RNA–Protein interactions for RNA: ENST00000556994.5

SRP54-213, Transcript of signal recognition particle 54, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SRP54, Length 2,327 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-213ENST00000556994 GCN1Q92616 2671 aaKnown RBP7.94□□□□□ -1.14
SRP54-213ENST00000556994 LINC00959A0A1B0GUT2 108 aa7.94□□□□□ -1.14
SRP54-213ENST00000556994 H0YGX0 51 aa7.94□□□□□ -1.14
SRP54-213ENST00000556994 CXCL5P42830 114 aa7.94□□□□□ -1.14
SRP54-213ENST00000556994 PRR3P79522 188 aaKnown RBP7.94□□□□□ -1.14
SRP54-213ENST00000556994 TMEM126AQ9H061 195 aa7.94□□□□□ -1.14
SRP54-213ENST00000556994 LINC00846Q9NV44 126 aa7.94□□□□□ -1.14
SRP54-213ENST00000556994 C19orf73Q9NVV2 129 aa7.94□□□□□ -1.14
SRP54-213ENST00000556994 ACANP16112 2415 aa7.93□□□□□ -1.14
SRP54-213ENST00000556994 A0A096LPF7 62 aa7.93□□□□□ -1.14
SRP54-213ENST00000556994 OVOL2Q9BRP0 275 aa7.93□□□□□ -1.14
SRP54-213ENST00000556994 UQCRQO14949 82 aa7.92□□□□□ -1.14
SRP54-213ENST00000556994 KRTAP1-3Q8IUG1 177 aa7.92□□□□□ -1.14
SRP54-213ENST00000556994 BBC3Q96PG8 261 aaPredicted RBP7.92□□□□□ -1.14
SRP54-213ENST00000556994 A0A087WVE0 104 aa7.91□□□□□ -1.14
SRP54-213ENST00000556994 WFDC11Q8NEX6 87 aa7.91□□□□□ -1.14
SRP54-213ENST00000556994 LINC00526Q96FQ7 95 aa7.91□□□□□ -1.14
SRP54-213ENST00000556994 TMEM86BQ8N661 226 aa7.9□□□□□ -1.14
SRP54-213ENST00000556994 LINC01006Q8NI28 216 aa7.9□□□□□ -1.14
SRP54-213ENST00000556994 C2orf48Q96LS8 159 aa7.9□□□□□ -1.14
SRP54-213ENST00000556994 IGLV1-51P01701 117 aa7.9□□□□□ -1.15
SRP54-213ENST00000556994 GYPEP15421 78 aa7.9□□□□□ -1.15
SRP54-213ENST00000556994 COX7CP15954 63 aa7.9□□□□□ -1.15
SRP54-213ENST00000556994 OBSCN-AS1Q96MR7 158 aa7.9□□□□□ -1.15
SRP54-213ENST00000556994 HIST1H4AP62805 103 aaKnown RBP7.89□□□□□ -1.15
SRP54-213ENST00000556994 SS18Q15532 418 aa7.89□□□□□ -1.15
SRP54-213ENST00000556994 ORMDL1Q9P0S3 153 aa7.88□□□□□ -1.15
SRP54-213ENST00000556994 LOC107984640A0A0U1RRK4 108 aa7.87□□□□□ -1.15
SRP54-213ENST00000556994 hADV29S1A0JD25 119 aa7.87□□□□□ -1.15
SRP54-213ENST00000556994 CMC4P56277 68 aaPredicted RBP7.87□□□□□ -1.15
SRP54-213ENST00000556994 CYSTM1Q9H1C7 97 aa7.87□□□□□ -1.15
SRP54-213ENST00000556994 A0A1B0GX51 115 aa7.87□□□□□ -1.15
SRP54-213ENST00000556994 IGLV10-54A0A075B6I4 117 aa7.86□□□□□ -1.15
SRP54-213ENST00000556994 LY6G6DO95868 133 aa7.86□□□□□ -1.15
SRP54-213ENST00000556994 NANOS2P60321 138 aaKnown RBP7.86□□□□□ -1.15
SRP54-213ENST00000556994 C9orf116Q5BN46 136 aaPredicted RBP7.86□□□□□ -1.15
SRP54-213ENST00000556994 Q8N3U1 123 aa7.86□□□□□ -1.15
SRP54-213ENST00000556994 ATOX1O00244 68 aa7.86□□□□□ -1.15
SRP54-213ENST00000556994 RNASE1P07998 156 aaKnown RBP7.86□□□□□ -1.15
SRP54-213ENST00000556994 RPL18AQ02543 176 aaKnown RBP7.86□□□□□ -1.15
SRP54-213ENST00000556994 Q6JHZ5 121 aa7.86□□□□□ -1.15
SRP54-213ENST00000556994 LINC01561Q8N1V8 128 aa7.86□□□□□ -1.15
SRP54-213ENST00000556994 Q8IZM0 81 aa7.85□□□□□ -1.15
SRP54-213ENST00000556994 WFDC9Q8NEX5 89 aa7.85□□□□□ -1.15
SRP54-213ENST00000556994 LINC00269Q8N2A0 174 aa7.84□□□□□ -1.15
SRP54-213ENST00000556994 Q8N814 137 aa7.84□□□□□ -1.15
SRP54-213ENST00000556994 CCKP06307 115 aa7.84□□□□□ -1.15
SRP54-213ENST00000556994 ZNF843Q8N446 348 aa7.84□□□□□ -1.15
SRP54-213ENST00000556994 DEFB4AO15263 64 aa7.83□□□□□ -1.16
SRP54-213ENST00000556994 CRYGAP11844 174 aa7.83□□□□□ -1.16
SRP54-213ENST00000556994 HILS1P60008 231 aa7.83□□□□□ -1.16
SRP54-213ENST00000556994 Q8NDZ9 215 aa7.83□□□□□ -1.16
SRP54-213ENST00000556994 A0A1B0GUV1 79 aa7.83□□□□□ -1.16
SRP54-213ENST00000556994 KIAA0087Q14695 138 aa7.83□□□□□ -1.16
SRP54-213ENST00000556994 VWFP04275 2813 aa7.82□□□□□ -1.16
SRP54-213ENST00000556994 USP17L23D6RBM5 183 aa7.82□□□□□ -1.16
SRP54-213ENST00000556994 CFAP161Q6P656 301 aa7.82□□□□□ -1.16
SRP54-213ENST00000556994 KIR2DL5BQ8NHK3 375 aa7.82□□□□□ -1.16
SRP54-213ENST00000556994 ANK3Q12955 4377 aaKnown RBP7.82□□□□□ -1.16
SRP54-213ENST00000556994 TENM4Q6N022 2769 aa7.81□□□□□ -1.16
SRP54-213ENST00000556994 C6orf99Q4VX62 202 aa7.81□□□□□ -1.16
SRP54-213ENST00000556994 CHCHD10Q8WYQ3 142 aaPredicted RBP7.81□□□□□ -1.16
SRP54-213ENST00000556994 PRO0255Q9UI72 69 aa7.81□□□□□ -1.16
SRP54-213ENST00000556994 HELZ2Q9BYK8 2649 aaKnown RBP7.8□□□□□ -1.16
SRP54-213ENST00000556994 ANGP03950 147 aaKnown RBP7.8□□□□□ -1.16
SRP54-213ENST00000556994 LINC00167Q96N53 147 aa7.8□□□□□ -1.16
SRP54-213ENST00000556994 X6R8D5 127 aa7.8□□□□□ -1.16
SRP54-213ENST00000556994 SERP2Q8N6R1 65 aa7.8□□□□□ -1.16
SRP54-213ENST00000556994 TMEM256-PLSCR3K7ERE1 68 aa7.79□□□□□ -1.16
SRP54-213ENST00000556994 CD164L2Q6UWJ8 174 aa7.79□□□□□ -1.16
SRP54-213ENST00000556994 C6orf223Q8N319 242 aa7.79□□□□□ -1.16
SRP54-213ENST00000556994 LINC00612Q8N6U2 182 aa7.79□□□□□ -1.16
SRP54-213ENST00000556994 C16orf95Q9H693 158 aa7.79□□□□□ -1.16
SRP54-213ENST00000556994 JMJD7-PLA2G4BH0Y9G9 81 aa7.79□□□□□ -1.16
SRP54-213ENST00000556994 FAM19A1Q7Z5A9 133 aa7.79□□□□□ -1.16
SRP54-213ENST00000556994 LINC00482Q8N8I6 264 aa7.79□□□□□ -1.16
SRP54-213ENST00000556994 ITPR2Q14571 2701 aa7.78□□□□□ -1.16
SRP54-213ENST00000556994 REG3AQ06141 175 aa7.78□□□□□ -1.16
SRP54-213ENST00000556994 ENHOQ6UWT2 76 aa7.78□□□□□ -1.16
SRP54-213ENST00000556994 TRAV23DV6A0A075B6W5 121 aa7.78□□□□□ -1.16
SRP54-213ENST00000556994 KRTAP1-1Q07627 177 aa7.78□□□□□ -1.16
SRP54-213ENST00000556994 S100A7L2Q5SY68 101 aa7.78□□□□□ -1.16
SRP54-213ENST00000556994 C10orf25Q5T742 122 aa7.78□□□□□ -1.16
SRP54-213ENST00000556994 UPK3BQ9BT76 320 aa7.78□□□□□ -1.16
SRP54-213ENST00000556994 PDZD2O15018 2839 aa7.77□□□□□ -1.16
SRP54-213ENST00000556994 NDUFC2O95298 119 aa7.77□□□□□ -1.17
SRP54-213ENST00000556994 KRTAP10-3P60369 221 aa7.77□□□□□ -1.17
SRP54-213ENST00000556994 FASNP49327 2511 aaKnown RBP7.76□□□□□ -1.17
SRP54-213ENST00000556994 J3KT08 172 aa7.76□□□□□ -1.17
SRP54-213ENST00000556994 COX17Q14061 63 aa7.76□□□□□ -1.17
SRP54-213ENST00000556994 UNQ6190/PRO20217Q6UXQ8 127 aa7.76□□□□□ -1.17
SRP54-213ENST00000556994 SPATA3Q8NHX4 192 aa7.76□□□□□ -1.17
SRP54-213ENST00000556994 FAM19A5Q7Z5A7 132 aaPredicted RBP7.75□□□□□ -1.17
SRP54-213ENST00000556994 M0R2N4 97 aa7.75□□□□□ -1.17
SRP54-213ENST00000556994 DEFB135Q30KP9 77 aa7.75□□□□□ -1.17
SRP54-213ENST00000556994 IGHV4-28A0A0C4DH34 117 aa7.74□□□□□ -1.17
SRP54-213ENST00000556994 GHRHP01286 108 aa7.74□□□□□ -1.17
SRP54-213ENST00000556994 LINC00575Q6W349 94 aa7.74□□□□□ -1.17
SRP54-213ENST00000556994 HIVEP2P31629 2446 aa7.74□□□□□ -1.17
SRP54-213ENST00000556994 LAMTOR3Q9UHA4 124 aa7.74□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 100.3 ms