RNA–Protein interactions for RNA: ENST00000556648.1

TMEM260-211, Transcript of transmembrane protein 260, humanhuman

TSL 2

Gene TMEM260, Length 2,013 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-211ENST00000556648 MRPL23Q16540 153 aaKnown RBP6.92□□□□□ -1.3
TMEM260-211ENST00000556648 CHCHD10Q8WYQ3 142 aaPredicted RBP6.92□□□□□ -1.3
TMEM260-211ENST00000556648 FOXI1Q12951 378 aa6.91□□□□□ -1.3
TMEM260-211ENST00000556648 IGKV2-28A0A075B6P5 120 aa6.91□□□□□ -1.3
TMEM260-211ENST00000556648 IGKV2D-28P01615 120 aa6.91□□□□□ -1.3
TMEM260-211ENST00000556648 LELP1Q5T871 98 aa6.91□□□□□ -1.3
TMEM260-211ENST00000556648 TEN1Q86WV5 123 aa6.91□□□□□ -1.3
TMEM260-211ENST00000556648 CCL18P55774 89 aa6.9□□□□□ -1.3
TMEM260-211ENST00000556648 C6orf226Q5I0X4 101 aa6.9□□□□□ -1.3
TMEM260-211ENST00000556648 Q6ZTC4 211 aa6.9□□□□□ -1.3
TMEM260-211ENST00000556648 LINC00337Q8N6G1 96 aa6.9□□□□□ -1.3
TMEM260-211ENST00000556648 IBA57-AS1B1ANH7 110 aa6.89□□□□□ -1.31
TMEM260-211ENST00000556648 PCP4P48539 62 aa6.89□□□□□ -1.31
TMEM260-211ENST00000556648 CD164L2Q6UWJ8 174 aa6.89□□□□□ -1.31
TMEM260-211ENST00000556648 Q8IZM0 81 aa6.89□□□□□ -1.31
TMEM260-211ENST00000556648 COPS9Q8WXC6 57 aa6.89□□□□□ -1.31
TMEM260-211ENST00000556648 SND1-IT1Q9HBX3 110 aa6.89□□□□□ -1.31
TMEM260-211ENST00000556648 FLNBO75369 2602 aaKnown RBP6.89□□□□□ -1.31
TMEM260-211ENST00000556648 LST1O00453 97 aa6.89□□□□□ -1.31
TMEM260-211ENST00000556648 KIAA0087Q14695 138 aa6.89□□□□□ -1.31
TMEM260-211ENST00000556648 LYPD5Q6UWN5 251 aa6.89□□□□□ -1.31
TMEM260-211ENST00000556648 PPDPFLQ8WWR9 84 aa6.89□□□□□ -1.31
TMEM260-211ENST00000556648 DNAH3Q8TD57 4116 aa6.88□□□□□ -1.31
TMEM260-211ENST00000556648 COX7A2LO14548 114 aa6.88□□□□□ -1.31
TMEM260-211ENST00000556648 PRB2P02812 416 aaPredicted RBP6.88□□□□□ -1.31
TMEM260-211ENST00000556648 KLK12Q9UKR0 248 aa6.88□□□□□ -1.31
TMEM260-211ENST00000556648 A0A0J9YWU9 116 aa6.88□□□□□ -1.31
TMEM260-211ENST00000556648 TRBV10-2A0A0K0K1G8 114 aa6.88□□□□□ -1.31
TMEM260-211ENST00000556648 GAGE12HA6NDE8 117 aa6.88□□□□□ -1.31
TMEM260-211ENST00000556648 COX6CP09669 75 aa6.88□□□□□ -1.31
TMEM260-211ENST00000556648 PPDPFQ9H3Y8 114 aa6.88□□□□□ -1.31
TMEM260-211ENST00000556648 J3QR89 54 aa6.87□□□□□ -1.31
TMEM260-211ENST00000556648 NANOS2P60321 138 aaKnown RBP6.87□□□□□ -1.31
TMEM260-211ENST00000556648 KPRPQ5T749 579 aaPredicted RBP6.87□□□□□ -1.31
TMEM260-211ENST00000556648 ENHOQ6UWT2 76 aa6.87□□□□□ -1.31
TMEM260-211ENST00000556648 WFDC10BQ8IUB3 73 aa6.87□□□□□ -1.31
TMEM260-211ENST00000556648 LINC01561Q8N1V8 128 aa6.87□□□□□ -1.31
TMEM260-211ENST00000556648 NTN5Q8WTR8 489 aaPredicted RBP6.87□□□□□ -1.31
TMEM260-211ENST00000556648 CRPP02741 224 aa6.86□□□□□ -1.31
TMEM260-211ENST00000556648 C9orf116Q5BN46 136 aaPredicted RBP6.86□□□□□ -1.31
TMEM260-211ENST00000556648 LINC00526Q96FQ7 95 aa6.86□□□□□ -1.31
TMEM260-211ENST00000556648 FAM218AQ96MZ4 157 aa6.86□□□□□ -1.31
TMEM260-211ENST00000556648 STAB1Q9NY15 2570 aa6.86□□□□□ -1.31
TMEM260-211ENST00000556648 M0QXV9 152 aa6.86□□□□□ -1.31
TMEM260-211ENST00000556648 MALP21145 153 aa6.86□□□□□ -1.31
TMEM260-211ENST00000556648 C6orf223Q8N319 242 aa6.86□□□□□ -1.31
TMEM260-211ENST00000556648 SPATA25Q9BR10 227 aa6.86□□□□□ -1.31
TMEM260-211ENST00000556648 CKS1BP61024 79 aa6.85□□□□□ -1.31
TMEM260-211ENST00000556648 ANK2Q01484 3957 aa6.85□□□□□ -1.31
TMEM260-211ENST00000556648 CFAP161Q6P656 301 aa6.85□□□□□ -1.31
TMEM260-211ENST00000556648 CDIP1Q9H305 208 aa6.85□□□□□ -1.31
TMEM260-211ENST00000556648 PRR34Q9NV39 138 aa6.85□□□□□ -1.31
TMEM260-211ENST00000556648 TRAV13-2A0A0B4J235 113 aa6.84□□□□□ -1.31
TMEM260-211ENST00000556648 TEX49A0A1B0GTD5 131 aa6.84□□□□□ -1.31
TMEM260-211ENST00000556648 C10orf25Q5T742 122 aa6.84□□□□□ -1.31
TMEM260-211ENST00000556648 LINC01600Q96MT4 127 aa6.84□□□□□ -1.31
TMEM260-211ENST00000556648 PKD1L1Q8TDX9 2849 aa6.84□□□□□ -1.31
TMEM260-211ENST00000556648 PRR3P79522 188 aaKnown RBP6.84□□□□□ -1.31
TMEM260-211ENST00000556648 SMIM11BQ8TCY0 68 aa6.84□□□□□ -1.31
TMEM260-211ENST00000556648 TENM3Q9P273 2699 aa6.83□□□□□ -1.32
TMEM260-211ENST00000556648 SPAG11BQ08648 103 aa6.83□□□□□ -1.32
TMEM260-211ENST00000556648 Q8NDZ9 215 aa6.83□□□□□ -1.32
TMEM260-211ENST00000556648 UBE2WQ96B02 151 aa6.83□□□□□ -1.32
TMEM260-211ENST00000556648 RPL28P46779 137 aaKnown RBP6.83□□□□□ -1.32
TMEM260-211ENST00000556648 ESRGQ1W209 222 aa6.83□□□□□ -1.32
TMEM260-211ENST00000556648 UNQ6190/PRO20217Q6UXQ8 127 aa6.83□□□□□ -1.32
TMEM260-211ENST00000556648 H3BT86 120 aa6.82□□□□□ -1.32
TMEM260-211ENST00000556648 DEFB131BA0A096LNP1 70 aa6.81□□□□□ -1.32
TMEM260-211ENST00000556648 TRAV8-4A0A0B4J246 113 aa6.81□□□□□ -1.32
TMEM260-211ENST00000556648 H3BNG1 76 aa6.81□□□□□ -1.32
TMEM260-211ENST00000556648 CXCL5P42830 114 aa6.81□□□□□ -1.32
TMEM260-211ENST00000556648 C11orf45Q8TAV5 145 aa6.81□□□□□ -1.32
TMEM260-211ENST00000556648 KLK5Q9Y337 293 aaPredicted RBP6.81□□□□□ -1.32
TMEM260-211ENST00000556648 OR13C6PQ8NH95 151 aa6.81□□□□□ -1.32
TMEM260-211ENST00000556648 SIGMAR1Q99720 223 aa6.81□□□□□ -1.32
TMEM260-211ENST00000556648 A0A087WYN8 130 aa6.8□□□□□ -1.32
TMEM260-211ENST00000556648 Q9HAA7 133 aa6.8□□□□□ -1.32
TMEM260-211ENST00000556648 BAHCC1Q9P281 2608 aa6.8□□□□□ -1.32
TMEM260-211ENST00000556648 K7EIL1 84 aa6.79□□□□□ -1.32
TMEM260-211ENST00000556648 MRAPQ8TCY5 172 aa6.79□□□□□ -1.32
TMEM260-211ENST00000556648 C22orf24Q9Y442 160 aa6.79□□□□□ -1.32
TMEM260-211ENST00000556648 NCR3O14931 201 aa6.79□□□□□ -1.32
TMEM260-211ENST00000556648 MT-ATP8P03928 68 aa6.79□□□□□ -1.32
TMEM260-211ENST00000556648 XGP55808 180 aa6.79□□□□□ -1.32
TMEM260-211ENST00000556648 KRTAP26-1Q6PEX3 210 aa6.79□□□□□ -1.32
TMEM260-211ENST00000556648 MAST4O15021 2626 aa6.79□□□□□ -1.32
TMEM260-211ENST00000556648 TRACP01848 142 aa6.78□□□□□ -1.32
TMEM260-211ENST00000556648 HIGD2BQ4VC39 106 aa6.78□□□□□ -1.32
TMEM260-211ENST00000556648 COX17Q14061 63 aa6.77□□□□□ -1.32
TMEM260-211ENST00000556648 C6orf48Q9UBA6 75 aa6.77□□□□□ -1.33
TMEM260-211ENST00000556648 BAALC-AS2P0C853 105 aa6.76□□□□□ -1.33
TMEM260-211ENST00000556648 LECT2O14960 151 aa6.75□□□□□ -1.33
TMEM260-211ENST00000556648 NDUFC2O95298 119 aa6.75□□□□□ -1.33
TMEM260-211ENST00000556648 DEFB121Q5J5C9 76 aa6.75□□□□□ -1.33
TMEM260-211ENST00000556648 C15orf56Q8N910 161 aa6.75□□□□□ -1.33
TMEM260-211ENST00000556648 TM2D3Q9BRN9 247 aa6.75□□□□□ -1.33
TMEM260-211ENST00000556648 SLPIP03973 132 aa6.74□□□□□ -1.33
TMEM260-211ENST00000556648 LINC01556Q5JQF7 62 aa6.74□□□□□ -1.33
TMEM260-211ENST00000556648 C9orf129Q5T035 196 aaKnown RBP6.73□□□□□ -1.33
TMEM260-211ENST00000556648 XAGE1AQ9HD64 81 aa6.73□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 166.4 ms