00000568153 NHP2Q9NX24 153 aaKnown RBP4.11□□□□□ -1.75
CAPN3-218ENST00000568153 APLNQ9ULZ1 77 aa4.11□□□□□ -1.75
CAPN3-218ENST00000568153 MGAM2Q2M2H8 2515 aa4.11□□□□□ -1.75
CAPN3-218ENST00000568153 TRAV16A0A0A6YYK6 109 aaPredicted RBP4.1□□□□□ -1.75
CAPN3-218ENST00000568153 A0A1B0GWB2 263 aa4.1□□□□□ -1.75
CAPN3-218ENST00000568153 NUPR2A6NF83 97 aa4.1□□□□□ -1.75
CAPN3-218ENST00000568153 LINC00158P58513 81 aa4.1□□□□□ -1.75
CAPN3-218ENST00000568153 KIAA0087Q14695 138 aa4.1□□□□□ -1.75
CAPN3-218ENST00000568153 RAB37Q96AX2 223 aa4.1□□□□□ -1.75
CAPN3-218ENST00000568153 IGKV2D-24A0A075B6R9 120 aa4.09□□□□□ -1.75
CAPN3-218ENST00000568153 A0A0U1RRA0 63 aa4.09□□□□□ -1.75
CAPN3-218ENST00000568153 A4D1N5 150 aa4.09□□□□□ -1.75
CAPN3-218ENST00000568153 CFC1BP0CG36 223 aa4.09□□□□□ -1.75
CAPN3-218ENST00000568153 CFC1P0CG37 223 aa4.09□□□□□ -1.75
CAPN3-218ENST00000568153 CXCL5P42830 114 aa4.09□□□□□ -1.75
CAPN3-218ENST00000568153 KRTAP26-1Q6PEX3 210 aa4.09□□□□□ -1.75
CAPN3-218ENST00000568153 UBE2DNLQ8IWF7 75 aa4.09□□□□□ -1.75
CAPN3-218ENST00000568153 RMI2Q96E14 147 aa4.09□□□□□ -1.75
CAPN3-218ENST00000568153 PFN2P35080 140 aa4.08□□□□□ -1.76
CAPN3-218ENST00000568153 SPAG11BQ08648 103 aa4.08□□□□□ -1.76
CAPN3-218ENST00000568153 COX17Q14061 63 aa4.08□□□□□ -1.76
CAPN3-218ENST00000568153 VAMP3Q15836 100 aa4.08□□□□□ -1.76
CAPN3-218ENST00000568153 C2orf82Q6UX34 121 aa4.08□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms