RNA–Protein interactions for RNA: ENST00000557258.5

FOXN3-214, Transcript of forkhead box N3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene FOXN3, Length 2,692 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-214ENST00000557258 C6orf226Q5I0X4 101 aa13.3□□□□□ -0.28
FOXN3-214ENST00000557258 TRBV10-2A0A0K0K1G8 114 aa13.28□□□□□ -0.28
FOXN3-214ENST00000557258 LINC00337Q8N6G1 96 aa13.28□□□□□ -0.28
FOXN3-214ENST00000557258 SND1-IT1Q9HBX3 110 aa13.28□□□□□ -0.28
FOXN3-214ENST00000557258 LST1O00453 97 aa13.27□□□□□ -0.28
FOXN3-214ENST00000557258 SS18Q15532 418 aa13.27□□□□□ -0.28
FOXN3-214ENST00000557258 RNF183Q96D59 192 aa13.27□□□□□ -0.28
FOXN3-214ENST00000557258 MT-ATP8P03928 68 aa13.27□□□□□ -0.29
FOXN3-214ENST00000557258 ATP5G1P05496 136 aa13.26□□□□□ -0.29
FOXN3-214ENST00000557258 IGKV2-28A0A075B6P5 120 aa13.26□□□□□ -0.29
FOXN3-214ENST00000557258 IGKV2D-28P01615 120 aa13.26□□□□□ -0.29
FOXN3-214ENST00000557258 XGP55808 180 aa13.26□□□□□ -0.29
FOXN3-214ENST00000557258 LINC00526Q96FQ7 95 aa13.26□□□□□ -0.29
FOXN3-214ENST00000557258 SCGB1A1P11684 91 aa13.26□□□□□ -0.29
FOXN3-214ENST00000557258 CCL18P55774 89 aa13.26□□□□□ -0.29
FOXN3-214ENST00000557258 FAM218AQ96MZ4 157 aa13.25□□□□□ -0.29
FOXN3-214ENST00000557258 A0A1B0GUV1 79 aa13.24□□□□□ -0.29
FOXN3-214ENST00000557258 KRTAP10-11P60412 298 aa13.24□□□□□ -0.29
FOXN3-214ENST00000557258 C9orf116Q5BN46 136 aaPredicted RBP13.24□□□□□ -0.29
FOXN3-214ENST00000557258 NBEAL1Q6ZS30 2694 aa13.23□□□□□ -0.29
FOXN3-214ENST00000557258 SPART-AS1P0CW21 52 aa13.23□□□□□ -0.29
FOXN3-214ENST00000557258 REG3AQ06141 175 aa13.23□□□□□ -0.29
FOXN3-214ENST00000557258 CHCHD10Q8WYQ3 142 aaPredicted RBP13.23□□□□□ -0.29
FOXN3-214ENST00000557258 WFDC9Q8NEX5 89 aa13.23□□□□□ -0.29
FOXN3-214ENST00000557258 CRPP02741 224 aa13.22□□□□□ -0.29
FOXN3-214ENST00000557258 MIFP14174 115 aa13.22□□□□□ -0.29
FOXN3-214ENST00000557258 PRR3P79522 188 aaKnown RBP13.22□□□□□ -0.29
FOXN3-214ENST00000557258 A0A1B0GV72 72 aa13.22□□□□□ -0.29
FOXN3-214ENST00000557258 SHISA2Q6UWI4 295 aa13.22□□□□□ -0.29
FOXN3-214ENST00000557258 COPS9Q8WXC6 57 aa13.21□□□□□ -0.29
FOXN3-214ENST00000557258 UBE2WQ96B02 151 aa13.21□□□□□ -0.29
FOXN3-214ENST00000557258 Q9HAA7 133 aa13.21□□□□□ -0.29
FOXN3-214ENST00000557258 COX7A2LO14548 114 aa13.21□□□□□ -0.3
FOXN3-214ENST00000557258 TRAV8-4A0A0B4J246 113 aa13.2□□□□□ -0.3
FOXN3-214ENST00000557258 OR13C6PQ8NH95 151 aa13.2□□□□□ -0.3
FOXN3-214ENST00000557258 KRTAP24-1Q3LI83 254 aa13.19□□□□□ -0.3
FOXN3-214ENST00000557258 MALP21145 153 aa13.19□□□□□ -0.3
FOXN3-214ENST00000557258 CKS1BP61024 79 aa13.19□□□□□ -0.3
FOXN3-214ENST00000557258 CMYA5Q8N3K9 4069 aa13.18□□□□□ -0.3
FOXN3-214ENST00000557258 KLK12Q9UKR0 248 aa13.18□□□□□ -0.3
FOXN3-214ENST00000557258 IBA57-AS1B1ANH7 110 aa13.18□□□□□ -0.3
FOXN3-214ENST00000557258 C6orf223Q8N319 242 aa13.17□□□□□ -0.3
FOXN3-214ENST00000557258 SMIM11BQ8TCY0 68 aa13.17□□□□□ -0.3
FOXN3-214ENST00000557258 MRPL23Q16540 153 aaKnown RBP13.16□□□□□ -0.3
FOXN3-214ENST00000557258 CD164L2Q6UWJ8 174 aa13.15□□□□□ -0.3
FOXN3-214ENST00000557258 TRAV13-2A0A0B4J235 113 aa13.15□□□□□ -0.31
FOXN3-214ENST00000557258 A0A087WYN8 130 aa13.14□□□□□ -0.31
FOXN3-214ENST00000557258 H3BT86 120 aa13.14□□□□□ -0.31
FOXN3-214ENST00000557258 PRB2P02812 416 aaPredicted RBP13.14□□□□□ -0.31
FOXN3-214ENST00000557258 Q8IZM0 81 aa13.14□□□□□ -0.31
FOXN3-214ENST00000557258 M0QXV9 152 aa13.13□□□□□ -0.31
FOXN3-214ENST00000557258 CFAP161Q6P656 301 aa13.13□□□□□ -0.31
FOXN3-214ENST00000557258 KIAA0087Q14695 138 aa13.13□□□□□ -0.31
FOXN3-214ENST00000557258 C10orf25Q5T742 122 aa13.12□□□□□ -0.31
FOXN3-214ENST00000557258 Q6ZTC4 211 aa13.12□□□□□ -0.31
FOXN3-214ENST00000557258 C3orf56Q8N813 242 aa13.12□□□□□ -0.31
FOXN3-214ENST00000557258 BAALC-AS2P0C853 105 aa13.1□□□□□ -0.31
FOXN3-214ENST00000557258 LELP1Q5T871 98 aa13.1□□□□□ -0.31
FOXN3-214ENST00000557258 UNQ6190/PRO20217Q6UXQ8 127 aa13.09□□□□□ -0.31
FOXN3-214ENST00000557258 WFDC10BQ8IUB3 73 aa13.09□□□□□ -0.31
FOXN3-214ENST00000557258 WIPF1O43516 503 aa13.09□□□□□ -0.31
FOXN3-214ENST00000557258 RPL28P46779 137 aaKnown RBP13.09□□□□□ -0.31
FOXN3-214ENST00000557258 LYPD5Q6UWN5 251 aa13.09□□□□□ -0.31
FOXN3-214ENST00000557258 Q8NDZ9 215 aa13.09□□□□□ -0.31
FOXN3-214ENST00000557258 SLPIP03973 132 aa13.08□□□□□ -0.31
FOXN3-214ENST00000557258 MGAM2Q2M2H8 2515 aa13.08□□□□□ -0.32
FOXN3-214ENST00000557258 TTC32Q5I0X7 151 aa13.07□□□□□ -0.32
FOXN3-214ENST00000557258 ENHOQ6UWT2 76 aa13.07□□□□□ -0.32
FOXN3-214ENST00000557258 BAHCC1Q9P281 2608 aa13.07□□□□□ -0.32
FOXN3-214ENST00000557258 KPRPQ5T749 579 aaPredicted RBP13.06□□□□□ -0.32
FOXN3-214ENST00000557258 NCR3O14931 201 aa13.06□□□□□ -0.32
FOXN3-214ENST00000557258 C22orf24Q9Y442 160 aa13.06□□□□□ -0.32
FOXN3-214ENST00000557258 NANOS2P60321 138 aaKnown RBP13.06□□□□□ -0.32
FOXN3-214ENST00000557258 SPAG11BQ08648 103 aa13.06□□□□□ -0.32
FOXN3-214ENST00000557258 A0A0J9YWU9 116 aa13.05□□□□□ -0.32
FOXN3-214ENST00000557258 LECT2O14960 151 aa13.05□□□□□ -0.32
FOXN3-214ENST00000557258 C9orf129Q5T035 196 aaKnown RBP13.05□□□□□ -0.32
FOXN3-214ENST00000557258 C15orf53Q8NAA6 179 aa13.04□□□□□ -0.32
FOXN3-214ENST00000557258 SVIPQ8NHG7 77 aa13.04□□□□□ -0.32
FOXN3-214ENST00000557258 LINC01600Q96MT4 127 aa13.04□□□□□ -0.32
FOXN3-214ENST00000557258 TRACP01848 142 aa13.03□□□□□ -0.32
FOXN3-214ENST00000557258 CYSRT1A8MQ03 144 aa13.03□□□□□ -0.32
FOXN3-214ENST00000557258 DNAL4O96015 105 aa13.02□□□□□ -0.32
FOXN3-214ENST00000557258 HIGD2BQ4VC39 106 aa13.02□□□□□ -0.33
FOXN3-214ENST00000557258 SNCGO76070 127 aa13.01□□□□□ -0.33
FOXN3-214ENST00000557258 PPDPFQ9H3Y8 114 aa12.99□□□□□ -0.33
FOXN3-214ENST00000557258 PRR34Q9NV39 138 aa12.99□□□□□ -0.33
FOXN3-214ENST00000557258 XAGE1AQ9HD64 81 aa12.99□□□□□ -0.33
FOXN3-214ENST00000557258 ESRGQ1W209 222 aa12.97□□□□□ -0.33
FOXN3-214ENST00000557258 MRAPQ8TCY5 172 aa12.97□□□□□ -0.33
FOXN3-214ENST00000557258 CXCL5P42830 114 aa12.96□□□□□ -0.34
FOXN3-214ENST00000557258 LINC01561Q8N1V8 128 aa12.96□□□□□ -0.34
FOXN3-214ENST00000557258 EGFEM1PQ0D2K5 195 aa12.95□□□□□ -0.34
FOXN3-214ENST00000557258 C14orf132Q9NPU4 83 aa12.95□□□□□ -0.34
FOXN3-214ENST00000557258 GAGE2AQ6NT46 116 aa12.95□□□□□ -0.34
FOXN3-214ENST00000557258 DEFB121Q5J5C9 76 aa12.94□□□□□ -0.34
FOXN3-214ENST00000557258 KLK5Q9Y337 293 aaPredicted RBP12.94□□□□□ -0.34
FOXN3-214ENST00000557258 DEFB131BA0A096LNP1 70 aa12.94□□□□□ -0.34
FOXN3-214ENST00000557258 RPL18AQ02543 176 aaKnown RBP12.93□□□□□ -0.34
FOXN3-214ENST00000557258 LYSTQ99698 3801 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms