RNA–Protein interactions for RNA: ENST00000565471.6

CLN6-206, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2 BASIC

Gene CLN6, Length 1,075 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-206ENST00000565471 ALKBH7Q9BT30 221 aaPredicted RBP12.08□□□□□ -0.48
CLN6-206ENST00000565471 GEMIN7Q9H840 131 aaKnown RBP12.08□□□□□ -0.48
CLN6-206ENST00000565471 H0Y9J4 135 aa12.07□□□□□ -0.48
CLN6-206ENST00000565471 UBE2BP63146 152 aa12.07□□□□□ -0.48
CLN6-206ENST00000565471 SEC11CQ9BY50 192 aa12.07□□□□□ -0.48
CLN6-206ENST00000565471 LINC01549A6NIU2 74 aa12.06□□□□□ -0.48
CLN6-206ENST00000565471 S100PP25815 95 aa12.06□□□□□ -0.48
CLN6-206ENST00000565471 IFITM2Q01629 132 aa12.06□□□□□ -0.48
CLN6-206ENST00000565471 SCGB3A1Q96QR1 104 aa12.06□□□□□ -0.48
CLN6-206ENST00000565471 GNB1LQ9BYB4 327 aa12.06□□□□□ -0.48
CLN6-206ENST00000565471 LINC01546A6NGU7 62 aa12.05□□□□□ -0.48
CLN6-206ENST00000565471 F8VRH5 84 aa12.04□□□□□ -0.48
CLN6-206ENST00000565471 CXCL5P42830 114 aa12.04□□□□□ -0.48
CLN6-206ENST00000565471 COX19Q49B96 90 aa12.04□□□□□ -0.48
CLN6-206ENST00000565471 LINC00469Q8N7U9 141 aa12.02□□□□□ -0.49
CLN6-206ENST00000565471 IGLV5-45A0A087WSX0 123 aa12.01□□□□□ -0.49
CLN6-206ENST00000565471 TINCRA0A1B0GVN0 87 aa12.01□□□□□ -0.49
CLN6-206ENST00000565471 SMIM1B2RUZ4 78 aa12.01□□□□□ -0.49
CLN6-206ENST00000565471 PRR26Q8N8Z3 221 aa12.01□□□□□ -0.49
CLN6-206ENST00000565471 LRP2P98164 4655 aa12□□□□□ -0.49
CLN6-206ENST00000565471 PDZD11Q5EBL8 140 aa12□□□□□ -0.49
CLN6-206ENST00000565471 XAGE1AQ9HD64 81 aa12□□□□□ -0.49
CLN6-206ENST00000565471 IGLV1-50A0A075B6I6 118 aa11.99□□□□□ -0.49
CLN6-206ENST00000565471 C22orf24Q9Y442 160 aa11.99□□□□□ -0.49
CLN6-206ENST00000565471 KRTAP1-4P0C5Y4 121 aa11.98□□□□□ -0.49
CLN6-206ENST00000565471 LBHQ53QV2 105 aaPredicted RBP11.98□□□□□ -0.49
CLN6-206ENST00000565471 COMMD7Q86VX2 200 aa11.98□□□□□ -0.49
CLN6-206ENST00000565471 CST9LQ9H4G1 147 aa11.98□□□□□ -0.49
CLN6-206ENST00000565471 NUPR1O60356 82 aa11.97□□□□□ -0.49
CLN6-206ENST00000565471 C10orf91Q5T1B1 145 aa11.97□□□□□ -0.49
CLN6-206ENST00000565471 FA2HQ7L5A8 372 aa11.97□□□□□ -0.49
CLN6-206ENST00000565471 COX7B2Q8TF08 81 aa11.97□□□□□ -0.49
CLN6-206ENST00000565471 MRPL18Q9H0U6 180 aaKnown RBP11.97□□□□□ -0.49
CLN6-206ENST00000565471 TP73-AS1Q9UF72 201 aa11.97□□□□□ -0.49
CLN6-206ENST00000565471 PMVKQ15126 192 aa11.96□□□□□ -0.49
CLN6-206ENST00000565471 SMCO4Q9NRQ5 59 aa11.96□□□□□ -0.49
CLN6-206ENST00000565471 ZNF861PO60384 105 aa11.95□□□□□ -0.5
CLN6-206ENST00000565471 FABP9Q0Z7S8 132 aa11.95□□□□□ -0.5
CLN6-206ENST00000565471 RHEBQ15382 184 aa11.95□□□□□ -0.5
CLN6-206ENST00000565471 CARHSP1Q9Y2V2 147 aaKnown RBP11.95□□□□□ -0.5
CLN6-206ENST00000565471 MRPL55Q7Z7F7 128 aaKnown RBP11.93□□□□□ -0.5
CLN6-206ENST00000565471 RPS10P5Q9NQ39 176 aa11.93□□□□□ -0.5
CLN6-206ENST00000565471 SPINK8P0C7L1 97 aa11.92□□□□□ -0.5
CLN6-206ENST00000565471 RPL13AP40429 203 aaKnown RBP11.92□□□□□ -0.5
CLN6-206ENST00000565471 H3BRM9 83 aa11.91□□□□□ -0.5
CLN6-206ENST00000565471 IGLC3P0DOY3 106 aa11.89□□□□□ -0.51
CLN6-206ENST00000565471 A0A096LNJ9 63 aa11.88□□□□□ -0.51
CLN6-206ENST00000565471 BCE1O60756 84 aa11.88□□□□□ -0.51
CLN6-206ENST00000565471 IGLV5-37A0A075B6J1 123 aa11.87□□□□□ -0.51
CLN6-206ENST00000565471 C18orf32Q8TCD1 76 aa11.87□□□□□ -0.51
CLN6-206ENST00000565471 LINC00167Q96N53 147 aa11.87□□□□□ -0.51
CLN6-206ENST00000565471 IGLV5-39A0A0G2JS06 123 aa11.86□□□□□ -0.51
CLN6-206ENST00000565471 ATP5LO75964 103 aa11.86□□□□□ -0.51
CLN6-206ENST00000565471 RPL28P46779 137 aaKnown RBP11.86□□□□□ -0.51
CLN6-206ENST00000565471 URB1-AS1Q96HZ7 61 aa11.86□□□□□ -0.51
CLN6-206ENST00000565471 TRAPPC1Q9Y5R8 145 aa11.86□□□□□ -0.51
CLN6-206ENST00000565471 LINC00614P0C842 121 aa11.85□□□□□ -0.51
CLN6-206ENST00000565471 RAB5BP61020 215 aa11.85□□□□□ -0.51
CLN6-206ENST00000565471 HBDP02042 147 aa11.84□□□□□ -0.51
CLN6-206ENST00000565471 RPL37AP8A6NKH3 93 aa11.83□□□□□ -0.52
CLN6-206ENST00000565471 ZNF22P17026 224 aaPredicted RBP11.83□□□□□ -0.52
CLN6-206ENST00000565471 NDUFA6P56556 154 aa11.83□□□□□ -0.52
CLN6-206ENST00000565471 NKAPP1Q8N9T2 125 aa11.82□□□□□ -0.52
CLN6-206ENST00000565471 GAGE10A6NGK3 116 aa11.8□□□□□ -0.52
CLN6-206ENST00000565471 APOC3P02656 99 aa11.79□□□□□ -0.52
CLN6-206ENST00000565471 PFN2P35080 140 aa11.79□□□□□ -0.52
CLN6-206ENST00000565471 PMCHL1Q16048 86 aa11.79□□□□□ -0.52
CLN6-206ENST00000565471 SNAPINO95295 136 aa11.78□□□□□ -0.52
CLN6-206ENST00000565471 COX17Q14061 63 aa11.78□□□□□ -0.52
CLN6-206ENST00000565471 SFTA2Q6UW10 78 aa11.78□□□□□ -0.52
CLN6-206ENST00000565471 ERG28Q9UKR5 140 aa11.78□□□□□ -0.52
CLN6-206ENST00000565471 NDUFA5Q16718 116 aa11.77□□□□□ -0.53
CLN6-206ENST00000565471 BAGE3Q86Y29 109 aa11.77□□□□□ -0.53
CLN6-206ENST00000565471 KRTAP13-1Q8IUC0 172 aa11.77□□□□□ -0.53
CLN6-206ENST00000565471 SVBPQ8N300 66 aa11.77□□□□□ -0.53
CLN6-206ENST00000565471 C11orf86A6NJI1 115 aa11.76□□□□□ -0.53
CLN6-206ENST00000565471 SND1-IT1Q9HBX3 110 aa11.76□□□□□ -0.53
CLN6-206ENST00000565471 A0A087X002 238 aa11.75□□□□□ -0.53
CLN6-206ENST00000565471 CRYGAP11844 174 aa11.75□□□□□ -0.53
CLN6-206ENST00000565471 VPREB1P12018 145 aa11.75□□□□□ -0.53
CLN6-206ENST00000565471 UBE2AP49459 152 aa11.75□□□□□ -0.53
CLN6-206ENST00000565471 TMEM170BQ5T4T1 132 aa11.74□□□□□ -0.53
CLN6-206ENST00000565471 RNF213Q63HN8 5207 aa11.73□□□□□ -0.53
CLN6-206ENST00000565471 IGKV2-28A0A075B6P5 120 aa11.73□□□□□ -0.53
CLN6-206ENST00000565471 SCO1O75880 301 aa11.73□□□□□ -0.53
CLN6-206ENST00000565471 IGKV2D-28P01615 120 aa11.73□□□□□ -0.53
CLN6-206ENST00000565471 RPL24P83731 157 aaKnown RBP11.73□□□□□ -0.53
CLN6-206ENST00000565471 PRR4Q16378 134 aa11.72□□□□□ -0.53
CLN6-206ENST00000565471 ZNF625Q96I27 306 aaPredicted RBP11.72□□□□□ -0.53
CLN6-206ENST00000565471 TYMSOSQ8TAI1 123 aa11.71□□□□□ -0.53
CLN6-206ENST00000565471 CHCHD1Q96BP2 118 aaKnown RBP11.71□□□□□ -0.53
CLN6-206ENST00000565471 CHTOPQ9Y3Y2 248 aaKnown RBP11.71□□□□□ -0.53
CLN6-206ENST00000565471 LPAP08519 4548 aa11.7□□□□□ -0.54
CLN6-206ENST00000565471 YPEL4Q96NS1 127 aa11.7□□□□□ -0.54
CLN6-206ENST00000565471 TRAV12-1A0A0B4J245 112 aa11.69□□□□□ -0.54
CLN6-206ENST00000565471 FAM229BQ4G0N7 80 aa11.69□□□□□ -0.54
CLN6-206ENST00000565471 TMEM126AQ9H061 195 aa11.69□□□□□ -0.54
CLN6-206ENST00000565471 TMEM223A0PJW6 202 aa11.67□□□□□ -0.54
CLN6-206ENST00000565471 TSPAN13O95857 204 aa11.67□□□□□ -0.54
CLN6-206ENST00000565471 IFI27L1Q96BM0 104 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 156.1 ms