RNA–Protein interactions for RNA: ENST00000558314.5

TPM1-211, Transcript of tropomyosin 1, humanhuman

TSL 1 (best)

Gene TPM1, Length 1,031 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-211ENST00000558314 C10orf91Q5T1B1 145 aa9.39□□□□□ -0.91
TPM1-211ENST00000558314 AMELXQ99217 191 aa9.39□□□□□ -0.91
TPM1-211ENST00000558314 TRAV9-1A0A075B6T8 112 aa9.38□□□□□ -0.91
TPM1-211ENST00000558314 LINC01561Q8N1V8 128 aa9.38□□□□□ -0.91
TPM1-211ENST00000558314 SVBPQ8N300 66 aa9.38□□□□□ -0.91
TPM1-211ENST00000558314 NXT2Q9NPJ8 142 aaKnown RBP9.38□□□□□ -0.91
TPM1-211ENST00000558314 IGIPA6NJ69 53 aa9.37□□□□□ -0.91
TPM1-211ENST00000558314 Q8IZM0 81 aa9.37□□□□□ -0.91
TPM1-211ENST00000558314 CDKN2A-AS1Q9UH64 79 aa9.37□□□□□ -0.91
TPM1-211ENST00000558314 SNAPINO95295 136 aa9.36□□□□□ -0.91
TPM1-211ENST00000558314 HERVK_113P63121 156 aa9.36□□□□□ -0.91
TPM1-211ENST00000558314 PAPPA-AS1Q5QFB9 102 aa9.36□□□□□ -0.91
TPM1-211ENST00000558314 C22orf24Q9Y442 160 aa9.36□□□□□ -0.91
TPM1-211ENST00000558314 IGLV1-50A0A075B6I6 118 aa9.35□□□□□ -0.91
TPM1-211ENST00000558314 SEC11AP67812 179 aa9.35□□□□□ -0.91
TPM1-211ENST00000558314 SCGB3A1Q96QR1 104 aa9.35□□□□□ -0.91
TPM1-211ENST00000558314 K7EMI3 77 aa9.34□□□□□ -0.91
TPM1-211ENST00000558314 APOC3P02656 99 aa9.34□□□□□ -0.91
TPM1-211ENST00000558314 RPS10P5Q9NQ39 176 aa9.34□□□□□ -0.91
TPM1-211ENST00000558314 F8VRH5 84 aa9.33□□□□□ -0.92
TPM1-211ENST00000558314 NPSP0C0P6 89 aa9.33□□□□□ -0.92
TPM1-211ENST00000558314 KRTAP1-4P0C5Y4 121 aa9.33□□□□□ -0.92
TPM1-211ENST00000558314 G0S2P27469 103 aa9.33□□□□□ -0.92
TPM1-211ENST00000558314 PRR4Q16378 134 aa9.33□□□□□ -0.92
TPM1-211ENST00000558314 LBHQ53QV2 105 aaPredicted RBP9.33□□□□□ -0.92
TPM1-211ENST00000558314 TOMM6Q96B49 74 aa9.33□□□□□ -0.92
TPM1-211ENST00000558314 TIMM17AQ99595 171 aa9.33□□□□□ -0.92
TPM1-211ENST00000558314 COX19Q49B96 90 aa9.32□□□□□ -0.92
TPM1-211ENST00000558314 ZNF861PO60384 105 aa9.31□□□□□ -0.92
TPM1-211ENST00000558314 RAB5BP61020 215 aa9.31□□□□□ -0.92
TPM1-211ENST00000558314 FAM19A3Q7Z5A8 133 aa9.31□□□□□ -0.92
TPM1-211ENST00000558314 GAGE10A6NGK3 116 aa9.3□□□□□ -0.92
TPM1-211ENST00000558314 RPL37AP8A6NKH3 93 aa9.3□□□□□ -0.92
TPM1-211ENST00000558314 SPINK8P0C7L1 97 aa9.3□□□□□ -0.92
TPM1-211ENST00000558314 RPL13AP40429 203 aaKnown RBP9.3□□□□□ -0.92
TPM1-211ENST00000558314 ERASQ7Z444 233 aa9.3□□□□□ -0.92
TPM1-211ENST00000558314 COX7B2Q8TF08 81 aa9.3□□□□□ -0.92
TPM1-211ENST00000558314 LPAP08519 4548 aa9.3□□□□□ -0.92
TPM1-211ENST00000558314 NUPR1O60356 82 aa9.29□□□□□ -0.92
TPM1-211ENST00000558314 TSPAN13O95857 204 aa9.29□□□□□ -0.92
TPM1-211ENST00000558314 CXCL5P42830 114 aa9.29□□□□□ -0.92
TPM1-211ENST00000558314 MRPL55Q7Z7F7 128 aaKnown RBP9.29□□□□□ -0.92
TPM1-211ENST00000558314 SMIM1B2RUZ4 78 aa9.28□□□□□ -0.92
TPM1-211ENST00000558314 TINCRA0A1B0GVN0 87 aa9.27□□□□□ -0.93
TPM1-211ENST00000558314 PDZD11Q5EBL8 140 aa9.27□□□□□ -0.93
TPM1-211ENST00000558314 FA2HQ7L5A8 372 aa9.27□□□□□ -0.93
TPM1-211ENST00000558314 RPL28P46779 137 aaKnown RBP9.26□□□□□ -0.93
TPM1-211ENST00000558314 NDUFA6P56556 154 aa9.26□□□□□ -0.93
TPM1-211ENST00000558314 LINC00167Q96N53 147 aa9.26□□□□□ -0.93
TPM1-211ENST00000558314 GNB1LQ9BYB4 327 aa9.26□□□□□ -0.93
TPM1-211ENST00000558314 SMCO4Q9NRQ5 59 aa9.26□□□□□ -0.93
TPM1-211ENST00000558314 BCE1O60756 84 aa9.25□□□□□ -0.93
TPM1-211ENST00000558314 SLC7A5P1Q8MH63 180 aa9.25□□□□□ -0.93
TPM1-211ENST00000558314 NKAPP1Q8N9T2 125 aa9.25□□□□□ -0.93
TPM1-211ENST00000558314 CST9LQ9H4G1 147 aa9.25□□□□□ -0.93
TPM1-211ENST00000558314 FABP9Q0Z7S8 132 aa9.24□□□□□ -0.93
TPM1-211ENST00000558314 TP73-AS1Q9UF72 201 aa9.24□□□□□ -0.93
TPM1-211ENST00000558314 UBE2AP49459 152 aa9.23□□□□□ -0.93
TPM1-211ENST00000558314 PMVKQ15126 192 aa9.23□□□□□ -0.93
TPM1-211ENST00000558314 MRPL18Q9H0U6 180 aaKnown RBP9.23□□□□□ -0.93
TPM1-211ENST00000558314 ANAPC11Q9NYG5 84 aa9.23□□□□□ -0.93
TPM1-211ENST00000558314 H3BRM9 83 aa9.22□□□□□ -0.93
TPM1-211ENST00000558314 SCO1O75880 301 aa9.22□□□□□ -0.93
TPM1-211ENST00000558314 ATP5LO75964 103 aa9.22□□□□□ -0.93
TPM1-211ENST00000558314 PFN2P35080 140 aa9.22□□□□□ -0.93
TPM1-211ENST00000558314 IGKV2-28A0A075B6P5 120 aa9.21□□□□□ -0.94
TPM1-211ENST00000558314 IGLV5-45A0A087WSX0 123 aa9.21□□□□□ -0.94
TPM1-211ENST00000558314 A0A087X002 238 aa9.21□□□□□ -0.94
TPM1-211ENST00000558314 IGKV2D-28P01615 120 aa9.21□□□□□ -0.94
TPM1-211ENST00000558314 TYMSOSQ8TAI1 123 aa9.21□□□□□ -0.94
TPM1-211ENST00000558314 LINC01549A6NIU2 74 aa9.2□□□□□ -0.94
TPM1-211ENST00000558314 CRYGAP11844 174 aa9.2□□□□□ -0.94
TPM1-211ENST00000558314 LINC01546A6NGU7 62 aa9.18□□□□□ -0.94
TPM1-211ENST00000558314 ZNF625Q96I27 306 aaPredicted RBP9.18□□□□□ -0.94
TPM1-211ENST00000558314 TRAPPC1Q9Y5R8 145 aa9.18□□□□□ -0.94
TPM1-211ENST00000558314 PMCHL1Q16048 86 aa9.16□□□□□ -0.94
TPM1-211ENST00000558314 IGLV5-37A0A075B6J1 123 aa9.15□□□□□ -0.94
TPM1-211ENST00000558314 PRLHP81277 87 aa9.15□□□□□ -0.94
TPM1-211ENST00000558314 FAM19A1Q7Z5A9 133 aa9.15□□□□□ -0.94
TPM1-211ENST00000558314 IGLC3P0DOY3 106 aa9.14□□□□□ -0.95
TPM1-211ENST00000558314 ZNF22P17026 224 aaPredicted RBP9.14□□□□□ -0.95
TPM1-211ENST00000558314 ERG28Q9UKR5 140 aa9.14□□□□□ -0.95
TPM1-211ENST00000558314 TMEM238C9JI98 176 aa9.13□□□□□ -0.95
TPM1-211ENST00000558314 TMEM170BQ5T4T1 132 aa9.13□□□□□ -0.95
TPM1-211ENST00000558314 CBLN2Q8IUK8 224 aa9.13□□□□□ -0.95
TPM1-211ENST00000558314 RETNLBQ9BQ08 111 aa9.13□□□□□ -0.95
TPM1-211ENST00000558314 SND1-IT1Q9HBX3 110 aa9.13□□□□□ -0.95
TPM1-211ENST00000558314 HBDP02042 147 aa9.12□□□□□ -0.95
TPM1-211ENST00000558314 YPEL4Q96NS1 127 aa9.12□□□□□ -0.95
TPM1-211ENST00000558314 A0A096LNJ9 63 aa9.11□□□□□ -0.95
TPM1-211ENST00000558314 IGLV5-39A0A0G2JS06 123 aa9.11□□□□□ -0.95
TPM1-211ENST00000558314 LINC00614P0C842 121 aa9.11□□□□□ -0.95
TPM1-211ENST00000558314 KRTAP13-2Q52LG2 175 aa9.11□□□□□ -0.95
TPM1-211ENST00000558314 BAGE3Q86Y29 109 aa9.11□□□□□ -0.95
TPM1-211ENST00000558314 C18orf32Q8TCD1 76 aa9.11□□□□□ -0.95
TPM1-211ENST00000558314 URB1-AS1Q96HZ7 61 aa9.11□□□□□ -0.95
TPM1-211ENST00000558314 IGKV2D-26A0A0A0MRZ7 120 aa9.1□□□□□ -0.95
TPM1-211ENST00000558314 A0A0U1RRA0 63 aa9.1□□□□□ -0.95
TPM1-211ENST00000558314 VPREB1P12018 145 aa9.1□□□□□ -0.95
TPM1-211ENST00000558314 RPL24P83731 157 aaKnown RBP9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms