RNA–Protein interactions for RNA: ENST00000560754.1

RNF31-223, Transcript of ring finger protein 31, human

TSL 3

Gene RNF31, Length 606 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RNF31-223	ENST00000560754	HERVK_113	P63121	156 aa		8.09	□□□□□ -1.11
RNF31-223	ENST00000560754	PNRC1	Q12796	327 aa	Predicted RBP	8.09	□□□□□ -1.11
RNF31-223	ENST00000560754	LINC00469	Q8N7U9	141 aa		8.09	□□□□□ -1.11
RNF31-223	ENST00000560754	XAGE1A	Q9HD64	81 aa		8.09	□□□□□ -1.11
RNF31-223	ENST00000560754	TOMM7	Q9P0U1	55 aa		8.09	□□□□□ -1.11
RNF31-223	ENST00000560754	MUC2	Q02817	5179 aa		8.09	□□□□□ -1.11
RNF31-223	ENST00000560754		F8VRH5	84 aa		8.08	□□□□□ -1.12
RNF31-223	ENST00000560754	G0S2	P27469	103 aa		8.08	□□□□□ -1.12
RNF31-223	ENST00000560754	PRR4	Q16378	134 aa		8.08	□□□□□ -1.12
RNF31-223	ENST00000560754	PAPPA-AS1	Q5QFB9	102 aa		8.08	□□□□□ -1.12
RNF31-223	ENST00000560754	CTDSP1	Q9GZU7	261 aa		8.08	□□□□□ -1.12
RNF31-223	ENST00000560754	NXT2	Q9NPJ8	142 aa	Known RBP	8.08	□□□□□ -1.12
RNF31-223	ENST00000560754	TIMM17A	Q99595	171 aa		8.07	□□□□□ -1.12
RNF31-223	ENST00000560754	MRPL55	Q7Z7F7	128 aa	Known RBP	8.06	□□□□□ -1.12
RNF31-223	ENST00000560754	TOMM6	Q96B49	74 aa		8.06	□□□□□ -1.12
RNF31-223	ENST00000560754	ERAS	Q7Z444	233 aa		8.05	□□□□□ -1.12
RNF31-223	ENST00000560754	GEMIN7	Q9H840	131 aa	Known RBP	8.05	□□□□□ -1.12
RNF31-223	ENST00000560754		A0A087X002	238 aa		8.04	□□□□□ -1.12
RNF31-223	ENST00000560754	BCE1	O60756	84 aa		8.04	□□□□□ -1.12
RNF31-223	ENST00000560754	CXCL5	P42830	114 aa		8.04	□□□□□ -1.12
RNF31-223	ENST00000560754	RPL28	P46779	137 aa	Known RBP	8.04	□□□□□ -1.12
RNF31-223	ENST00000560754	LINC00167	Q96N53	147 aa		8.04	□□□□□ -1.12
RNF31-223	ENST00000560754	PDZD11	Q5EBL8	140 aa		8.03	□□□□□ -1.12
RNF31-223	ENST00000560754	IGLV5-45	A0A087WSX0	123 aa		8.02	□□□□□ -1.13
RNF31-223	ENST00000560754	TINCR	A0A1B0GVN0	87 aa		8.02	□□□□□ -1.13
RNF31-223	ENST00000560754	LINC01546	A6NGU7	62 aa		8.02	□□□□□ -1.13
RNF31-223	ENST00000560754	SMIM1	B2RUZ4	78 aa		8.02	□□□□□ -1.13
RNF31-223	ENST00000560754	TSPAN13	O95857	204 aa		8.02	□□□□□ -1.13
RNF31-223	ENST00000560754	CRYGA	P11844	174 aa		8.02	□□□□□ -1.13
RNF31-223	ENST00000560754	IGLV5-37	A0A075B6J1	123 aa		8.01	□□□□□ -1.13
RNF31-223	ENST00000560754	KRTAP13-1	Q8IUC0	172 aa		8.01	□□□□□ -1.13
RNF31-223	ENST00000560754	COX7B2	Q8TF08	81 aa		8.01	□□□□□ -1.13
RNF31-223	ENST00000560754	SCGB3A1	Q96QR1	104 aa		8.01	□□□□□ -1.13
RNF31-223	ENST00000560754	LINC01549	A6NIU2	74 aa		8	□□□□□ -1.13
RNF31-223	ENST00000560754	RPL37AP8	A6NKH3	93 aa		8	□□□□□ -1.13
RNF31-223	ENST00000560754	ADCYAP1	P18509	176 aa		8	□□□□□ -1.13
RNF31-223	ENST00000560754	KIAA1644	Q3SXP7	199 aa		8	□□□□□ -1.13
RNF31-223	ENST00000560754	TYMSOS	Q8TAI1	123 aa		8	□□□□□ -1.13
RNF31-223	ENST00000560754	CST9L	Q9H4G1	147 aa		7.99	□□□□□ -1.13
RNF31-223	ENST00000560754	KRTAP13-2	Q52LG2	175 aa		7.98	□□□□□ -1.13
RNF31-223	ENST00000560754	TRAV9-1	A0A075B6T8	112 aa		7.97	□□□□□ -1.13
RNF31-223	ENST00000560754	RAB5B	P61020	215 aa		7.97	□□□□□ -1.13
RNF31-223	ENST00000560754	RAB14	P61106	215 aa		7.97	□□□□□ -1.13
RNF31-223	ENST00000560754	ANAPC11	Q9NYG5	84 aa		7.97	□□□□□ -1.13
RNF31-223	ENST00000560754	FAM229B	Q4G0N7	80 aa		7.96	□□□□□ -1.14
RNF31-223	ENST00000560754	MRPL18	Q9H0U6	180 aa	Known RBP	7.96	□□□□□ -1.14
RNF31-223	ENST00000560754		A0A0U1RQV1	116 aa		7.95	□□□□□ -1.14
RNF31-223	ENST00000560754	GAGE10	A6NGK3	116 aa		7.95	□□□□□ -1.14
RNF31-223	ENST00000560754	PMVK	Q15126	192 aa		7.95	□□□□□ -1.14
RNF31-223	ENST00000560754	GNB1L	Q9BYB4	327 aa		7.95	□□□□□ -1.14
RNF31-223	ENST00000560754	SPINK8	P0C7L1	97 aa		7.94	□□□□□ -1.14
RNF31-223	ENST00000560754	CTAG1A	P78358	180 aa		7.94	□□□□□ -1.14
RNF31-223	ENST00000560754	IGLV5-39	A0A0G2JS06	123 aa		7.93	□□□□□ -1.14
RNF31-223	ENST00000560754	CLLU1	Q5K131	121 aa		7.93	□□□□□ -1.14
RNF31-223	ENST00000560754	LCE2A	Q5TA79	106 aa	Predicted RBP	7.93	□□□□□ -1.14
RNF31-223	ENST00000560754	NKAPP1	Q8N9T2	125 aa		7.93	□□□□□ -1.14
RNF31-223	ENST00000560754	UBE2A	P49459	152 aa		7.92	□□□□□ -1.14
RNF31-223	ENST00000560754	TMEM218	A2RU14	115 aa		7.91	□□□□□ -1.14
RNF31-223	ENST00000560754	ATP5L	O75964	103 aa		7.91	□□□□□ -1.14
RNF31-223	ENST00000560754	IGKV2-28	A0A075B6P5	120 aa		7.9	□□□□□ -1.14
RNF31-223	ENST00000560754		H3BRM9	83 aa		7.9	□□□□□ -1.14
RNF31-223	ENST00000560754	SCO1	O75880	301 aa		7.9	□□□□□ -1.14
RNF31-223	ENST00000560754	IGKV2D-28	P01615	120 aa		7.9	□□□□□ -1.14
RNF31-223	ENST00000560754	IGLC3	P0DOY3	106 aa		7.9	□□□□□ -1.14
RNF31-223	ENST00000560754	VPREB1	P12018	145 aa		7.9	□□□□□ -1.14
RNF31-223	ENST00000560754	COX17	Q14061	63 aa		7.9	□□□□□ -1.14
RNF31-223	ENST00000560754	COX19	Q49B96	90 aa		7.9	□□□□□ -1.14
RNF31-223	ENST00000560754	UQCC3	Q6UW78	93 aa		7.9	□□□□□ -1.14
RNF31-223	ENST00000560754	LINC00304	Q8N9R0	145 aa		7.9	□□□□□ -1.14
RNF31-223	ENST00000560754	PFN2	P35080	140 aa		7.89	□□□□□ -1.15
RNF31-223	ENST00000560754	SND1-IT1	Q9HBX3	110 aa		7.89	□□□□□ -1.15
RNF31-223	ENST00000560754	IGKV2D-26	A0A0A0MRZ7	120 aa		7.88	□□□□□ -1.15
RNF31-223	ENST00000560754	TPRXL	Q17RH7	258 aa		7.88	□□□□□ -1.15
RNF31-223	ENST00000560754	FA2H	Q7L5A8	372 aa		7.88	□□□□□ -1.15
RNF31-223	ENST00000560754	PLEKHB2	Q96CS7	222 aa		7.88	□□□□□ -1.15
RNF31-223	ENST00000560754	RETNLB	Q9BQ08	111 aa		7.88	□□□□□ -1.15
RNF31-223	ENST00000560754	SEC11C	Q9BY50	192 aa		7.88	□□□□□ -1.15
RNF31-223	ENST00000560754	KRTAP9-2	Q9BYQ4	174 aa		7.88	□□□□□ -1.15
RNF31-223	ENST00000560754	TMEM126A	Q9H061	195 aa		7.88	□□□□□ -1.15
RNF31-223	ENST00000560754		A0A096LNJ9	63 aa		7.87	□□□□□ -1.15
RNF31-223	ENST00000560754	S100P	P25815	95 aa		7.87	□□□□□ -1.15
RNF31-223	ENST00000560754	RPL24	P83731	157 aa	Known RBP	7.87	□□□□□ -1.15
RNF31-223	ENST00000560754	ERG28	Q9UKR5	140 aa		7.87	□□□□□ -1.15
RNF31-223	ENST00000560754	TMEM238	C9JI98	176 aa		7.86	□□□□□ -1.15
RNF31-223	ENST00000560754		M0R378	163 aa		7.86	□□□□□ -1.15
RNF31-223	ENST00000560754	ZNF22	P17026	224 aa	Predicted RBP	7.86	□□□□□ -1.15
RNF31-223	ENST00000560754	PRLH	P81277	87 aa		7.86	□□□□□ -1.15
RNF31-223	ENST00000560754	FABP9	Q0Z7S8	132 aa		7.86	□□□□□ -1.15
RNF31-223	ENST00000560754	SMCO4	Q9NRQ5	59 aa		7.86	□□□□□ -1.15
RNF31-223	ENST00000560754	IGLV7-46	A0A075B6I9	117 aa		7.85	□□□□□ -1.15
RNF31-223	ENST00000560754	FAM19A1	Q7Z5A9	133 aa		7.85	□□□□□ -1.15
RNF31-223	ENST00000560754		Q8NDZ9	215 aa		7.85	□□□□□ -1.15
RNF31-223	ENST00000560754	URB1-AS1	Q96HZ7	61 aa		7.85	□□□□□ -1.15
RNF31-223	ENST00000560754	LINC00614	P0C842	121 aa		7.84	□□□□□ -1.15
RNF31-223	ENST00000560754	NDUFA6	P56556	154 aa		7.83	□□□□□ -1.16
RNF31-223	ENST00000560754	C10orf91	Q5T1B1	145 aa		7.83	□□□□□ -1.16
RNF31-223	ENST00000560754	SFTA2	Q6UW10	78 aa		7.83	□□□□□ -1.16
RNF31-223	ENST00000560754	ZNF625	Q96I27	306 aa	Predicted RBP	7.83	□□□□□ -1.16
RNF31-223	ENST00000560754	CDIP1	Q9H305	208 aa		7.83	□□□□□ -1.16
RNF31-223	ENST00000560754	IFITM2	Q01629	132 aa		7.82	□□□□□ -1.16

Retrieved 100 of 20,778 RNA–protein pairs in 105.3 ms