RNA–Protein interactions for RNA: ENST00000567935.1

COMMD4-221, Transcript of COMM domain containing 4, humanhuman

TSL 3

Gene COMMD4, Length 502 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-221ENST00000567935 PPDPFQ9H3Y8 114 aa9.96□□□□□ -0.82
COMMD4-221ENST00000567935 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.95□□□□□ -0.82
COMMD4-221ENST00000567935 TRAV8-4A0A0B4J246 113 aa9.95□□□□□ -0.82
COMMD4-221ENST00000567935 MIAQ16674 131 aa9.95□□□□□ -0.82
COMMD4-221ENST00000567935 KRTAP4-5Q9BYR2 181 aa9.95□□□□□ -0.82
COMMD4-221ENST00000567935 K7EP13 123 aa9.94□□□□□ -0.82
COMMD4-221ENST00000567935 COX7A2LO14548 114 aa9.94□□□□□ -0.82
COMMD4-221ENST00000567935 XCL1P47992 114 aa9.94□□□□□ -0.82
COMMD4-221ENST00000567935 CHCHD10Q8WYQ3 142 aaPredicted RBP9.94□□□□□ -0.82
COMMD4-221ENST00000567935 VPS13DQ5THJ4 4388 aa9.94□□□□□ -0.82
COMMD4-221ENST00000567935 PKHD1P08F94 4074 aa9.93□□□□□ -0.82
COMMD4-221ENST00000567935 VAMP3Q15836 100 aa9.93□□□□□ -0.82
COMMD4-221ENST00000567935 C5orf38Q86SI9 138 aa9.93□□□□□ -0.82
COMMD4-221ENST00000567935 Q8IZM0 81 aa9.93□□□□□ -0.82
COMMD4-221ENST00000567935 HERC1Q15751 4861 aa9.93□□□□□ -0.82
COMMD4-221ENST00000567935 CRPP02741 224 aa9.92□□□□□ -0.82
COMMD4-221ENST00000567935 PRSS2P07478 247 aa9.92□□□□□ -0.82
COMMD4-221ENST00000567935 CXCL5P42830 114 aa9.92□□□□□ -0.82
COMMD4-221ENST00000567935 CLPSL2Q6UWE3 100 aa9.92□□□□□ -0.82
COMMD4-221ENST00000567935 A0A0B4J2C4 111 aa9.91□□□□□ -0.82
COMMD4-221ENST00000567935 H3BUT2 72 aa9.91□□□□□ -0.82
COMMD4-221ENST00000567935 APOMO95445 188 aa9.91□□□□□ -0.82
COMMD4-221ENST00000567935 ESRGQ1W209 222 aa9.91□□□□□ -0.82
COMMD4-221ENST00000567935 LINC01556Q5JQF7 62 aa9.91□□□□□ -0.82
COMMD4-221ENST00000567935 MEIG1Q5JSS6 88 aa9.91□□□□□ -0.82
COMMD4-221ENST00000567935 MUSTN1Q8IVN3 82 aa9.91□□□□□ -0.82
COMMD4-221ENST00000567935 RAB37Q96AX2 223 aa9.91□□□□□ -0.82
COMMD4-221ENST00000567935 KLK12Q9UKR0 248 aa9.91□□□□□ -0.82
COMMD4-221ENST00000567935 K7ERJ3 54 aa9.9□□□□□ -0.82
COMMD4-221ENST00000567935 FABP2P12104 132 aa9.9□□□□□ -0.82
COMMD4-221ENST00000567935 UBE2V1Q13404 147 aa9.9□□□□□ -0.82
COMMD4-221ENST00000567935 GTF2H5Q6ZYL4 71 aa9.9□□□□□ -0.82
COMMD4-221ENST00000567935 TOMM7Q9P0U1 55 aa9.9□□□□□ -0.82
COMMD4-221ENST00000567935 A0A1W2PPM0 123 aa9.89□□□□□ -0.83
COMMD4-221ENST00000567935 A4D1N5 150 aa9.89□□□□□ -0.83
COMMD4-221ENST00000567935 IBA57-AS1B1ANH7 110 aa9.89□□□□□ -0.83
COMMD4-221ENST00000567935 IGLL5B9A064 214 aa9.89□□□□□ -0.83
COMMD4-221ENST00000567935 MALP21145 153 aa9.89□□□□□ -0.83
COMMD4-221ENST00000567935 C6orf226Q5I0X4 101 aa9.89□□□□□ -0.83
COMMD4-221ENST00000567935 WFDC10BQ8IUB3 73 aa9.89□□□□□ -0.83
COMMD4-221ENST00000567935 IGHV3-33P01772 117 aa9.88□□□□□ -0.83
COMMD4-221ENST00000567935 CFC1BP0CG36 223 aa9.88□□□□□ -0.83
COMMD4-221ENST00000567935 CFC1P0CG37 223 aa9.88□□□□□ -0.83
COMMD4-221ENST00000567935 FOXI1Q12951 378 aa9.88□□□□□ -0.83
COMMD4-221ENST00000567935 ADAMTSL4-AS1Q5T5F5 129 aa9.88□□□□□ -0.83
COMMD4-221ENST00000567935 LYRM7Q5U5X0 104 aa9.88□□□□□ -0.83
COMMD4-221ENST00000567935 ENHOQ6UWT2 76 aa9.88□□□□□ -0.83
COMMD4-221ENST00000567935 Q8N3U1 123 aa9.88□□□□□ -0.83
COMMD4-221ENST00000567935 PRO1854Q9UHT4 67 aa9.88□□□□□ -0.83
COMMD4-221ENST00000567935 FAT2Q9NYQ8 4349 aa9.87□□□□□ -0.83
COMMD4-221ENST00000567935 DNAH6Q9C0G6 4158 aa9.87□□□□□ -0.83
COMMD4-221ENST00000567935 DNAH10OSP0CZ25 163 aa9.87□□□□□ -0.83
COMMD4-221ENST00000567935 CCL18P55774 89 aa9.87□□□□□ -0.83
COMMD4-221ENST00000567935 CFAP161Q6P656 301 aa9.87□□□□□ -0.83
COMMD4-221ENST00000567935 KLK5Q9Y337 293 aaPredicted RBP9.87□□□□□ -0.83
COMMD4-221ENST00000567935 DNAH11Q96DT5 4516 aa9.87□□□□□ -0.83
COMMD4-221ENST00000567935 GAGE12HA6NDE8 117 aa9.86□□□□□ -0.83
COMMD4-221ENST00000567935 UBE2WQ96B02 151 aa9.86□□□□□ -0.83
COMMD4-221ENST00000567935 IGLV10-54A0A075B6I4 117 aa9.85□□□□□ -0.83
COMMD4-221ENST00000567935 GAGE10A6NGK3 116 aa9.85□□□□□ -0.83
COMMD4-221ENST00000567935 K7EP34 96 aa9.85□□□□□ -0.83
COMMD4-221ENST00000567935 CKS1BP61024 79 aa9.85□□□□□ -0.83
COMMD4-221ENST00000567935 LINC00308Q8TCZ7 52 aa9.85□□□□□ -0.83
COMMD4-221ENST00000567935 PGPEP1Q9NXJ5 209 aa9.85□□□□□ -0.83
COMMD4-221ENST00000567935 DNAH2Q9P225 4427 aa9.85□□□□□ -0.83
COMMD4-221ENST00000567935 UPK3BQ9BT76 320 aa9.84□□□□□ -0.83
COMMD4-221ENST00000567935 HSPG2P98160 4391 aa9.84□□□□□ -0.83
COMMD4-221ENST00000567935 COX17Q14061 63 aa9.83□□□□□ -0.84
COMMD4-221ENST00000567935 KIAA0087Q14695 138 aa9.83□□□□□ -0.84
COMMD4-221ENST00000567935 SPCS1Q9Y6A9 102 aa9.83□□□□□ -0.84
COMMD4-221ENST00000567935 TSPAN13O95857 204 aa9.82□□□□□ -0.84
COMMD4-221ENST00000567935 LINC00158P58513 81 aa9.82□□□□□ -0.84
COMMD4-221ENST00000567935 ERG28Q9UKR5 140 aa9.82□□□□□ -0.84
COMMD4-221ENST00000567935 SPAG11BQ08648 103 aa9.81□□□□□ -0.84
COMMD4-221ENST00000567935 NAA38Q9BRA0 125 aaKnown RBP9.81□□□□□ -0.84
COMMD4-221ENST00000567935 C1orf43Q9BWL3 253 aa9.81□□□□□ -0.84
COMMD4-221ENST00000567935 LINC00588Q9Y4M8 146 aa9.81□□□□□ -0.84
COMMD4-221ENST00000567935 F8WDY8 70 aa9.8□□□□□ -0.84
COMMD4-221ENST00000567935 MIR7-3HGQ8N6C7 128 aa9.8□□□□□ -0.84
COMMD4-221ENST00000567935 DAND5Q8N907 189 aa9.8□□□□□ -0.84
COMMD4-221ENST00000567935 KRTAP26-1Q6PEX3 210 aa9.79□□□□□ -0.84
COMMD4-221ENST00000567935 RMI2Q96E14 147 aa9.79□□□□□ -0.84
COMMD4-221ENST00000567935 TRBV20-1A0A075B6N2 111 aa9.78□□□□□ -0.84
COMMD4-221ENST00000567935 GVQW2A0A096LPI5 108 aaPredicted RBP9.78□□□□□ -0.84
COMMD4-221ENST00000567935 A0A0U1RRA0 63 aa9.78□□□□□ -0.84
COMMD4-221ENST00000567935 LOC107984156A0A0G2JMH3 177 aa9.77□□□□□ -0.85
COMMD4-221ENST00000567935 NUPR2A6NF83 97 aa9.77□□□□□ -0.85
COMMD4-221ENST00000567935 EIF4EBP3O60516 100 aaPredicted RBP9.77□□□□□ -0.85
COMMD4-221ENST00000567935 NPC2P61916 151 aa9.77□□□□□ -0.85
COMMD4-221ENST00000567935 SOSTDC1Q6X4U4 206 aa9.77□□□□□ -0.85
COMMD4-221ENST00000567935 ARL17AQ8IVW1 177 aa9.77□□□□□ -0.85
COMMD4-221ENST00000567935 DNAH17Q9UFH2 4485 aa9.77□□□□□ -0.85
COMMD4-221ENST00000567935 TRAV13-2A0A0B4J235 113 aa9.76□□□□□ -0.85
COMMD4-221ENST00000567935 TRBV30A0A0K0K1B3 111 aa9.76□□□□□ -0.85
COMMD4-221ENST00000567935 Q1RN00 199 aa9.76□□□□□ -0.85
COMMD4-221ENST00000567935 C2orf82Q6UX34 121 aa9.76□□□□□ -0.85
COMMD4-221ENST00000567935 UBR4Q5T4S7 5183 aa9.76□□□□□ -0.85
COMMD4-221ENST00000567935 PFN2P35080 140 aa9.75□□□□□ -0.85
COMMD4-221ENST00000567935 PSMB2P49721 201 aa9.75□□□□□ -0.85
COMMD4-221ENST00000567935 NTN5Q8WTR8 489 aaPredicted RBP9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 83.5 ms