RNA–Protein interactions for RNA: ENST00000558020.1

SNRPA1-204, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 3

Gene SNRPA1, Length 466 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-204ENST00000558020 KRTAP11-1Q8IUC1 163 aa8.24□□□□□ -1.09
SNRPA1-204ENST00000558020 Q8IZM0 81 aa8.24□□□□□ -1.09
SNRPA1-204ENST00000558020 C9orf129Q5T035 196 aaKnown RBP8.23□□□□□ -1.09
SNRPA1-204ENST00000558020 FAM19A3Q7Z5A8 133 aa8.23□□□□□ -1.09
SNRPA1-204ENST00000558020 COMMD7Q86VX2 200 aa8.23□□□□□ -1.09
SNRPA1-204ENST00000558020 ZC2HC1BQ5TFG8 222 aa8.22□□□□□ -1.09
SNRPA1-204ENST00000558020 LINC00173Q6ZV60 143 aa8.22□□□□□ -1.09
SNRPA1-204ENST00000558020 KRTAP7-1Q8IUC3 87 aa8.22□□□□□ -1.09
SNRPA1-204ENST00000558020 TMEM218A2RU14 115 aa8.21□□□□□ -1.1
SNRPA1-204ENST00000558020 LINC01549A6NIU2 74 aa8.21□□□□□ -1.1
SNRPA1-204ENST00000558020 F8VRH5 84 aa8.21□□□□□ -1.1
SNRPA1-204ENST00000558020 C4orf48Q5BLP8 95 aa8.21□□□□□ -1.1
SNRPA1-204ENST00000558020 TIMM17AQ99595 171 aa8.21□□□□□ -1.1
SNRPA1-204ENST00000558020 NUPR1O60356 82 aa8.2□□□□□ -1.1
SNRPA1-204ENST00000558020 ZNF861PO60384 105 aa8.2□□□□□ -1.1
SNRPA1-204ENST00000558020 CXCL5P42830 114 aa8.2□□□□□ -1.1
SNRPA1-204ENST00000558020 ERASQ7Z444 233 aa8.2□□□□□ -1.1
SNRPA1-204ENST00000558020 TOMM6Q96B49 74 aa8.2□□□□□ -1.1
SNRPA1-204ENST00000558020 CDKN2A-AS1Q9UH64 79 aa8.2□□□□□ -1.1
SNRPA1-204ENST00000558020 CARHSP1Q9Y2V2 147 aaKnown RBP8.2□□□□□ -1.1
SNRPA1-204ENST00000558020 C22orf24Q9Y442 160 aa8.2□□□□□ -1.1
SNRPA1-204ENST00000558020 LINC00469Q8N7U9 141 aa8.19□□□□□ -1.1
SNRPA1-204ENST00000558020 SCGB3A1Q96QR1 104 aa8.19□□□□□ -1.1
SNRPA1-204ENST00000558020 SEC11CQ9BY50 192 aa8.19□□□□□ -1.1
SNRPA1-204ENST00000558020 XAGE1AQ9HD64 81 aa8.19□□□□□ -1.1
SNRPA1-204ENST00000558020 KRTAP1-4P0C5Y4 121 aa8.18□□□□□ -1.1
SNRPA1-204ENST00000558020 TP73-AS1Q9UF72 201 aa8.18□□□□□ -1.1
SNRPA1-204ENST00000558020 TRAV9-1A0A075B6T8 112 aa8.17□□□□□ -1.1
SNRPA1-204ENST00000558020 ADCYAP1P18509 176 aa8.17□□□□□ -1.1
SNRPA1-204ENST00000558020 RPL28P46779 137 aaKnown RBP8.16□□□□□ -1.1
SNRPA1-204ENST00000558020 KIAA1644Q3SXP7 199 aa8.16□□□□□ -1.1
SNRPA1-204ENST00000558020 PDZD11Q5EBL8 140 aa8.16□□□□□ -1.1
SNRPA1-204ENST00000558020 MRPL55Q7Z7F7 128 aaKnown RBP8.16□□□□□ -1.1
SNRPA1-204ENST00000558020 TINCRA0A1B0GVN0 87 aa8.15□□□□□ -1.1
SNRPA1-204ENST00000558020 S100PP25815 95 aa8.15□□□□□ -1.1
SNRPA1-204ENST00000558020 PRR4Q16378 134 aa8.14□□□□□ -1.11
SNRPA1-204ENST00000558020 COX7B2Q8TF08 81 aa8.14□□□□□ -1.11
SNRPA1-204ENST00000558020 GNB1LQ9BYB4 327 aa8.14□□□□□ -1.11
SNRPA1-204ENST00000558020 SMIM1B2RUZ4 78 aa8.13□□□□□ -1.11
SNRPA1-204ENST00000558020 BCE1O60756 84 aa8.13□□□□□ -1.11
SNRPA1-204ENST00000558020 NDUFA5Q16718 116 aa8.13□□□□□ -1.11
SNRPA1-204ENST00000558020 COX19Q49B96 90 aa8.13□□□□□ -1.11
SNRPA1-204ENST00000558020 MRPL18Q9H0U6 180 aaKnown RBP8.13□□□□□ -1.11
SNRPA1-204ENST00000558020 CST9LQ9H4G1 147 aa8.13□□□□□ -1.11
SNRPA1-204ENST00000558020 H3BRM9 83 aa8.12□□□□□ -1.11
SNRPA1-204ENST00000558020 SMCO4Q9NRQ5 59 aa8.12□□□□□ -1.11
SNRPA1-204ENST00000558020 IGLV5-45A0A087WSX0 123 aa8.11□□□□□ -1.11
SNRPA1-204ENST00000558020 LINC01546A6NGU7 62 aa8.11□□□□□ -1.11
SNRPA1-204ENST00000558020 PMVKQ15126 192 aa8.11□□□□□ -1.11
SNRPA1-204ENST00000558020 C10orf91Q5T1B1 145 aa8.11□□□□□ -1.11
SNRPA1-204ENST00000558020 FA2HQ7L5A8 372 aa8.11□□□□□ -1.11
SNRPA1-204ENST00000558020 NKAPP1Q8N9T2 125 aa8.11□□□□□ -1.11
SNRPA1-204ENST00000558020 LINC00167Q96N53 147 aa8.11□□□□□ -1.11
SNRPA1-204ENST00000558020 RPL37AP8A6NKH3 93 aa8.1□□□□□ -1.11
SNRPA1-204ENST00000558020 ATP5LO75964 103 aa8.1□□□□□ -1.11
SNRPA1-204ENST00000558020 CRYGAP11844 174 aa8.1□□□□□ -1.11
SNRPA1-204ENST00000558020 RAB5BP61020 215 aa8.1□□□□□ -1.11
SNRPA1-204ENST00000558020 RHEBQ15382 184 aa8.1□□□□□ -1.11
SNRPA1-204ENST00000558020 RPS10P5Q9NQ39 176 aa8.09□□□□□ -1.11
SNRPA1-204ENST00000558020 APOC3P02656 99 aa8.08□□□□□ -1.12
SNRPA1-204ENST00000558020 SPINK8P0C7L1 97 aa8.08□□□□□ -1.12
SNRPA1-204ENST00000558020 FABP9Q0Z7S8 132 aa8.08□□□□□ -1.12
SNRPA1-204ENST00000558020 TYMSOSQ8TAI1 123 aa8.08□□□□□ -1.12
SNRPA1-204ENST00000558020 IGLV5-37A0A075B6J1 123 aa8.07□□□□□ -1.12
SNRPA1-204ENST00000558020 GAGE10A6NGK3 116 aa8.07□□□□□ -1.12
SNRPA1-204ENST00000558020 SNAPINO95295 136 aa8.07□□□□□ -1.12
SNRPA1-204ENST00000558020 TSPAN13O95857 204 aa8.07□□□□□ -1.12
SNRPA1-204ENST00000558020 UBE2AP49459 152 aa8.07□□□□□ -1.12
SNRPA1-204ENST00000558020 SVBPQ8N300 66 aa8.07□□□□□ -1.12
SNRPA1-204ENST00000558020 LPAP08519 4548 aa8.07□□□□□ -1.12
SNRPA1-204ENST00000558020 NDUFA6P56556 154 aa8.06□□□□□ -1.12
SNRPA1-204ENST00000558020 PFN2P35080 140 aa8.04□□□□□ -1.12
SNRPA1-204ENST00000558020 RPL24P83731 157 aaKnown RBP8.04□□□□□ -1.12
SNRPA1-204ENST00000558020 COX17Q14061 63 aa8.04□□□□□ -1.12
SNRPA1-204ENST00000558020 A0A087X002 238 aa8.03□□□□□ -1.12
SNRPA1-204ENST00000558020 FAM229BQ4G0N7 80 aa8.03□□□□□ -1.12
SNRPA1-204ENST00000558020 SFTA2Q6UW10 78 aa8.03□□□□□ -1.12
SNRPA1-204ENST00000558020 A0A0U1RQV1 116 aa8.02□□□□□ -1.13
SNRPA1-204ENST00000558020 LINC00614P0C842 121 aa8.02□□□□□ -1.13
SNRPA1-204ENST00000558020 IGLC3P0DOY3 106 aa8.02□□□□□ -1.13
SNRPA1-204ENST00000558020 IGKV2-28A0A075B6P5 120 aa8.01□□□□□ -1.13
SNRPA1-204ENST00000558020 IGLV5-39A0A0G2JS06 123 aa8.01□□□□□ -1.13
SNRPA1-204ENST00000558020 IGKV2D-28P01615 120 aa8.01□□□□□ -1.13
SNRPA1-204ENST00000558020 ERG28Q9UKR5 140 aa8.01□□□□□ -1.13
SNRPA1-204ENST00000558020 IGKV2D-26A0A0A0MRZ7 120 aa8□□□□□ -1.13
SNRPA1-204ENST00000558020 HBDP02042 147 aa8□□□□□ -1.13
SNRPA1-204ENST00000558020 KRTAP13-1Q8IUC0 172 aa8□□□□□ -1.13
SNRPA1-204ENST00000558020 SND1-IT1Q9HBX3 110 aa8□□□□□ -1.13
SNRPA1-204ENST00000558020 ANAPC11Q9NYG5 84 aa7.99□□□□□ -1.13
SNRPA1-204ENST00000558020 TRAPPC1Q9Y5R8 145 aa7.99□□□□□ -1.13
SNRPA1-204ENST00000558020 ZNF22P17026 224 aaPredicted RBP7.98□□□□□ -1.13
SNRPA1-204ENST00000558020 CTAG1AP78358 180 aa7.98□□□□□ -1.13
SNRPA1-204ENST00000558020 TMEM170BQ5T4T1 132 aa7.98□□□□□ -1.13
SNRPA1-204ENST00000558020 FAM19A1Q7Z5A9 133 aa7.98□□□□□ -1.13
SNRPA1-204ENST00000558020 BAGE3Q86Y29 109 aa7.98□□□□□ -1.13
SNRPA1-204ENST00000558020 SLC7A5P1Q8MH63 180 aa7.98□□□□□ -1.13
SNRPA1-204ENST00000558020 VPREB1P12018 145 aa7.97□□□□□ -1.13
SNRPA1-204ENST00000558020 LINC00304Q8N9R0 145 aa7.97□□□□□ -1.13
SNRPA1-204ENST00000558020 C18orf32Q8TCD1 76 aa7.97□□□□□ -1.13
SNRPA1-204ENST00000558020 TMEM126AQ9H061 195 aa7.97□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms