RNA–Protein interactions for RNA: ENST00000556607.1

SPTLC2-205, Transcript of serine palmitoyltransferase long chain base subunit 2, humanhuman

TSL 3

Gene SPTLC2, Length 460 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC2-205ENST00000556607 TMEM218A2RU14 115 aa6.43□□□□□ -1.38
SPTLC2-205ENST00000556607 H0Y9J4 135 aa6.43□□□□□ -1.38
SPTLC2-205ENST00000556607 ADCYAP1P18509 176 aa6.43□□□□□ -1.38
SPTLC2-205ENST00000556607 UQCC3Q6UW78 93 aa6.43□□□□□ -1.38
SPTLC2-205ENST00000556607 KRTAP7-1Q8IUC3 87 aa6.43□□□□□ -1.38
SPTLC2-205ENST00000556607 XAGE1AQ9HD64 81 aa6.43□□□□□ -1.38
SPTLC2-205ENST00000556607 TNXBP22105 4242 aa6.42□□□□□ -1.38
SPTLC2-205ENST00000556607 TRAV9-1A0A075B6T8 112 aa6.42□□□□□ -1.38
SPTLC2-205ENST00000556607 F8VRH5 84 aa6.42□□□□□ -1.38
SPTLC2-205ENST00000556607 ERASQ7Z444 233 aa6.42□□□□□ -1.38
SPTLC2-205ENST00000556607 FAM19A3Q7Z5A8 133 aa6.42□□□□□ -1.38
SPTLC2-205ENST00000556607 SMCO4Q9NRQ5 59 aa6.42□□□□□ -1.38
SPTLC2-205ENST00000556607 CXCL5P42830 114 aa6.41□□□□□ -1.38
SPTLC2-205ENST00000556607 FA2HQ7L5A8 372 aa6.41□□□□□ -1.38
SPTLC2-205ENST00000556607 C22orf24Q9Y442 160 aa6.41□□□□□ -1.38
SPTLC2-205ENST00000556607 FABP9Q0Z7S8 132 aa6.4□□□□□ -1.38
SPTLC2-205ENST00000556607 LBHQ53QV2 105 aaPredicted RBP6.4□□□□□ -1.38
SPTLC2-205ENST00000556607 COX7B2Q8TF08 81 aa6.4□□□□□ -1.38
SPTLC2-205ENST00000556607 SEC11CQ9BY50 192 aa6.4□□□□□ -1.38
SPTLC2-205ENST00000556607 GNB1LQ9BYB4 327 aa6.4□□□□□ -1.38
SPTLC2-205ENST00000556607 TINCRA0A1B0GVN0 87 aa6.39□□□□□ -1.39
SPTLC2-205ENST00000556607 LINC01549A6NIU2 74 aa6.39□□□□□ -1.39
SPTLC2-205ENST00000556607 RAB5BP61020 215 aa6.39□□□□□ -1.39
SPTLC2-205ENST00000556607 COX19Q49B96 90 aa6.39□□□□□ -1.39
SPTLC2-205ENST00000556607 MRPL18Q9H0U6 180 aaKnown RBP6.39□□□□□ -1.39
SPTLC2-205ENST00000556607 IGLV1-50A0A075B6I6 118 aa6.38□□□□□ -1.39
SPTLC2-205ENST00000556607 SMIM1B2RUZ4 78 aa6.38□□□□□ -1.39
SPTLC2-205ENST00000556607 NUPR1O60356 82 aa6.38□□□□□ -1.39
SPTLC2-205ENST00000556607 SPINK8P0C7L1 97 aa6.38□□□□□ -1.39
SPTLC2-205ENST00000556607 NDUFA6P56556 154 aa6.38□□□□□ -1.39
SPTLC2-205ENST00000556607 IFITM2Q01629 132 aa6.38□□□□□ -1.39
SPTLC2-205ENST00000556607 PDZD11Q5EBL8 140 aa6.38□□□□□ -1.39
SPTLC2-205ENST00000556607 COMMD7Q86VX2 200 aa6.38□□□□□ -1.39
SPTLC2-205ENST00000556607 RPS10P5Q9NQ39 176 aa6.38□□□□□ -1.39
SPTLC2-205ENST00000556607 ZNF861PO60384 105 aa6.37□□□□□ -1.39
SPTLC2-205ENST00000556607 PMVKQ15126 192 aa6.37□□□□□ -1.39
SPTLC2-205ENST00000556607 MRPL55Q7Z7F7 128 aaKnown RBP6.37□□□□□ -1.39
SPTLC2-205ENST00000556607 CST9LQ9H4G1 147 aa6.37□□□□□ -1.39
SPTLC2-205ENST00000556607 RPL37AP8A6NKH3 93 aa6.36□□□□□ -1.39
SPTLC2-205ENST00000556607 H3BRM9 83 aa6.36□□□□□ -1.39
SPTLC2-205ENST00000556607 RPL13AP40429 203 aaKnown RBP6.36□□□□□ -1.39
SPTLC2-205ENST00000556607 LCE2DQ5TA82 110 aaPredicted RBP6.36□□□□□ -1.39
SPTLC2-205ENST00000556607 GAGE10A6NGK3 116 aa6.35□□□□□ -1.39
SPTLC2-205ENST00000556607 ATP5LO75964 103 aa6.35□□□□□ -1.39
SPTLC2-205ENST00000556607 KRTAP1-4P0C5Y4 121 aa6.35□□□□□ -1.39
SPTLC2-205ENST00000556607 NKAPP1Q8N9T2 125 aa6.35□□□□□ -1.39
SPTLC2-205ENST00000556607 TP73-AS1Q9UF72 201 aa6.35□□□□□ -1.39
SPTLC2-205ENST00000556607 TRAPPC1Q9Y5R8 145 aa6.35□□□□□ -1.39
SPTLC2-205ENST00000556607 LRP2P98164 4655 aa6.34□□□□□ -1.39
SPTLC2-205ENST00000556607 IGLV5-45A0A087WSX0 123 aa6.34□□□□□ -1.39
SPTLC2-205ENST00000556607 LINC01546A6NGU7 62 aa6.34□□□□□ -1.39
SPTLC2-205ENST00000556607 PFN2P35080 140 aa6.34□□□□□ -1.39
SPTLC2-205ENST00000556607 RPL28P46779 137 aaKnown RBP6.34□□□□□ -1.39
SPTLC2-205ENST00000556607 RHEBQ15382 184 aa6.34□□□□□ -1.39
SPTLC2-205ENST00000556607 LINC00167Q96N53 147 aa6.34□□□□□ -1.39
SPTLC2-205ENST00000556607 BCE1O60756 84 aa6.33□□□□□ -1.4
SPTLC2-205ENST00000556607 PRR4Q16378 134 aa6.33□□□□□ -1.4
SPTLC2-205ENST00000556607 LINC00614P0C842 121 aa6.32□□□□□ -1.4
SPTLC2-205ENST00000556607 UBE2AP49459 152 aa6.32□□□□□ -1.4
SPTLC2-205ENST00000556607 PMCHL1Q16048 86 aa6.32□□□□□ -1.4
SPTLC2-205ENST00000556607 CARHSP1Q9Y2V2 147 aaKnown RBP6.32□□□□□ -1.4
SPTLC2-205ENST00000556607 TSPAN13O95857 204 aa6.31□□□□□ -1.4
SPTLC2-205ENST00000556607 HBDP02042 147 aa6.31□□□□□ -1.4
SPTLC2-205ENST00000556607 ZNF625Q96I27 306 aaPredicted RBP6.31□□□□□ -1.4
SPTLC2-205ENST00000556607 IGKV2-28A0A075B6P5 120 aa6.3□□□□□ -1.4
SPTLC2-205ENST00000556607 IGKV2D-28P01615 120 aa6.3□□□□□ -1.4
SPTLC2-205ENST00000556607 IGLC3P0DOY3 106 aa6.3□□□□□ -1.4
SPTLC2-205ENST00000556607 C10orf91Q5T1B1 145 aa6.3□□□□□ -1.4
SPTLC2-205ENST00000556607 TMEM170BQ5T4T1 132 aa6.3□□□□□ -1.4
SPTLC2-205ENST00000556607 C18orf32Q8TCD1 76 aa6.3□□□□□ -1.4
SPTLC2-205ENST00000556607 SCO1O75880 301 aa6.29□□□□□ -1.4
SPTLC2-205ENST00000556607 APOC3P02656 99 aa6.29□□□□□ -1.4
SPTLC2-205ENST00000556607 CRYGAP11844 174 aa6.29□□□□□ -1.4
SPTLC2-205ENST00000556607 ZNF22P17026 224 aaPredicted RBP6.29□□□□□ -1.4
SPTLC2-205ENST00000556607 BAGE3Q86Y29 109 aa6.29□□□□□ -1.4
SPTLC2-205ENST00000556607 TYMSOSQ8TAI1 123 aa6.29□□□□□ -1.4
SPTLC2-205ENST00000556607 KRTAP3-3Q9BYR6 98 aa6.29□□□□□ -1.4
SPTLC2-205ENST00000556607 KRTAP3-2Q9BYR7 98 aa6.29□□□□□ -1.4
SPTLC2-205ENST00000556607 ERG28Q9UKR5 140 aa6.29□□□□□ -1.4
SPTLC2-205ENST00000556607 RNF213Q63HN8 5207 aa6.29□□□□□ -1.4
SPTLC2-205ENST00000556607 A0A096LNJ9 63 aa6.28□□□□□ -1.4
SPTLC2-205ENST00000556607 NDUFA5Q16718 116 aa6.28□□□□□ -1.4
SPTLC2-205ENST00000556607 URB1-AS1Q96HZ7 61 aa6.28□□□□□ -1.4
SPTLC2-205ENST00000556607 IGLV5-37A0A075B6J1 123 aa6.27□□□□□ -1.41
SPTLC2-205ENST00000556607 A0A087X002 238 aa6.27□□□□□ -1.41
SPTLC2-205ENST00000556607 SNAPINO95295 136 aa6.27□□□□□ -1.41
SPTLC2-205ENST00000556607 RPL24P83731 157 aaKnown RBP6.27□□□□□ -1.41
SPTLC2-205ENST00000556607 FAM19A1Q7Z5A9 133 aa6.27□□□□□ -1.41
SPTLC2-205ENST00000556607 ANAPC11Q9NYG5 84 aa6.27□□□□□ -1.41
SPTLC2-205ENST00000556607 LPAP08519 4548 aa6.27□□□□□ -1.41
SPTLC2-205ENST00000556607 IGLV5-39A0A0G2JS06 123 aa6.26□□□□□ -1.41
SPTLC2-205ENST00000556607 C11orf86A6NJI1 115 aa6.26□□□□□ -1.41
SPTLC2-205ENST00000556607 LINC00158P58513 81 aa6.26□□□□□ -1.41
SPTLC2-205ENST00000556607 COX17Q14061 63 aa6.26□□□□□ -1.41
SPTLC2-205ENST00000556607 SND1-IT1Q9HBX3 110 aa6.26□□□□□ -1.41
SPTLC2-205ENST00000556607 CHTOPQ9Y3Y2 248 aaKnown RBP6.26□□□□□ -1.41
SPTLC2-205ENST00000556607 A0A0U1RRA0 63 aa6.25□□□□□ -1.41
SPTLC2-205ENST00000556607 ATP6V1G1O75348 118 aa6.25□□□□□ -1.41
SPTLC2-205ENST00000556607 PRLHP81277 87 aa6.25□□□□□ -1.41
SPTLC2-205ENST00000556607 SVBPQ8N300 66 aa6.25□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms