RNA–Protein interactions for RNA: ENST00000565038.1

PALB2-203, Transcript of partner and localizer of BRCA2, humanhuman

TSL 3

Gene PALB2, Length 344 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-203ENST00000565038 TMEM14BQ9NUH8 114 aa0.87□□□□□ -2.27
PALB2-203ENST00000565038 MED9Q9NWA0 146 aa0.87□□□□□ -2.27
PALB2-203ENST00000565038 A0A087WXM4 84 aa0.86□□□□□ -2.27
PALB2-203ENST00000565038 TRBV6-8A0A0A6YYG3 113 aa0.86□□□□□ -2.27
PALB2-203ENST00000565038 TRAV10A0A0B4J240 114 aa0.86□□□□□ -2.27
PALB2-203ENST00000565038 SMIM31A0A1B0GVY4 71 aa0.86□□□□□ -2.27
PALB2-203ENST00000565038 C7orf71A4D174 169 aa0.86□□□□□ -2.27
PALB2-203ENST00000565038 FAM24AA6NFZ4 105 aa0.86□□□□□ -2.27
PALB2-203ENST00000565038 CRYM-AS1A6NIL9 109 aa0.86□□□□□ -2.27
PALB2-203ENST00000565038 CEBPZOSA8MTT3 80 aa0.86□□□□□ -2.27
PALB2-203ENST00000565038 H3BQ15 152 aa0.86□□□□□ -2.27
PALB2-203ENST00000565038 M0R2Z0 102 aa0.86□□□□□ -2.27
PALB2-203ENST00000565038 TIMM17BO60830 172 aa0.86□□□□□ -2.27
PALB2-203ENST00000565038 PITX3O75364 302 aa0.86□□□□□ -2.27
PALB2-203ENST00000565038 SIX6O95475 246 aa0.86□□□□□ -2.27
PALB2-203ENST00000565038 C1QBP02746 253 aa0.86□□□□□ -2.27
PALB2-203ENST00000565038 BAALC-AS2P0C853 105 aa0.86□□□□□ -2.27
PALB2-203ENST00000565038 SNCAP37840 140 aa0.86□□□□□ -2.27
PALB2-203ENST00000565038 RRAS2P62070 204 aaPredicted RBP0.86□□□□□ -2.27
PALB2-203ENST00000565038 RPL19P84098 196 aaKnown RBP0.86□□□□□ -2.27
PALB2-203ENST00000565038 PSG9Q00887 426 aa0.86□□□□□ -2.27
PALB2-203ENST00000565038 WFDC2Q14508 124 aa0.86□□□□□ -2.27
PALB2-203ENST00000565038 SPINK13Q1W4C9 94 aa0.86□□□□□ -2.27
PALB2-203ENST00000565038 UNQ6190/PRO20217Q6UXQ8 127 aa0.86□□□□□ -2.27
PALB2-203ENST00000565038 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa0.86□□□□□ -2.27
PALB2-203ENST00000565038 SOSTDC1Q6X4U4 206 aa0.86□□□□□ -2.27
PALB2-203ENST00000565038 VSTM2AQ8TAG5 236 aa0.86□□□□□ -2.27
PALB2-203ENST00000565038 SFT2D1Q8WV19 159 aa0.86□□□□□ -2.27
PALB2-203ENST00000565038 LSM10Q969L4 123 aaKnown RBP0.86□□□□□ -2.27
PALB2-203ENST00000565038 AGPAT4-IT1Q9H0P7 198 aa0.86□□□□□ -2.27
PALB2-203ENST00000565038 CYSTM1Q9H1C7 97 aa0.86□□□□□ -2.27
PALB2-203ENST00000565038 NAA60Q9H7X0 242 aa0.86□□□□□ -2.27
PALB2-203ENST00000565038 NOP10Q9NPE3 64 aaKnown RBP0.86□□□□□ -2.27
PALB2-203ENST00000565038 NHP2Q9NX24 153 aaKnown RBP0.86□□□□□ -2.27
PALB2-203ENST00000565038 FKBP11Q9NYL4 201 aa0.86□□□□□ -2.27
PALB2-203ENST00000565038 COPZ2Q9P299 210 aa0.86□□□□□ -2.27
PALB2-203ENST00000565038 PRNDQ9UKY0 176 aa0.86□□□□□ -2.27
PALB2-203ENST00000565038 PAIP2BQ9ULR5 123 aaKnown RBP0.86□□□□□ -2.27
PALB2-203ENST00000565038 MUC4Q99102 2169 aa0.86□□□□□ -2.27
PALB2-203ENST00000565038 TRBV19A0A075B6N1 114 aa0.85□□□□□ -2.27
PALB2-203ENST00000565038 IGKV2D-26A0A0A0MRZ7 120 aa0.85□□□□□ -2.27
PALB2-203ENST00000565038 TRAV12-3A0A0B4J271 114 aa0.85□□□□□ -2.27
PALB2-203ENST00000565038 NBDYA0A0U1RRE5 68 aa0.85□□□□□ -2.27
PALB2-203ENST00000565038 C9orf170A2RU37 121 aa0.85□□□□□ -2.27
PALB2-203ENST00000565038 NUPR2A6NF83 97 aa0.85□□□□□ -2.27
PALB2-203ENST00000565038 CCDC160A6NGH7 325 aa0.85□□□□□ -2.27
PALB2-203ENST00000565038 A8MTW9 85 aa0.85□□□□□ -2.27
PALB2-203ENST00000565038 SNRPGP15A8MWD9 76 aa0.85□□□□□ -2.27
PALB2-203ENST00000565038 GABARAPH6UMI1 98 aa0.85□□□□□ -2.27
PALB2-203ENST00000565038 M0R3E3 92 aa0.85□□□□□ -2.27
PALB2-203ENST00000565038 TAX1BP3O14907 124 aa0.85□□□□□ -2.27
PALB2-203ENST00000565038 HYPMO75409 117 aa0.85□□□□□ -2.27
PALB2-203ENST00000565038 NDUFC2O95298 119 aa0.85□□□□□ -2.27
PALB2-203ENST00000565038 SFT2D2O95562 160 aa0.85□□□□□ -2.27
PALB2-203ENST00000565038 DHFRP00374 187 aa0.85□□□□□ -2.27
PALB2-203ENST00000565038 IFNA21P01568 189 aa0.85□□□□□ -2.27
PALB2-203ENST00000565038 SPART-AS1P0CW21 52 aa0.85□□□□□ -2.27
PALB2-203ENST00000565038 PYYP10082 97 aa0.85□□□□□ -2.27
PALB2-203ENST00000565038 HLA-DRB4P13762 266 aa0.85□□□□□ -2.27
PALB2-203ENST00000565038 MIFP14174 115 aa0.85□□□□□ -2.27
PALB2-203ENST00000565038 RNASE4P34096 147 aaKnown RBP0.85□□□□□ -2.27
PALB2-203ENST00000565038 RAB4BP61018 213 aa0.85□□□□□ -2.27
PALB2-203ENST00000565038 GNG5P63218 68 aa0.85□□□□□ -2.27
PALB2-203ENST00000565038 CATR1Q13166 79 aa0.85□□□□□ -2.27
PALB2-203ENST00000565038 MSMO1Q15800 293 aa0.85□□□□□ -2.27
PALB2-203ENST00000565038 RRN3P1Q2M238 152 aa0.85□□□□□ -2.27
PALB2-203ENST00000565038 NMSQ5H8A3 153 aa0.85□□□□□ -2.27
PALB2-203ENST00000565038 MIC13Q5XKP0 118 aa0.85□□□□□ -2.27
PALB2-203ENST00000565038 LYPD5Q6UWN5 251 aa0.85□□□□□ -2.27
PALB2-203ENST00000565038 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP0.85□□□□□ -2.27
PALB2-203ENST00000565038 CYP2G1PQ6ZSU1 146 aa0.85□□□□□ -2.27
PALB2-203ENST00000565038 TMED4Q7Z7H5 227 aa0.85□□□□□ -2.27
PALB2-203ENST00000565038 OR8I2Q8N0Y5 310 aa0.85□□□□□ -2.27
PALB2-203ENST00000565038 EXOC3-AS1Q8N2X6 119 aa0.85□□□□□ -2.27
PALB2-203ENST00000565038 ZNF431Q8TF32 576 aaPredicted RBP0.85□□□□□ -2.27
PALB2-203ENST00000565038 AP3S1Q92572 193 aa0.85□□□□□ -2.27
PALB2-203ENST00000565038 HMCN1Q96RW7 5635 aa0.85□□□□□ -2.27
PALB2-203ENST00000565038 IMUPQ9GZP8 106 aa0.85□□□□□ -2.27
PALB2-203ENST00000565038 PSENENQ9NZ42 101 aa0.85□□□□□ -2.27
PALB2-203ENST00000565038 GSKIPQ9P0R6 139 aa0.85□□□□□ -2.27
PALB2-203ENST00000565038 SS18L2Q9UHA2 77 aa0.85□□□□□ -2.27
PALB2-203ENST00000565038 HLA-DRB4X5D2U9 266 aa0.85□□□□□ -2.27
PALB2-203ENST00000565038 DMBT1Q9UGM3 2413 aaPredicted RBP0.84□□□□□ -2.27
PALB2-203ENST00000565038 TRAV30A0A087WSZ9 112 aa0.84□□□□□ -2.27
PALB2-203ENST00000565038 TRAV2A0A0B4J234 112 aa0.84□□□□□ -2.27
PALB2-203ENST00000565038 CST7O76096 145 aa0.84□□□□□ -2.27
PALB2-203ENST00000565038 IL5P05113 134 aa0.84□□□□□ -2.27
PALB2-203ENST00000565038 SFTA3P0C7M3 94 aa0.84□□□□□ -2.27
PALB2-203ENST00000565038 AKAIN1P0CW23 69 aa0.84□□□□□ -2.27
PALB2-203ENST00000565038 SLC25A4P12235 298 aa0.84□□□□□ -2.27
PALB2-203ENST00000565038 RNASE3P12724 160 aaKnown RBP0.84□□□□□ -2.27
PALB2-203ENST00000565038 G0S2P27469 103 aa0.84□□□□□ -2.27
PALB2-203ENST00000565038 UBE2BP63146 152 aa0.84□□□□□ -2.27
PALB2-203ENST00000565038 HIST1H1AQ02539 215 aaPredicted RBP0.84□□□□□ -2.27
PALB2-203ENST00000565038 SMCO1Q147U7 214 aa0.84□□□□□ -2.27
PALB2-203ENST00000565038 Q5BKY6 102 aa0.84□□□□□ -2.27
PALB2-203ENST00000565038 C1orf134Q5TEV5 83 aa0.84□□□□□ -2.27
PALB2-203ENST00000565038 TEX261Q6UWH6 196 aa0.84□□□□□ -2.27
PALB2-203ENST00000565038 TMEM14EPQ6UXP3 125 aa0.84□□□□□ -2.27
PALB2-203ENST00000565038 FOXI2Q6ZQN5 318 aa0.84□□□□□ -2.27
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms