RNA–Protein interactions for RNA: ENST00000566104.1

TRADD-204, Transcript of TNFRSF1A associated via death domain, humanhuman

TSL 2

Gene TRADD, Length 669 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRADD-204ENST00000566104 ALKBH7Q9BT30 221 aaPredicted RBP12.25□□□□□ -0.45
TRADD-204ENST00000566104 CDKN2A-AS1Q9UH64 79 aa12.24□□□□□ -0.45
TRADD-204ENST00000566104 M0QXV9 152 aa12.23□□□□□ -0.45
TRADD-204ENST00000566104 LINC01546A6NGU7 62 aa12.22□□□□□ -0.45
TRADD-204ENST00000566104 CXCL5P42830 114 aa12.22□□□□□ -0.45
TRADD-204ENST00000566104 SMCO4Q9NRQ5 59 aa12.22□□□□□ -0.45
TRADD-204ENST00000566104 TNXBP22105 4242 aa12.22□□□□□ -0.45
TRADD-204ENST00000566104 IGLV7-43P04211 117 aa12.21□□□□□ -0.45
TRADD-204ENST00000566104 UBE2BP63146 152 aa12.21□□□□□ -0.45
TRADD-204ENST00000566104 C10orf91Q5T1B1 145 aa12.21□□□□□ -0.45
TRADD-204ENST00000566104 CARHSP1Q9Y2V2 147 aaKnown RBP12.21□□□□□ -0.45
TRADD-204ENST00000566104 F8VRH5 84 aa12.2□□□□□ -0.46
TRADD-204ENST00000566104 KRTAP10-8P60410 259 aa12.2□□□□□ -0.46
TRADD-204ENST00000566104 FA2HQ7L5A8 372 aa12.2□□□□□ -0.46
TRADD-204ENST00000566104 LINC00469Q8N7U9 141 aa12.2□□□□□ -0.46
TRADD-204ENST00000566104 DIRC1Q969H9 104 aa12.2□□□□□ -0.46
TRADD-204ENST00000566104 MRPL18Q9H0U6 180 aaKnown RBP12.2□□□□□ -0.46
TRADD-204ENST00000566104 RPS10P5Q9NQ39 176 aa12.2□□□□□ -0.46
TRADD-204ENST00000566104 TINCRA0A1B0GVN0 87 aa12.19□□□□□ -0.46
TRADD-204ENST00000566104 FABP9Q0Z7S8 132 aa12.19□□□□□ -0.46
TRADD-204ENST00000566104 C9orf129Q5T035 196 aaKnown RBP12.19□□□□□ -0.46
TRADD-204ENST00000566104 KRTAP7-1Q8IUC3 87 aa12.17□□□□□ -0.46
TRADD-204ENST00000566104 IGLV5-45A0A087WSX0 123 aa12.16□□□□□ -0.46
TRADD-204ENST00000566104 SMIM1B2RUZ4 78 aa12.16□□□□□ -0.46
TRADD-204ENST00000566104 PDZD11Q5EBL8 140 aa12.16□□□□□ -0.46
TRADD-204ENST00000566104 PMVKQ15126 192 aa12.15□□□□□ -0.46
TRADD-204ENST00000566104 CST9LQ9H4G1 147 aa12.15□□□□□ -0.46
TRADD-204ENST00000566104 H0Y9J4 135 aa12.14□□□□□ -0.47
TRADD-204ENST00000566104 KRTAP11-1Q8IUC1 163 aa12.14□□□□□ -0.47
TRADD-204ENST00000566104 COX7B2Q8TF08 81 aa12.14□□□□□ -0.47
TRADD-204ENST00000566104 ODF1Q14990 250 aa12.13□□□□□ -0.47
TRADD-204ENST00000566104 XAGE1AQ9HD64 81 aa12.12□□□□□ -0.47
TRADD-204ENST00000566104 H3BRM9 83 aa12.11□□□□□ -0.47
TRADD-204ENST00000566104 NDUFA5Q16718 116 aa12.11□□□□□ -0.47
TRADD-204ENST00000566104 LBHQ53QV2 105 aaPredicted RBP12.11□□□□□ -0.47
TRADD-204ENST00000566104 TRAPPC1Q9Y5R8 145 aa12.11□□□□□ -0.47
TRADD-204ENST00000566104 UBR4Q5T4S7 5183 aa12.1□□□□□ -0.47
TRADD-204ENST00000566104 NUPR1O60356 82 aa12.09□□□□□ -0.47
TRADD-204ENST00000566104 SPINK8P0C7L1 97 aa12.09□□□□□ -0.47
TRADD-204ENST00000566104 TP73-AS1Q9UF72 201 aa12.09□□□□□ -0.47
TRADD-204ENST00000566104 C22orf24Q9Y442 160 aa12.09□□□□□ -0.47
TRADD-204ENST00000566104 SNAPINO95295 136 aa12.08□□□□□ -0.48
TRADD-204ENST00000566104 C18orf32Q8TCD1 76 aa12.08□□□□□ -0.48
TRADD-204ENST00000566104 HBDP02042 147 aa12.07□□□□□ -0.48
TRADD-204ENST00000566104 APOC3P02656 99 aa12.07□□□□□ -0.48
TRADD-204ENST00000566104 LINC00614P0C842 121 aa12.07□□□□□ -0.48
TRADD-204ENST00000566104 SVBPQ8N300 66 aa12.07□□□□□ -0.48
TRADD-204ENST00000566104 IGLC3P0DOY3 106 aa12.06□□□□□ -0.48
TRADD-204ENST00000566104 RAB5BP61020 215 aa12.06□□□□□ -0.48
TRADD-204ENST00000566104 MRPL55Q7Z7F7 128 aaKnown RBP12.06□□□□□ -0.48
TRADD-204ENST00000566104 IGLV1-50A0A075B6I6 118 aa12.05□□□□□ -0.48
TRADD-204ENST00000566104 A0A096LNJ9 63 aa12.05□□□□□ -0.48
TRADD-204ENST00000566104 ATP5LO75964 103 aa12.05□□□□□ -0.48
TRADD-204ENST00000566104 NDUFA6P56556 154 aa12.05□□□□□ -0.48
TRADD-204ENST00000566104 PRR26Q8N8Z3 221 aa12.04□□□□□ -0.48
TRADD-204ENST00000566104 ZNF861PO60384 105 aa12.03□□□□□ -0.48
TRADD-204ENST00000566104 URB1-AS1Q96HZ7 61 aa12.03□□□□□ -0.48
TRADD-204ENST00000566104 IGLV5-39A0A0G2JS06 123 aa12.01□□□□□ -0.49
TRADD-204ENST00000566104 KRTAP1-4P0C5Y4 121 aa12.01□□□□□ -0.49
TRADD-204ENST00000566104 ZNF22P17026 224 aaPredicted RBP12.01□□□□□ -0.49
TRADD-204ENST00000566104 RPL13AP40429 203 aaKnown RBP12.01□□□□□ -0.49
TRADD-204ENST00000566104 PMCHL1Q16048 86 aa12□□□□□ -0.49
TRADD-204ENST00000566104 NKAPP1Q8N9T2 125 aa12□□□□□ -0.49
TRADD-204ENST00000566104 IGLV5-37A0A075B6J1 123 aa11.98□□□□□ -0.49
TRADD-204ENST00000566104 RPL28P46779 137 aaKnown RBP11.98□□□□□ -0.49
TRADD-204ENST00000566104 SFTA2Q6UW10 78 aa11.98□□□□□ -0.49
TRADD-204ENST00000566104 BCE1O60756 84 aa11.97□□□□□ -0.49
TRADD-204ENST00000566104 BAGE3Q86Y29 109 aa11.97□□□□□ -0.49
TRADD-204ENST00000566104 LINC00167Q96N53 147 aa11.97□□□□□ -0.49
TRADD-204ENST00000566104 LRP2P98164 4655 aa11.97□□□□□ -0.49
TRADD-204ENST00000566104 PFN2P35080 140 aa11.95□□□□□ -0.5
TRADD-204ENST00000566104 COX17Q14061 63 aa11.95□□□□□ -0.5
TRADD-204ENST00000566104 TMEM170BQ5T4T1 132 aa11.95□□□□□ -0.5
TRADD-204ENST00000566104 ERG28Q9UKR5 140 aa11.95□□□□□ -0.5
TRADD-204ENST00000566104 C11orf86A6NJI1 115 aa11.94□□□□□ -0.5
TRADD-204ENST00000566104 RPL37AP8A6NKH3 93 aa11.94□□□□□ -0.5
TRADD-204ENST00000566104 CHCHD1Q96BP2 118 aaKnown RBP11.94□□□□□ -0.5
TRADD-204ENST00000566104 GAGE10A6NGK3 116 aa11.93□□□□□ -0.5
TRADD-204ENST00000566104 YPEL4Q96NS1 127 aa11.92□□□□□ -0.5
TRADD-204ENST00000566104 CHTOPQ9Y3Y2 248 aaKnown RBP11.92□□□□□ -0.5
TRADD-204ENST00000566104 RPL24P83731 157 aaKnown RBP11.9□□□□□ -0.5
TRADD-204ENST00000566104 SND1-IT1Q9HBX3 110 aa11.9□□□□□ -0.5
TRADD-204ENST00000566104 TRAV12-1A0A0B4J245 112 aa11.89□□□□□ -0.51
TRADD-204ENST00000566104 UBE2AP49459 152 aa11.89□□□□□ -0.51
TRADD-204ENST00000566104 IFI27L1Q96BM0 104 aa11.89□□□□□ -0.51
TRADD-204ENST00000566104 ZNF625Q96I27 306 aaPredicted RBP11.88□□□□□ -0.51
TRADD-204ENST00000566104 IGKV2-28A0A075B6P5 120 aa11.87□□□□□ -0.51
TRADD-204ENST00000566104 IGKV2D-28P01615 120 aa11.87□□□□□ -0.51
TRADD-204ENST00000566104 VPREB1P12018 145 aa11.87□□□□□ -0.51
TRADD-204ENST00000566104 HSBP1O75506 76 aa11.86□□□□□ -0.51
TRADD-204ENST00000566104 TMEM223A0PJW6 202 aa11.84□□□□□ -0.51
TRADD-204ENST00000566104 CRYGAP11844 174 aa11.84□□□□□ -0.51
TRADD-204ENST00000566104 KRTAP13-1Q8IUC0 172 aa11.84□□□□□ -0.51
TRADD-204ENST00000566104 CBLN2Q8IUK8 224 aa11.84□□□□□ -0.51
TRADD-204ENST00000566104 SCO1O75880 301 aa11.83□□□□□ -0.52
TRADD-204ENST00000566104 LINC00158P58513 81 aa11.82□□□□□ -0.52
TRADD-204ENST00000566104 TMEM126AQ9H061 195 aa11.81□□□□□ -0.52
TRADD-204ENST00000566104 A0A087X002 238 aa11.8□□□□□ -0.52
TRADD-204ENST00000566104 TYMSOSQ8TAI1 123 aa11.8□□□□□ -0.52
TRADD-204ENST00000566104 ATP6V1G1O75348 118 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 84.5 ms