RNA–Protein interactions for RNA: ENST00000557262.5

TUBB3-213, Transcript of tubulin beta 3 class III, humanhuman

TSL 1 (best)

Gene TUBB3, Length 888 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-213ENST00000557262 LINC00469Q8N7U9 141 aa9.54□□□□□ -0.88
TUBB3-213ENST00000557262 CDKN2A-AS1Q9UH64 79 aa9.54□□□□□ -0.88
TUBB3-213ENST00000557262 C22orf24Q9Y442 160 aa9.54□□□□□ -0.88
TUBB3-213ENST00000557262 LBHQ53QV2 105 aaPredicted RBP9.53□□□□□ -0.88
TUBB3-213ENST00000557262 TIMM17AQ99595 171 aa9.53□□□□□ -0.88
TUBB3-213ENST00000557262 GEMIN7Q9H840 131 aaKnown RBP9.53□□□□□ -0.88
TUBB3-213ENST00000557262 ZNF861PO60384 105 aa9.52□□□□□ -0.89
TUBB3-213ENST00000557262 RPL13AP40429 203 aaKnown RBP9.52□□□□□ -0.89
TUBB3-213ENST00000557262 TOMM6Q96B49 74 aa9.52□□□□□ -0.89
TUBB3-213ENST00000557262 XAGE1AQ9HD64 81 aa9.52□□□□□ -0.89
TUBB3-213ENST00000557262 CARHSP1Q9Y2V2 147 aaKnown RBP9.52□□□□□ -0.89
TUBB3-213ENST00000557262 F8VRH5 84 aa9.51□□□□□ -0.89
TUBB3-213ENST00000557262 NUPR1O60356 82 aa9.51□□□□□ -0.89
TUBB3-213ENST00000557262 KIAA1644Q3SXP7 199 aa9.5□□□□□ -0.89
TUBB3-213ENST00000557262 ERASQ7Z444 233 aa9.5□□□□□ -0.89
TUBB3-213ENST00000557262 CXCL5P42830 114 aa9.49□□□□□ -0.89
TUBB3-213ENST00000557262 SCGB3A1Q96QR1 104 aa9.49□□□□□ -0.89
TUBB3-213ENST00000557262 TP73-AS1Q9UF72 201 aa9.48□□□□□ -0.89
TUBB3-213ENST00000557262 MRPL55Q7Z7F7 128 aaKnown RBP9.47□□□□□ -0.89
TUBB3-213ENST00000557262 TINCRA0A1B0GVN0 87 aa9.46□□□□□ -0.9
TUBB3-213ENST00000557262 LINC01549A6NIU2 74 aa9.46□□□□□ -0.9
TUBB3-213ENST00000557262 PDZD11Q5EBL8 140 aa9.46□□□□□ -0.9
TUBB3-213ENST00000557262 TRAV9-1A0A075B6T8 112 aa9.45□□□□□ -0.9
TUBB3-213ENST00000557262 SMIM1B2RUZ4 78 aa9.45□□□□□ -0.9
TUBB3-213ENST00000557262 ADCYAP1P18509 176 aa9.45□□□□□ -0.9
TUBB3-213ENST00000557262 PRR4Q16378 134 aa9.45□□□□□ -0.9
TUBB3-213ENST00000557262 CLLU1Q5K131 121 aa9.45□□□□□ -0.9
TUBB3-213ENST00000557262 COX7B2Q8TF08 81 aa9.45□□□□□ -0.9
TUBB3-213ENST00000557262 RPL28P46779 137 aaKnown RBP9.44□□□□□ -0.9
TUBB3-213ENST00000557262 CST9LQ9H4G1 147 aa9.44□□□□□ -0.9
TUBB3-213ENST00000557262 IGLV5-45A0A087WSX0 123 aa9.43□□□□□ -0.9
TUBB3-213ENST00000557262 LINC01546A6NGU7 62 aa9.43□□□□□ -0.9
TUBB3-213ENST00000557262 BCE1O60756 84 aa9.43□□□□□ -0.9
TUBB3-213ENST00000557262 LINC00167Q96N53 147 aa9.43□□□□□ -0.9
TUBB3-213ENST00000557262 GNB1LQ9BYB4 327 aa9.43□□□□□ -0.9
TUBB3-213ENST00000557262 UQCC3Q6UW78 93 aa9.42□□□□□ -0.9
TUBB3-213ENST00000557262 TMEM218A2RU14 115 aa9.41□□□□□ -0.9
TUBB3-213ENST00000557262 RPL37AP8A6NKH3 93 aa9.41□□□□□ -0.9
TUBB3-213ENST00000557262 RAB5BP61020 215 aa9.41□□□□□ -0.9
TUBB3-213ENST00000557262 PMVKQ15126 192 aa9.41□□□□□ -0.9
TUBB3-213ENST00000557262 SPINK8P0C7L1 97 aa9.4□□□□□ -0.9
TUBB3-213ENST00000557262 S100PP25815 95 aa9.4□□□□□ -0.9
TUBB3-213ENST00000557262 MRPL18Q9H0U6 180 aaKnown RBP9.4□□□□□ -0.9
TUBB3-213ENST00000557262 TSPAN13O95857 204 aa9.39□□□□□ -0.91
TUBB3-213ENST00000557262 CRYGAP11844 174 aa9.39□□□□□ -0.91
TUBB3-213ENST00000557262 COX19Q49B96 90 aa9.39□□□□□ -0.91
TUBB3-213ENST00000557262 IGLV5-37A0A075B6J1 123 aa9.38□□□□□ -0.91
TUBB3-213ENST00000557262 A0A087X002 238 aa9.38□□□□□ -0.91
TUBB3-213ENST00000557262 GAGE10A6NGK3 116 aa9.38□□□□□ -0.91
TUBB3-213ENST00000557262 FA2HQ7L5A8 372 aa9.38□□□□□ -0.91
TUBB3-213ENST00000557262 H3BRM9 83 aa9.37□□□□□ -0.91
TUBB3-213ENST00000557262 NKAPP1Q8N9T2 125 aa9.37□□□□□ -0.91
TUBB3-213ENST00000557262 TYMSOSQ8TAI1 123 aa9.37□□□□□ -0.91
TUBB3-213ENST00000557262 SEC11CQ9BY50 192 aa9.37□□□□□ -0.91
TUBB3-213ENST00000557262 SMCO4Q9NRQ5 59 aa9.37□□□□□ -0.91
TUBB3-213ENST00000557262 ATP5LO75964 103 aa9.36□□□□□ -0.91
TUBB3-213ENST00000557262 FABP9Q0Z7S8 132 aa9.36□□□□□ -0.91
TUBB3-213ENST00000557262 UBE2AP49459 152 aa9.34□□□□□ -0.91
TUBB3-213ENST00000557262 ANAPC11Q9NYG5 84 aa9.34□□□□□ -0.91
TUBB3-213ENST00000557262 IGLC3P0DOY3 106 aa9.33□□□□□ -0.92
TUBB3-213ENST00000557262 PFN2P35080 140 aa9.33□□□□□ -0.92
TUBB3-213ENST00000557262 KRTAP13-1Q8IUC0 172 aa9.33□□□□□ -0.92
TUBB3-213ENST00000557262 IGLV5-39A0A0G2JS06 123 aa9.32□□□□□ -0.92
TUBB3-213ENST00000557262 NDUFA6P56556 154 aa9.32□□□□□ -0.92
TUBB3-213ENST00000557262 IFITM2Q01629 132 aa9.32□□□□□ -0.92
TUBB3-213ENST00000557262 MUC2Q02817 5179 aa9.32□□□□□ -0.92
TUBB3-213ENST00000557262 IGKV2-28A0A075B6P5 120 aa9.31□□□□□ -0.92
TUBB3-213ENST00000557262 IGKV2D-28P01615 120 aa9.31□□□□□ -0.92
TUBB3-213ENST00000557262 SCO1O75880 301 aa9.3□□□□□ -0.92
TUBB3-213ENST00000557262 FAM229BQ4G0N7 80 aa9.3□□□□□ -0.92
TUBB3-213ENST00000557262 KRTAP13-2Q52LG2 175 aa9.3□□□□□ -0.92
TUBB3-213ENST00000557262 A0A096LNJ9 63 aa9.29□□□□□ -0.92
TUBB3-213ENST00000557262 LINC00614P0C842 121 aa9.29□□□□□ -0.92
TUBB3-213ENST00000557262 ZNF22P17026 224 aaPredicted RBP9.29□□□□□ -0.92
TUBB3-213ENST00000557262 COX17Q14061 63 aa9.29□□□□□ -0.92
TUBB3-213ENST00000557262 SND1-IT1Q9HBX3 110 aa9.29□□□□□ -0.92
TUBB3-213ENST00000557262 RPS10P5Q9NQ39 176 aa9.29□□□□□ -0.92
TUBB3-213ENST00000557262 ERG28Q9UKR5 140 aa9.29□□□□□ -0.92
TUBB3-213ENST00000557262 VPREB1P12018 145 aa9.28□□□□□ -0.92
TUBB3-213ENST00000557262 RPL24P83731 157 aaKnown RBP9.28□□□□□ -0.92
TUBB3-213ENST00000557262 C10orf91Q5T1B1 145 aa9.28□□□□□ -0.92
TUBB3-213ENST00000557262 URB1-AS1Q96HZ7 61 aa9.28□□□□□ -0.92
TUBB3-213ENST00000557262 RHEBQ15382 184 aa9.27□□□□□ -0.93
TUBB3-213ENST00000557262 C18orf32Q8TCD1 76 aa9.27□□□□□ -0.93
TUBB3-213ENST00000557262 TRAPPC1Q9Y5R8 145 aa9.27□□□□□ -0.93
TUBB3-213ENST00000557262 HBDP02042 147 aa9.26□□□□□ -0.93
TUBB3-213ENST00000557262 PRLHP81277 87 aa9.26□□□□□ -0.93
TUBB3-213ENST00000557262 FAM19A1Q7Z5A9 133 aa9.26□□□□□ -0.93
TUBB3-213ENST00000557262 COMMD7Q86VX2 200 aa9.26□□□□□ -0.93
TUBB3-213ENST00000557262 ZNF625Q96I27 306 aaPredicted RBP9.26□□□□□ -0.93
TUBB3-213ENST00000557262 TMEM126AQ9H061 195 aa9.26□□□□□ -0.93
TUBB3-213ENST00000557262 IGKV2D-26A0A0A0MRZ7 120 aa9.25□□□□□ -0.93
TUBB3-213ENST00000557262 BAGE3Q86Y29 109 aa9.25□□□□□ -0.93
TUBB3-213ENST00000557262 LINC00304Q8N9R0 145 aa9.25□□□□□ -0.93
TUBB3-213ENST00000557262 A0A0U1RQV1 116 aa9.24□□□□□ -0.93
TUBB3-213ENST00000557262 TMEM238C9JI98 176 aa9.24□□□□□ -0.93
TUBB3-213ENST00000557262 PMCHL1Q16048 86 aa9.24□□□□□ -0.93
TUBB3-213ENST00000557262 TMEM170BQ5T4T1 132 aa9.24□□□□□ -0.93
TUBB3-213ENST00000557262 SFTA2Q6UW10 78 aa9.24□□□□□ -0.93
TUBB3-213ENST00000557262 C11orf86A6NJI1 115 aa9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 66.6 ms