RNA–Protein interactions for RNA: ENST00000556846.1

PCNX1-213, Transcript of pecanex 1, humanhuman

TSL 3

Gene PCNX1, Length 506 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX1-213ENST00000556846 TOMM7Q9P0U1 55 aa4.42□□□□□ -1.7
PCNX1-213ENST00000556846 C6orf48Q9UBA6 75 aa4.42□□□□□ -1.7
PCNX1-213ENST00000556846 TRBV30A0A0K0K1B3 111 aa4.41□□□□□ -1.7
PCNX1-213ENST00000556846 K7EMI3 77 aa4.41□□□□□ -1.7
PCNX1-213ENST00000556846 IGLV7-43P04211 117 aa4.41□□□□□ -1.7
PCNX1-213ENST00000556846 TLX1NBP0CAT3 122 aa4.41□□□□□ -1.7
PCNX1-213ENST00000556846 UBE2D1P51668 147 aa4.41□□□□□ -1.7
PCNX1-213ENST00000556846 KRTAP10-8P60410 259 aa4.41□□□□□ -1.7
PCNX1-213ENST00000556846 ODF1Q14990 250 aa4.41□□□□□ -1.7
PCNX1-213ENST00000556846 PAPPA-AS1Q5QFB9 102 aa4.41□□□□□ -1.7
PCNX1-213ENST00000556846 ZC2HC1BQ5TFG8 222 aa4.41□□□□□ -1.7
PCNX1-213ENST00000556846 C2orf82Q6UX34 121 aa4.41□□□□□ -1.7
PCNX1-213ENST00000556846 NXT2Q9NPJ8 142 aaKnown RBP4.41□□□□□ -1.7
PCNX1-213ENST00000556846 SEC11AP67812 179 aa4.4□□□□□ -1.71
PCNX1-213ENST00000556846 KIAA0087Q14695 138 aa4.4□□□□□ -1.71
PCNX1-213ENST00000556846 LINC01561Q8N1V8 128 aa4.4□□□□□ -1.71
PCNX1-213ENST00000556846 DIRC1Q969H9 104 aa4.4□□□□□ -1.71
PCNX1-213ENST00000556846 ALKBH7Q9BT30 221 aaPredicted RBP4.4□□□□□ -1.71
PCNX1-213ENST00000556846 GEMIN7Q9H840 131 aaKnown RBP4.4□□□□□ -1.71
PCNX1-213ENST00000556846 IGIPA6NJ69 53 aa4.39□□□□□ -1.71
PCNX1-213ENST00000556846 NDUFC2-KCTD14E9PQ53 114 aa4.39□□□□□ -1.71
PCNX1-213ENST00000556846 M0QXV9 152 aa4.39□□□□□ -1.71
PCNX1-213ENST00000556846 NPSP0C0P6 89 aa4.39□□□□□ -1.71
PCNX1-213ENST00000556846 S100PP25815 95 aa4.39□□□□□ -1.71
PCNX1-213ENST00000556846 HERVK_113P63121 156 aa4.39□□□□□ -1.71
PCNX1-213ENST00000556846 KIAA1644Q3SXP7 199 aa4.39□□□□□ -1.71
PCNX1-213ENST00000556846 SCGB3A1Q96QR1 104 aa4.39□□□□□ -1.71
PCNX1-213ENST00000556846 AMELXQ99217 191 aa4.39□□□□□ -1.71
PCNX1-213ENST00000556846 LRP1Q07954 4544 aaKnown RBP4.39□□□□□ -1.71
PCNX1-213ENST00000556846 CLLU1Q5K131 121 aa4.38□□□□□ -1.71
PCNX1-213ENST00000556846 UQCC3Q6UW78 93 aa4.38□□□□□ -1.71
PCNX1-213ENST00000556846 LINC00173Q6ZV60 143 aa4.38□□□□□ -1.71
PCNX1-213ENST00000556846 LINC00469Q8N7U9 141 aa4.38□□□□□ -1.71
PCNX1-213ENST00000556846 TMEM218A2RU14 115 aa4.37□□□□□ -1.71
PCNX1-213ENST00000556846 LBHQ53QV2 105 aaPredicted RBP4.37□□□□□ -1.71
PCNX1-213ENST00000556846 C9orf129Q5T035 196 aaKnown RBP4.37□□□□□ -1.71
PCNX1-213ENST00000556846 ERASQ7Z444 233 aa4.37□□□□□ -1.71
PCNX1-213ENST00000556846 KRTAP11-1Q8IUC1 163 aa4.37□□□□□ -1.71
PCNX1-213ENST00000556846 Q8IZM0 81 aa4.37□□□□□ -1.71
PCNX1-213ENST00000556846 PRR26Q8N8Z3 221 aa4.37□□□□□ -1.71
PCNX1-213ENST00000556846 TOMM6Q96B49 74 aa4.37□□□□□ -1.71
PCNX1-213ENST00000556846 TIMM17AQ99595 171 aa4.37□□□□□ -1.71
PCNX1-213ENST00000556846 XAGE1AQ9HD64 81 aa4.37□□□□□ -1.71
PCNX1-213ENST00000556846 CDKN2A-AS1Q9UH64 79 aa4.37□□□□□ -1.71
PCNX1-213ENST00000556846 TRAV9-1A0A075B6T8 112 aa4.36□□□□□ -1.71
PCNX1-213ENST00000556846 F8VRH5 84 aa4.36□□□□□ -1.71
PCNX1-213ENST00000556846 H0Y9J4 135 aa4.36□□□□□ -1.71
PCNX1-213ENST00000556846 FAM19A3Q7Z5A8 133 aa4.36□□□□□ -1.71
PCNX1-213ENST00000556846 GNB1LQ9BYB4 327 aa4.36□□□□□ -1.71
PCNX1-213ENST00000556846 SMCO4Q9NRQ5 59 aa4.36□□□□□ -1.71
PCNX1-213ENST00000556846 LINC01549A6NIU2 74 aa4.35□□□□□ -1.71
PCNX1-213ENST00000556846 ADCYAP1P18509 176 aa4.35□□□□□ -1.71
PCNX1-213ENST00000556846 CXCL5P42830 114 aa4.35□□□□□ -1.71
PCNX1-213ENST00000556846 RAB5BP61020 215 aa4.35□□□□□ -1.71
PCNX1-213ENST00000556846 FABP9Q0Z7S8 132 aa4.35□□□□□ -1.71
PCNX1-213ENST00000556846 FA2HQ7L5A8 372 aa4.35□□□□□ -1.71
PCNX1-213ENST00000556846 KRTAP7-1Q8IUC3 87 aa4.35□□□□□ -1.71
PCNX1-213ENST00000556846 C22orf24Q9Y442 160 aa4.35□□□□□ -1.71
PCNX1-213ENST00000556846 IGLV1-50A0A075B6I6 118 aa4.34□□□□□ -1.71
PCNX1-213ENST00000556846 TINCRA0A1B0GVN0 87 aa4.34□□□□□ -1.71
PCNX1-213ENST00000556846 NDUFA6P56556 154 aa4.34□□□□□ -1.71
PCNX1-213ENST00000556846 COX19Q49B96 90 aa4.34□□□□□ -1.71
PCNX1-213ENST00000556846 PDZD11Q5EBL8 140 aa4.34□□□□□ -1.71
PCNX1-213ENST00000556846 COX7B2Q8TF08 81 aa4.34□□□□□ -1.71
PCNX1-213ENST00000556846 SEC11CQ9BY50 192 aa4.34□□□□□ -1.71
PCNX1-213ENST00000556846 CST9LQ9H4G1 147 aa4.34□□□□□ -1.71
PCNX1-213ENST00000556846 RPS10P5Q9NQ39 176 aa4.34□□□□□ -1.71
PCNX1-213ENST00000556846 HMCN2Q8NDA2 5059 aa4.34□□□□□ -1.72
PCNX1-213ENST00000556846 SMIM1B2RUZ4 78 aa4.33□□□□□ -1.72
PCNX1-213ENST00000556846 H3BRM9 83 aa4.33□□□□□ -1.72
PCNX1-213ENST00000556846 NUPR1O60356 82 aa4.33□□□□□ -1.72
PCNX1-213ENST00000556846 ZNF861PO60384 105 aa4.33□□□□□ -1.72
PCNX1-213ENST00000556846 SPINK8P0C7L1 97 aa4.33□□□□□ -1.72
PCNX1-213ENST00000556846 PMVKQ15126 192 aa4.33□□□□□ -1.72
PCNX1-213ENST00000556846 MRPL55Q7Z7F7 128 aaKnown RBP4.33□□□□□ -1.72
PCNX1-213ENST00000556846 COMMD7Q86VX2 200 aa4.33□□□□□ -1.72
PCNX1-213ENST00000556846 FAT3Q8TDW7 4589 aa4.33□□□□□ -1.72
PCNX1-213ENST00000556846 GAGE10A6NGK3 116 aa4.32□□□□□ -1.72
PCNX1-213ENST00000556846 ATP5LO75964 103 aa4.32□□□□□ -1.72
PCNX1-213ENST00000556846 RPL13AP40429 203 aaKnown RBP4.32□□□□□ -1.72
PCNX1-213ENST00000556846 RPL28P46779 137 aaKnown RBP4.32□□□□□ -1.72
PCNX1-213ENST00000556846 IFITM2Q01629 132 aa4.32□□□□□ -1.72
PCNX1-213ENST00000556846 LINC01546A6NGU7 62 aa4.31□□□□□ -1.72
PCNX1-213ENST00000556846 RPL37AP8A6NKH3 93 aa4.31□□□□□ -1.72
PCNX1-213ENST00000556846 PFN2P35080 140 aa4.31□□□□□ -1.72
PCNX1-213ENST00000556846 RHEBQ15382 184 aa4.31□□□□□ -1.72
PCNX1-213ENST00000556846 NKAPP1Q8N9T2 125 aa4.31□□□□□ -1.72
PCNX1-213ENST00000556846 TP73-AS1Q9UF72 201 aa4.31□□□□□ -1.72
PCNX1-213ENST00000556846 TRAPPC1Q9Y5R8 145 aa4.31□□□□□ -1.72
PCNX1-213ENST00000556846 UBR4Q5T4S7 5183 aa4.3□□□□□ -1.72
PCNX1-213ENST00000556846 IGLV5-45A0A087WSX0 123 aa4.3□□□□□ -1.72
PCNX1-213ENST00000556846 BCE1O60756 84 aa4.3□□□□□ -1.72
PCNX1-213ENST00000556846 KRTAP1-4P0C5Y4 121 aa4.3□□□□□ -1.72
PCNX1-213ENST00000556846 LINC00614P0C842 121 aa4.3□□□□□ -1.72
PCNX1-213ENST00000556846 PRR4Q16378 134 aa4.3□□□□□ -1.72
PCNX1-213ENST00000556846 LINC00167Q96N53 147 aa4.3□□□□□ -1.72
PCNX1-213ENST00000556846 CARHSP1Q9Y2V2 147 aaKnown RBP4.3□□□□□ -1.72
PCNX1-213ENST00000556846 TSPAN13O95857 204 aa4.29□□□□□ -1.72
PCNX1-213ENST00000556846 UBE2AP49459 152 aa4.29□□□□□ -1.72
PCNX1-213ENST00000556846 HBDP02042 147 aa4.28□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms