RNA–Protein interactions for RNA: ENST00000566121.1

CMTM3-212, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 3 BASIC

Gene CMTM3, Length 572 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-212ENST00000566121 GNB1LQ9BYB4 327 aa9.2□□□□□ -0.94
CMTM3-212ENST00000566121 CXCL5P42830 114 aa9.19□□□□□ -0.94
CMTM3-212ENST00000566121 CKS1BP61024 79 aa9.19□□□□□ -0.94
CMTM3-212ENST00000566121 COX19Q49B96 90 aa9.19□□□□□ -0.94
CMTM3-212ENST00000566121 KRTAP11-1Q8IUC1 163 aa9.19□□□□□ -0.94
CMTM3-212ENST00000566121 SLC7A5P1Q8MH63 180 aa9.19□□□□□ -0.94
CMTM3-212ENST00000566121 TP73-AS1Q9UF72 201 aa9.19□□□□□ -0.94
CMTM3-212ENST00000566121 IGLV5-45A0A087WSX0 123 aa9.18□□□□□ -0.94
CMTM3-212ENST00000566121 M0QXV9 152 aa9.18□□□□□ -0.94
CMTM3-212ENST00000566121 SEC11CQ9BY50 192 aa9.18□□□□□ -0.94
CMTM3-212ENST00000566121 TINCRA0A1B0GVN0 87 aa9.17□□□□□ -0.94
CMTM3-212ENST00000566121 F8VRH5 84 aa9.17□□□□□ -0.94
CMTM3-212ENST00000566121 LBHQ53QV2 105 aaPredicted RBP9.17□□□□□ -0.94
CMTM3-212ENST00000566121 FAM19A5Q7Z5A7 132 aaPredicted RBP9.17□□□□□ -0.94
CMTM3-212ENST00000566121 ALKBH7Q9BT30 221 aaPredicted RBP9.17□□□□□ -0.94
CMTM3-212ENST00000566121 CDKN2A-AS1Q9UH64 79 aa9.17□□□□□ -0.94
CMTM3-212ENST00000566121 CARHSP1Q9Y2V2 147 aaKnown RBP9.17□□□□□ -0.94
CMTM3-212ENST00000566121 NUPR1O60356 82 aa9.16□□□□□ -0.94
CMTM3-212ENST00000566121 KRTAP1-4P0C5Y4 121 aa9.16□□□□□ -0.94
CMTM3-212ENST00000566121 ADCYAP1P18509 176 aa9.16□□□□□ -0.94
CMTM3-212ENST00000566121 PDZD11Q5EBL8 140 aa9.16□□□□□ -0.94
CMTM3-212ENST00000566121 ZC2HC1BQ5TFG8 222 aa9.16□□□□□ -0.94
CMTM3-212ENST00000566121 GEMIN7Q9H840 131 aaKnown RBP9.16□□□□□ -0.94
CMTM3-212ENST00000566121 LPAP08519 4548 aa9.14□□□□□ -0.95
CMTM3-212ENST00000566121 ZNF861PO60384 105 aa9.14□□□□□ -0.95
CMTM3-212ENST00000566121 RPL13AP40429 203 aaKnown RBP9.14□□□□□ -0.95
CMTM3-212ENST00000566121 UBE2BP63146 152 aa9.14□□□□□ -0.95
CMTM3-212ENST00000566121 SCGB3A1Q96QR1 104 aa9.14□□□□□ -0.95
CMTM3-212ENST00000566121 C22orf24Q9Y442 160 aa9.14□□□□□ -0.95
CMTM3-212ENST00000566121 ATP6V1G1O75348 118 aa9.13□□□□□ -0.95
CMTM3-212ENST00000566121 S100PP25815 95 aa9.13□□□□□ -0.95
CMTM3-212ENST00000566121 C10orf91Q5T1B1 145 aa9.13□□□□□ -0.95
CMTM3-212ENST00000566121 TOMM7Q9P0U1 55 aa9.13□□□□□ -0.95
CMTM3-212ENST00000566121 SMIM1B2RUZ4 78 aa9.12□□□□□ -0.95
CMTM3-212ENST00000566121 KIAA1644Q3SXP7 199 aa9.12□□□□□ -0.95
CMTM3-212ENST00000566121 PRR26Q8N8Z3 221 aa9.12□□□□□ -0.95
CMTM3-212ENST00000566121 MRPL18Q9H0U6 180 aaKnown RBP9.12□□□□□ -0.95
CMTM3-212ENST00000566121 CST9LQ9H4G1 147 aa9.12□□□□□ -0.95
CMTM3-212ENST00000566121 S100A1P23297 94 aa9.1□□□□□ -0.95
CMTM3-212ENST00000566121 LINC00469Q8N7U9 141 aa9.1□□□□□ -0.95
CMTM3-212ENST00000566121 IGLV5-37A0A075B6J1 123 aa9.09□□□□□ -0.95
CMTM3-212ENST00000566121 PMVKQ15126 192 aa9.09□□□□□ -0.95
CMTM3-212ENST00000566121 COX7B2Q8TF08 81 aa9.09□□□□□ -0.95
CMTM3-212ENST00000566121 RHEBQ15382 184 aa9.08□□□□□ -0.96
CMTM3-212ENST00000566121 MRPL55Q7Z7F7 128 aaKnown RBP9.08□□□□□ -0.96
CMTM3-212ENST00000566121 XAGE1AQ9HD64 81 aa9.07□□□□□ -0.96
CMTM3-212ENST00000566121 IGLV5-39A0A0G2JS06 123 aa9.06□□□□□ -0.96
CMTM3-212ENST00000566121 H3BRM9 83 aa9.06□□□□□ -0.96
CMTM3-212ENST00000566121 BCE1O60756 84 aa9.06□□□□□ -0.96
CMTM3-212ENST00000566121 IGLC3P0DOY3 106 aa9.05□□□□□ -0.96
CMTM3-212ENST00000566121 RPL28P46779 137 aaKnown RBP9.05□□□□□ -0.96
CMTM3-212ENST00000566121 FABP9Q0Z7S8 132 aa9.05□□□□□ -0.96
CMTM3-212ENST00000566121 FA2HQ7L5A8 372 aa9.05□□□□□ -0.96
CMTM3-212ENST00000566121 COX17Q14061 63 aa9.03□□□□□ -0.96
CMTM3-212ENST00000566121 SFTA2Q6UW10 78 aa9.03□□□□□ -0.96
CMTM3-212ENST00000566121 LINC00167Q96N53 147 aa9.03□□□□□ -0.96
CMTM3-212ENST00000566121 SMCO4Q9NRQ5 59 aa9.03□□□□□ -0.96
CMTM3-212ENST00000566121 CTAG1AP78358 180 aa9.02□□□□□ -0.97
CMTM3-212ENST00000566121 A0A096LNJ9 63 aa9.01□□□□□ -0.97
CMTM3-212ENST00000566121 ATP5LO75964 103 aa9.01□□□□□ -0.97
CMTM3-212ENST00000566121 APOC3P02656 99 aa9.01□□□□□ -0.97
CMTM3-212ENST00000566121 LINC00614P0C842 121 aa9.01□□□□□ -0.97
CMTM3-212ENST00000566121 MUC2Q02817 5179 aa9.01□□□□□ -0.97
CMTM3-212ENST00000566121 KRTAP13-1Q8IUC0 172 aa9.01□□□□□ -0.97
CMTM3-212ENST00000566121 SVBPQ8N300 66 aa9.01□□□□□ -0.97
CMTM3-212ENST00000566121 SPINK8P0C7L1 97 aa9□□□□□ -0.97
CMTM3-212ENST00000566121 RAB5BP61020 215 aa8.99□□□□□ -0.97
CMTM3-212ENST00000566121 C18orf32Q8TCD1 76 aa8.99□□□□□ -0.97
CMTM3-212ENST00000566121 URB1-AS1Q96HZ7 61 aa8.99□□□□□ -0.97
CMTM3-212ENST00000566121 RPS10P5Q9NQ39 176 aa8.99□□□□□ -0.97
CMTM3-212ENST00000566121 SNAPINO95295 136 aa8.98□□□□□ -0.97
CMTM3-212ENST00000566121 HBDP02042 147 aa8.98□□□□□ -0.97
CMTM3-212ENST00000566121 CRYGAP11844 174 aa8.98□□□□□ -0.97
CMTM3-212ENST00000566121 ZNF22P17026 224 aaPredicted RBP8.98□□□□□ -0.97
CMTM3-212ENST00000566121 FAM229BQ4G0N7 80 aa8.97□□□□□ -0.97
CMTM3-212ENST00000566121 NKAPP1Q8N9T2 125 aa8.97□□□□□ -0.97
CMTM3-212ENST00000566121 TRAPPC1Q9Y5R8 145 aa8.97□□□□□ -0.97
CMTM3-212ENST00000566121 RPL24P83731 157 aaKnown RBP8.95□□□□□ -0.98
CMTM3-212ENST00000566121 A0A087X002 238 aa8.94□□□□□ -0.98
CMTM3-212ENST00000566121 RPL37AP8A6NKH3 93 aa8.94□□□□□ -0.98
CMTM3-212ENST00000566121 VPREB1P12018 145 aa8.94□□□□□ -0.98
CMTM3-212ENST00000566121 ERG28Q9UKR5 140 aa8.94□□□□□ -0.98
CMTM3-212ENST00000566121 ZNF625Q96I27 306 aaPredicted RBP8.93□□□□□ -0.98
CMTM3-212ENST00000566121 SND1-IT1Q9HBX3 110 aa8.93□□□□□ -0.98
CMTM3-212ENST00000566121 TRAV12-1A0A0B4J245 112 aa8.92□□□□□ -0.98
CMTM3-212ENST00000566121 C11orf86A6NJI1 115 aa8.91□□□□□ -0.98
CMTM3-212ENST00000566121 BAGE3Q86Y29 109 aa8.91□□□□□ -0.98
CMTM3-212ENST00000566121 TYMSOSQ8TAI1 123 aa8.91□□□□□ -0.98
CMTM3-212ENST00000566121 CHCHD1Q96BP2 118 aaKnown RBP8.91□□□□□ -0.98
CMTM3-212ENST00000566121 GAGE10A6NGK3 116 aa8.9□□□□□ -0.98
CMTM3-212ENST00000566121 PFN2P35080 140 aa8.9□□□□□ -0.98
CMTM3-212ENST00000566121 UBE2AP49459 152 aa8.9□□□□□ -0.98
CMTM3-212ENST00000566121 NDUFA6P56556 154 aa8.9□□□□□ -0.98
CMTM3-212ENST00000566121 YPEL4Q96NS1 127 aa8.9□□□□□ -0.98
CMTM3-212ENST00000566121 PRR4Q16378 134 aa8.89□□□□□ -0.99
CMTM3-212ENST00000566121 TMEM126AQ9H061 195 aa8.89□□□□□ -0.99
CMTM3-212ENST00000566121 KRTAP13-2Q52LG2 175 aa8.88□□□□□ -0.99
CMTM3-212ENST00000566121 MUC17Q685J3 4493 aa8.88□□□□□ -0.99
CMTM3-212ENST00000566121 IGKV2-28A0A075B6P5 120 aa8.87□□□□□ -0.99
CMTM3-212ENST00000566121 IGKV2D-28P01615 120 aa8.87□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms