RNA–Protein interactions for RNA: ENST00000565511.5

RAB40C-209, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 783 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-209ENST00000565511 CLLU1Q5K131 121 aa14.24□□□□□ -0.13
RAB40C-209ENST00000565511 TIMM17AQ99595 171 aa14.24□□□□□ -0.13
RAB40C-209ENST00000565511 C6orf226Q5I0X4 101 aa14.23□□□□□ -0.13
RAB40C-209ENST00000565511 HERVK_113P63121 156 aa14.22□□□□□ -0.13
RAB40C-209ENST00000565511 C22orf24Q9Y442 160 aa14.22□□□□□ -0.13
RAB40C-209ENST00000565511 SMIM1B2RUZ4 78 aa14.2□□□□□ -0.14
RAB40C-209ENST00000565511 IGLV1-50A0A075B6I6 118 aa14.19□□□□□ -0.14
RAB40C-209ENST00000565511 GEMIN7Q9H840 131 aaKnown RBP14.19□□□□□ -0.14
RAB40C-209ENST00000565511 F8VRH5 84 aa14.18□□□□□ -0.14
RAB40C-209ENST00000565511 TMEM218A2RU14 115 aa14.17□□□□□ -0.14
RAB40C-209ENST00000565511 IFITM2Q01629 132 aa14.17□□□□□ -0.14
RAB40C-209ENST00000565511 PAPPA-AS1Q5QFB9 102 aa14.17□□□□□ -0.14
RAB40C-209ENST00000565511 ERASQ7Z444 233 aa14.17□□□□□ -0.14
RAB40C-209ENST00000565511 SCGB3A1Q96QR1 104 aa14.17□□□□□ -0.14
RAB40C-209ENST00000565511 SEC11AP67812 179 aa14.16□□□□□ -0.14
RAB40C-209ENST00000565511 IGLV5-45A0A087WSX0 123 aa14.15□□□□□ -0.14
RAB40C-209ENST00000565511 LINC01546A6NGU7 62 aa14.15□□□□□ -0.14
RAB40C-209ENST00000565511 ZNF861PO60384 105 aa14.15□□□□□ -0.14
RAB40C-209ENST00000565511 TRAV9-1A0A075B6T8 112 aa14.13□□□□□ -0.15
RAB40C-209ENST00000565511 TINCRA0A1B0GVN0 87 aa14.13□□□□□ -0.15
RAB40C-209ENST00000565511 COX7B2Q8TF08 81 aa14.13□□□□□ -0.15
RAB40C-209ENST00000565511 SPINK8P0C7L1 97 aa14.12□□□□□ -0.15
RAB40C-209ENST00000565511 G0S2P27469 103 aa14.12□□□□□ -0.15
RAB40C-209ENST00000565511 UQCC3Q6UW78 93 aa14.12□□□□□ -0.15
RAB40C-209ENST00000565511 CXCL5P42830 114 aa14.11□□□□□ -0.15
RAB40C-209ENST00000565511 PDZD11Q5EBL8 140 aa14.11□□□□□ -0.15
RAB40C-209ENST00000565511 MRPL55Q7Z7F7 128 aaKnown RBP14.11□□□□□ -0.15
RAB40C-209ENST00000565511 GNB1LQ9BYB4 327 aa14.11□□□□□ -0.15
RAB40C-209ENST00000565511 CST9LQ9H4G1 147 aa14.11□□□□□ -0.15
RAB40C-209ENST00000565511 NUPR1O60356 82 aa14.1□□□□□ -0.15
RAB40C-209ENST00000565511 LBHQ53QV2 105 aaPredicted RBP14.1□□□□□ -0.15
RAB40C-209ENST00000565511 TP73-AS1Q9UF72 201 aa14.1□□□□□ -0.15
RAB40C-209ENST00000565511 LINC00167Q96N53 147 aa14.08□□□□□ -0.16
RAB40C-209ENST00000565511 RPL37AP8A6NKH3 93 aa14.07□□□□□ -0.16
RAB40C-209ENST00000565511 SEC11CQ9BY50 192 aa14.07□□□□□ -0.16
RAB40C-209ENST00000565511 A0A087X002 238 aa14.06□□□□□ -0.16
RAB40C-209ENST00000565511 GAGE10A6NGK3 116 aa14.06□□□□□ -0.16
RAB40C-209ENST00000565511 BCE1O60756 84 aa14.06□□□□□ -0.16
RAB40C-209ENST00000565511 RPL13AP40429 203 aaKnown RBP14.06□□□□□ -0.16
RAB40C-209ENST00000565511 MRPL18Q9H0U6 180 aaKnown RBP14.06□□□□□ -0.16
RAB40C-209ENST00000565511 CARHSP1Q9Y2V2 147 aaKnown RBP14.06□□□□□ -0.16
RAB40C-209ENST00000565511 A0A096LNJ9 63 aa14.05□□□□□ -0.16
RAB40C-209ENST00000565511 RAB5BP61020 215 aa14.05□□□□□ -0.16
RAB40C-209ENST00000565511 PMVKQ15126 192 aa14.05□□□□□ -0.16
RAB40C-209ENST00000565511 SCO1O75880 301 aa14.04□□□□□ -0.16
RAB40C-209ENST00000565511 S100PP25815 95 aa14.04□□□□□ -0.16
RAB40C-209ENST00000565511 URB1-AS1Q96HZ7 61 aa14.04□□□□□ -0.16
RAB40C-209ENST00000565511 FA2HQ7L5A8 372 aa14.03□□□□□ -0.16
RAB40C-209ENST00000565511 IGLV5-37A0A075B6J1 123 aa14.02□□□□□ -0.17
RAB40C-209ENST00000565511 FABP9Q0Z7S8 132 aa14.02□□□□□ -0.17
RAB40C-209ENST00000565511 COMMD7Q86VX2 200 aa14.02□□□□□ -0.17
RAB40C-209ENST00000565511 PRR4Q16378 134 aa14.01□□□□□ -0.17
RAB40C-209ENST00000565511 RPL28P46779 137 aaKnown RBP14□□□□□ -0.17
RAB40C-209ENST00000565511 C10orf91Q5T1B1 145 aa14□□□□□ -0.17
RAB40C-209ENST00000565511 KRTAP13-1Q8IUC0 172 aa14□□□□□ -0.17
RAB40C-209ENST00000565511 ANAPC11Q9NYG5 84 aa14□□□□□ -0.17
RAB40C-209ENST00000565511 LINC01549A6NIU2 74 aa13.99□□□□□ -0.17
RAB40C-209ENST00000565511 IGLC3P0DOY3 106 aa13.99□□□□□ -0.17
RAB40C-209ENST00000565511 SMCO4Q9NRQ5 59 aa13.99□□□□□ -0.17
RAB40C-209ENST00000565511 IGLV5-39A0A0G2JS06 123 aa13.98□□□□□ -0.17
RAB40C-209ENST00000565511 TSPAN13O95857 204 aa13.98□□□□□ -0.17
RAB40C-209ENST00000565511 ZNF22P17026 224 aaPredicted RBP13.97□□□□□ -0.17
RAB40C-209ENST00000565511 PMCHL1Q16048 86 aa13.96□□□□□ -0.17
RAB40C-209ENST00000565511 COX19Q49B96 90 aa13.96□□□□□ -0.17
RAB40C-209ENST00000565511 RPS10P5Q9NQ39 176 aa13.96□□□□□ -0.17
RAB40C-209ENST00000565511 KRTAP13-2Q52LG2 175 aa13.95□□□□□ -0.18
RAB40C-209ENST00000565511 Q8NDZ9 215 aa13.95□□□□□ -0.18
RAB40C-209ENST00000565511 C18orf32Q8TCD1 76 aa13.95□□□□□ -0.18
RAB40C-209ENST00000565511 IGKV2-28A0A075B6P5 120 aa13.94□□□□□ -0.18
RAB40C-209ENST00000565511 H3BRM9 83 aa13.94□□□□□ -0.18
RAB40C-209ENST00000565511 IGKV2D-28P01615 120 aa13.94□□□□□ -0.18
RAB40C-209ENST00000565511 PFN2P35080 140 aa13.94□□□□□ -0.18
RAB40C-209ENST00000565511 NKAPP1Q8N9T2 125 aa13.94□□□□□ -0.18
RAB40C-209ENST00000565511 MUC2Q02817 5179 aa13.93□□□□□ -0.18
RAB40C-209ENST00000565511 ATP5LO75964 103 aa13.93□□□□□ -0.18
RAB40C-209ENST00000565511 NDUFA6P56556 154 aa13.93□□□□□ -0.18
RAB40C-209ENST00000565511 RHEBQ15382 184 aa13.93□□□□□ -0.18
RAB40C-209ENST00000565511 VPREB1P12018 145 aa13.92□□□□□ -0.18
RAB40C-209ENST00000565511 CRYGAP11844 174 aa13.91□□□□□ -0.18
RAB40C-209ENST00000565511 TYMSOSQ8TAI1 123 aa13.91□□□□□ -0.18
RAB40C-209ENST00000565511 SND1-IT1Q9HBX3 110 aa13.91□□□□□ -0.18
RAB40C-209ENST00000565511 C11orf86A6NJI1 115 aa13.9□□□□□ -0.18
RAB40C-209ENST00000565511 UBE2AP49459 152 aa13.89□□□□□ -0.19
RAB40C-209ENST00000565511 ZNF625Q96I27 306 aaPredicted RBP13.89□□□□□ -0.19
RAB40C-209ENST00000565511 ERG28Q9UKR5 140 aa13.89□□□□□ -0.19
RAB40C-209ENST00000565511 TMEM238C9JI98 176 aa13.88□□□□□ -0.19
RAB40C-209ENST00000565511 HBDP02042 147 aa13.88□□□□□ -0.19
RAB40C-209ENST00000565511 LINC00614P0C842 121 aa13.88□□□□□ -0.19
RAB40C-209ENST00000565511 PRLHP81277 87 aa13.88□□□□□ -0.19
RAB40C-209ENST00000565511 TRAPPC1Q9Y5R8 145 aa13.88□□□□□ -0.19
RAB40C-209ENST00000565511 TMEM126AQ9H061 195 aa13.84□□□□□ -0.19
RAB40C-209ENST00000565511 BAGE3Q86Y29 109 aa13.83□□□□□ -0.2
RAB40C-209ENST00000565511 M0R378 163 aa13.82□□□□□ -0.2
RAB40C-209ENST00000565511 TMEM170BQ5T4T1 132 aa13.81□□□□□ -0.2
RAB40C-209ENST00000565511 FAM19A1Q7Z5A9 133 aa13.81□□□□□ -0.2
RAB40C-209ENST00000565511 RETNLBQ9BQ08 111 aa13.81□□□□□ -0.2
RAB40C-209ENST00000565511 FAM229BQ4G0N7 80 aa13.8□□□□□ -0.2
RAB40C-209ENST00000565511 COX17Q14061 63 aa13.78□□□□□ -0.2
RAB40C-209ENST00000565511 APOC3P02656 99 aa13.77□□□□□ -0.21
RAB40C-209ENST00000565511 LINC00304Q8N9R0 145 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms