RNA–Protein interactions for RNA: ENST00000555880.5

TDP1-213, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5 BASIC

Gene TDP1, Length 1,894 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-213ENST00000555880 SND1-IT1Q9HBX3 110 aa4.92□□□□□ -1.62
TDP1-213ENST00000555880 AKAP9Q99996 3911 aa4.92□□□□□ -1.62
TDP1-213ENST00000555880 A0A087WZ39 114 aa4.92□□□□□ -1.62
TDP1-213ENST00000555880 IBA57-AS1B1ANH7 110 aa4.92□□□□□ -1.62
TDP1-213ENST00000555880 BAALC-AS2P0C853 105 aa4.92□□□□□ -1.62
TDP1-213ENST00000555880 DEFB130BP0DP73 79 aa4.92□□□□□ -1.62
TDP1-213ENST00000555880 DEFB130AP0DP74 79 aa4.92□□□□□ -1.62
TDP1-213ENST00000555880 RPL28P46779 137 aaKnown RBP4.92□□□□□ -1.62
TDP1-213ENST00000555880 IGLV4-60A0A075B6I1 120 aa4.91□□□□□ -1.62
TDP1-213ENST00000555880 IGHV3OR16-9A0A0B4J2B5 98 aa4.91□□□□□ -1.62
TDP1-213ENST00000555880 LY6G6DO95868 133 aa4.91□□□□□ -1.62
TDP1-213ENST00000555880 DNAL4O96015 105 aa4.91□□□□□ -1.62
TDP1-213ENST00000555880 INAFM2P0DMQ5 153 aa4.91□□□□□ -1.62
TDP1-213ENST00000555880 LCE4AQ5TA78 99 aa4.91□□□□□ -1.62
TDP1-213ENST00000555880 GYPEP15421 78 aa4.9□□□□□ -1.62
TDP1-213ENST00000555880 SS18Q15532 418 aa4.9□□□□□ -1.62
TDP1-213ENST00000555880 KIR2DL5BQ8NHK3 375 aa4.9□□□□□ -1.62
TDP1-213ENST00000555880 SMR3AQ99954 134 aa4.9□□□□□ -1.62
TDP1-213ENST00000555880 ITPR2Q14571 2701 aa4.9□□□□□ -1.63
TDP1-213ENST00000555880 LINC00959A0A1B0GUT2 108 aa4.9□□□□□ -1.63
TDP1-213ENST00000555880 H0YGX0 51 aa4.9□□□□□ -1.63
TDP1-213ENST00000555880 C6orf226Q5I0X4 101 aa4.9□□□□□ -1.63
TDP1-213ENST00000555880 C5orf38Q86SI9 138 aa4.9□□□□□ -1.63
TDP1-213ENST00000555880 LINC00337Q8N6G1 96 aa4.9□□□□□ -1.63
TDP1-213ENST00000555880 SMIM9A6NGZ8 99 aa4.89□□□□□ -1.63
TDP1-213ENST00000555880 MALP21145 153 aa4.89□□□□□ -1.63
TDP1-213ENST00000555880 PFN2P35080 140 aa4.89□□□□□ -1.63
TDP1-213ENST00000555880 CCL18P55774 89 aa4.89□□□□□ -1.63
TDP1-213ENST00000555880 PDZD2O15018 2839 aa4.88□□□□□ -1.63
TDP1-213ENST00000555880 IGKV2-28A0A075B6P5 120 aa4.88□□□□□ -1.63
TDP1-213ENST00000555880 TRBV7-7A0A0K0K1E9 115 aa4.88□□□□□ -1.63
TDP1-213ENST00000555880 A0A1B0GUV1 79 aa4.88□□□□□ -1.63
TDP1-213ENST00000555880 IGKV2D-28P01615 120 aa4.88□□□□□ -1.63
TDP1-213ENST00000555880 XCL1P47992 114 aa4.88□□□□□ -1.63
TDP1-213ENST00000555880 LINC00612Q8N6U2 182 aa4.88□□□□□ -1.63
TDP1-213ENST00000555880 FAM218AQ96MZ4 157 aa4.88□□□□□ -1.63
TDP1-213ENST00000555880 PRO0255Q9UI72 69 aa4.88□□□□□ -1.63
TDP1-213ENST00000555880 HIVEP2P31629 2446 aa4.88□□□□□ -1.63
TDP1-213ENST00000555880 UNC79Q9P2D8 2635 aa4.88□□□□□ -1.63
TDP1-213ENST00000555880 LINC00643Q86TS7 51 aa4.88□□□□□ -1.63
TDP1-213ENST00000555880 OR13C6PQ8NH95 151 aa4.88□□□□□ -1.63
TDP1-213ENST00000555880 SMIM11BQ8TCY0 68 aa4.88□□□□□ -1.63
TDP1-213ENST00000555880 IMUPQ9GZP8 106 aa4.88□□□□□ -1.63
TDP1-213ENST00000555880 C11orf68Q9H3H3 251 aaKnown RBP4.88□□□□□ -1.63
TDP1-213ENST00000555880 ZNF469Q96JG9 3925 aaPredicted RBP4.88□□□□□ -1.63
TDP1-213ENST00000555880 LYRM9A8MSI8 78 aa4.87□□□□□ -1.63
TDP1-213ENST00000555880 INAFM1C9JVW0 142 aa4.87□□□□□ -1.63
TDP1-213ENST00000555880 H3BS24 57 aa4.87□□□□□ -1.63
TDP1-213ENST00000555880 NHLRC4P0CG21 123 aaPredicted RBP4.87□□□□□ -1.63
TDP1-213ENST00000555880 GAGE2AQ6NT46 116 aa4.87□□□□□ -1.63
TDP1-213ENST00000555880 Q8IZM0 81 aa4.87□□□□□ -1.63
TDP1-213ENST00000555880 LINC01561Q8N1V8 128 aa4.87□□□□□ -1.63
TDP1-213ENST00000555880 LINC00482Q8N8I6 264 aa4.87□□□□□ -1.63
TDP1-213ENST00000555880 Q9HAA7 133 aa4.87□□□□□ -1.63
TDP1-213ENST00000555880 FN1P02751 2386 aaKnown RBP4.87□□□□□ -1.63
TDP1-213ENST00000555880 NOTCH2Q04721 2471 aa4.86□□□□□ -1.63
TDP1-213ENST00000555880 MAST4O15021 2626 aa4.86□□□□□ -1.63
TDP1-213ENST00000555880 A0A087WYN8 130 aa4.86□□□□□ -1.63
TDP1-213ENST00000555880 B5MCH6 92 aa4.86□□□□□ -1.63
TDP1-213ENST00000555880 CLPSL2Q6UWE3 100 aa4.86□□□□□ -1.63
TDP1-213ENST00000555880 X6R8D5 127 aa4.86□□□□□ -1.63
TDP1-213ENST00000555880 CXCL5P42830 114 aa4.85□□□□□ -1.63
TDP1-213ENST00000555880 APOC4P55056 127 aa4.85□□□□□ -1.63
TDP1-213ENST00000555880 C9orf66Q5T8R8 295 aa4.85□□□□□ -1.63
TDP1-213ENST00000555880 NBEAL2Q6ZNJ1 2754 aa4.85□□□□□ -1.63
TDP1-213ENST00000555880 A0A096LPF7 62 aa4.84□□□□□ -1.63
TDP1-213ENST00000555880 LECT2O14960 151 aa4.84□□□□□ -1.63
TDP1-213ENST00000555880 COX17Q14061 63 aa4.84□□□□□ -1.63
TDP1-213ENST00000555880 CD164L2Q6UWJ8 174 aa4.84□□□□□ -1.63
TDP1-213ENST00000555880 FAM236AA0A1B0GUQ0 79 aa4.83□□□□□ -1.64
TDP1-213ENST00000555880 FAM236BA0A1B0GV22 79 aa4.83□□□□□ -1.64
TDP1-213ENST00000555880 CCDC179H3BU77 68 aa4.83□□□□□ -1.64
TDP1-213ENST00000555880 ANGP03950 147 aaKnown RBP4.83□□□□□ -1.64
TDP1-213ENST00000555880 DAD1P61803 113 aa4.83□□□□□ -1.64
TDP1-213ENST00000555880 LINC00269Q8N2A0 174 aa4.83□□□□□ -1.64
TDP1-213ENST00000555880 SMCR5Q8TEV8 140 aa4.83□□□□□ -1.64
TDP1-213ENST00000555880 ORMDL1Q9P0S3 153 aa4.83□□□□□ -1.64
TDP1-213ENST00000555880 C22orf24Q9Y442 160 aa4.83□□□□□ -1.64
TDP1-213ENST00000555880 ATP5G1P05496 136 aa4.83□□□□□ -1.64
TDP1-213ENST00000555880 KRTAP10-3P60369 221 aa4.83□□□□□ -1.64
TDP1-213ENST00000555880 DEFB135Q30KP9 77 aa4.83□□□□□ -1.64
TDP1-213ENST00000555880 SDIM1Q6ZPB5 146 aa4.83□□□□□ -1.64
TDP1-213ENST00000555880 CHCHD10Q8WYQ3 142 aaPredicted RBP4.83□□□□□ -1.64
TDP1-213ENST00000555880 KRTAP4-9Q9BYQ8 210 aa4.83□□□□□ -1.64
TDP1-213ENST00000555880 SS18L2Q9UHA2 77 aa4.83□□□□□ -1.64
TDP1-213ENST00000555880 A0A1B0GX51 115 aa4.82□□□□□ -1.64
TDP1-213ENST00000555880 NDUFC2O95298 119 aa4.82□□□□□ -1.64
TDP1-213ENST00000555880 REG3AQ06141 175 aa4.82□□□□□ -1.64
TDP1-213ENST00000555880 C14orf132Q9NPU4 83 aa4.82□□□□□ -1.64
TDP1-213ENST00000555880 TMEM126AQ9H061 195 aa4.81□□□□□ -1.64
TDP1-213ENST00000555880 CUBNO60494 3623 aa4.81□□□□□ -1.64
TDP1-213ENST00000555880 IGLV10-54A0A075B6I4 117 aa4.81□□□□□ -1.64
TDP1-213ENST00000555880 IGHV4-28A0A0C4DH34 117 aa4.81□□□□□ -1.64
TDP1-213ENST00000555880 DEFB4AO15263 64 aa4.81□□□□□ -1.64
TDP1-213ENST00000555880 OBSCN-AS1Q96MR7 158 aa4.81□□□□□ -1.64
TDP1-213ENST00000555880 KLK5Q9Y337 293 aaPredicted RBP4.81□□□□□ -1.64
TDP1-213ENST00000555880 VWFP04275 2813 aa4.8□□□□□ -1.64
TDP1-213ENST00000555880 NCR3O14931 201 aa4.8□□□□□ -1.64
TDP1-213ENST00000555880 MIFP14174 115 aa4.8□□□□□ -1.64
TDP1-213ENST00000555880 MUC7Q8TAX7 377 aa4.8□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms