RNA–Protein interactions for RNA: ENST00000555497.5

TMEM260-207, Transcript of transmembrane protein 260, humanhuman

TSL 2

Gene TMEM260, Length 2,218 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-207ENST00000555497 M0QXV9 152 aa16.67■□□□□ 0.26
TMEM260-207ENST00000555497 SLC25A20O43772 301 aa16.67■□□□□ 0.26
TMEM260-207ENST00000555497 LINC01620Q4KN68 170 aa16.66■□□□□ 0.26
TMEM260-207ENST00000555497 COPS9Q8WXC6 57 aa16.66■□□□□ 0.26
TMEM260-207ENST00000555497 MRPL23Q16540 153 aaKnown RBP16.66■□□□□ 0.26
TMEM260-207ENST00000555497 CLEC2BQ92478 149 aa16.66■□□□□ 0.26
TMEM260-207ENST00000555497 CMYA5Q8N3K9 4069 aa16.65■□□□□ 0.26
TMEM260-207ENST00000555497 C11orf68Q9H3H3 251 aaKnown RBP16.65■□□□□ 0.26
TMEM260-207ENST00000555497 ANGP03950 147 aaKnown RBP16.64■□□□□ 0.25
TMEM260-207ENST00000555497 C3orf56Q8N813 242 aa16.64■□□□□ 0.25
TMEM260-207ENST00000555497 LINC00158P58513 81 aa16.64■□□□□ 0.25
TMEM260-207ENST00000555497 EGFEM1PQ0D2K5 195 aa16.64■□□□□ 0.25
TMEM260-207ENST00000555497 PPDPFQ9H3Y8 114 aa16.63■□□□□ 0.25
TMEM260-207ENST00000555497 COX6CP09669 75 aa16.62■□□□□ 0.25
TMEM260-207ENST00000555497 C6orf226Q5I0X4 101 aa16.62■□□□□ 0.25
TMEM260-207ENST00000555497 IGLV10-54A0A075B6I4 117 aa16.61■□□□□ 0.25
TMEM260-207ENST00000555497 REG3AQ06141 175 aa16.61■□□□□ 0.25
TMEM260-207ENST00000555497 CHCHD10Q8WYQ3 142 aaPredicted RBP16.61■□□□□ 0.25
TMEM260-207ENST00000555497 IBA57-AS1B1ANH7 110 aa16.6■□□□□ 0.25
TMEM260-207ENST00000555497 PFN2P35080 140 aa16.6■□□□□ 0.25
TMEM260-207ENST00000555497 LELP1Q5T871 98 aa16.6■□□□□ 0.25
TMEM260-207ENST00000555497 C2orf82Q6UX34 121 aa16.6■□□□□ 0.25
TMEM260-207ENST00000555497 CD164L2Q6UWJ8 174 aa16.59■□□□□ 0.25
TMEM260-207ENST00000555497 Q8IZM0 81 aa16.58■□□□□ 0.25
TMEM260-207ENST00000555497 LST1O00453 97 aa16.58■□□□□ 0.24
TMEM260-207ENST00000555497 CCL18P55774 89 aa16.58■□□□□ 0.24
TMEM260-207ENST00000555497 IGKV2-28A0A075B6P5 120 aa16.57■□□□□ 0.24
TMEM260-207ENST00000555497 IGKV2D-28P01615 120 aa16.57■□□□□ 0.24
TMEM260-207ENST00000555497 LINC01561Q8N1V8 128 aa16.57■□□□□ 0.24
TMEM260-207ENST00000555497 TRBV10-2A0A0K0K1G8 114 aa16.57■□□□□ 0.24
TMEM260-207ENST00000555497 SND1-IT1Q9HBX3 110 aa16.57■□□□□ 0.24
TMEM260-207ENST00000555497 ANK2Q01484 3957 aa16.57■□□□□ 0.24
TMEM260-207ENST00000555497 CYSRT1A8MQ03 144 aa16.55■□□□□ 0.24
TMEM260-207ENST00000555497 KIAA0087Q14695 138 aa16.55■□□□□ 0.24
TMEM260-207ENST00000555497 LINC00337Q8N6G1 96 aa16.55■□□□□ 0.24
TMEM260-207ENST00000555497 COX7A2LO14548 114 aa16.55■□□□□ 0.24
TMEM260-207ENST00000555497 LINC01600Q96MT4 127 aa16.55■□□□□ 0.24
TMEM260-207ENST00000555497 MAST4O15021 2626 aa16.55■□□□□ 0.24
TMEM260-207ENST00000555497 LYPD5Q6UWN5 251 aa16.54■□□□□ 0.24
TMEM260-207ENST00000555497 TENM3Q9P273 2699 aa16.53■□□□□ 0.24
TMEM260-207ENST00000555497 NTN5Q8WTR8 489 aaPredicted RBP16.51■□□□□ 0.23
TMEM260-207ENST00000555497 Q6ZTC4 211 aa16.5■□□□□ 0.23
TMEM260-207ENST00000555497 TRAV13-2A0A0B4J235 113 aa16.5■□□□□ 0.23
TMEM260-207ENST00000555497 KLK12Q9UKR0 248 aa16.5■□□□□ 0.23
TMEM260-207ENST00000555497 CRPP02741 224 aa16.49■□□□□ 0.23
TMEM260-207ENST00000555497 ANAPC13Q9BS18 74 aa16.49■□□□□ 0.23
TMEM260-207ENST00000555497 MALP21145 153 aa16.48■□□□□ 0.23
TMEM260-207ENST00000555497 KPRPQ5T749 579 aaPredicted RBP16.48■□□□□ 0.23
TMEM260-207ENST00000555497 PRR34Q9NV39 138 aa16.48■□□□□ 0.23
TMEM260-207ENST00000555497 DNAH3Q8TD57 4116 aa16.48■□□□□ 0.23
TMEM260-207ENST00000555497 ENHOQ6UWT2 76 aa16.47■□□□□ 0.23
TMEM260-207ENST00000555497 TEX49A0A1B0GTD5 131 aa16.46■□□□□ 0.23
TMEM260-207ENST00000555497 FAM218AQ96MZ4 157 aa16.45■□□□□ 0.22
TMEM260-207ENST00000555497 H3BT86 120 aa16.45■□□□□ 0.22
TMEM260-207ENST00000555497 RPL28P46779 137 aaKnown RBP16.45■□□□□ 0.22
TMEM260-207ENST00000555497 CFAP161Q6P656 301 aa16.45■□□□□ 0.22
TMEM260-207ENST00000555497 A0A0J9YWU9 116 aa16.44■□□□□ 0.22
TMEM260-207ENST00000555497 C9orf116Q5BN46 136 aaPredicted RBP16.43■□□□□ 0.22
TMEM260-207ENST00000555497 COL6A5A8TX70 2615 aa16.43■□□□□ 0.22
TMEM260-207ENST00000555497 H3BNG1 76 aa16.43■□□□□ 0.22
TMEM260-207ENST00000555497 SNCGO76070 127 aa16.43■□□□□ 0.22
TMEM260-207ENST00000555497 NOTCH1P46531 2555 aa16.43■□□□□ 0.22
TMEM260-207ENST00000555497 WFDC10BQ8IUB3 73 aa16.42■□□□□ 0.22
TMEM260-207ENST00000555497 SMIM11BQ8TCY0 68 aa16.42■□□□□ 0.22
TMEM260-207ENST00000555497 GAGE2BQ13066 116 aa16.42■□□□□ 0.22
TMEM260-207ENST00000555497 GAGE2EQ4V326 116 aa16.42■□□□□ 0.22
TMEM260-207ENST00000555497 C6orf223Q8N319 242 aa16.42■□□□□ 0.22
TMEM260-207ENST00000555497 GAGE2DQ9UEU5 116 aa16.42■□□□□ 0.22
TMEM260-207ENST00000555497 NANOS2P60321 138 aaKnown RBP16.41■□□□□ 0.22
TMEM260-207ENST00000555497 CXCL5P42830 114 aa16.41■□□□□ 0.22
TMEM260-207ENST00000555497 LINC00526Q96FQ7 95 aa16.41■□□□□ 0.22
TMEM260-207ENST00000555497 KLK5Q9Y337 293 aaPredicted RBP16.4■□□□□ 0.22
TMEM260-207ENST00000555497 TRAV8-4A0A0B4J246 113 aa16.39■□□□□ 0.22
TMEM260-207ENST00000555497 NHLRC4P0CG21 123 aaPredicted RBP16.39■□□□□ 0.22
TMEM260-207ENST00000555497 UBE2WQ96B02 151 aa16.39■□□□□ 0.22
TMEM260-207ENST00000555497 BAHCC1Q9P281 2608 aa16.39■□□□□ 0.21
TMEM260-207ENST00000555497 C10orf25Q5T742 122 aa16.39■□□□□ 0.21
TMEM260-207ENST00000555497 SVIPQ8NHG7 77 aa16.38■□□□□ 0.21
TMEM260-207ENST00000555497 PRB2P02812 416 aaPredicted RBP16.38■□□□□ 0.21
TMEM260-207ENST00000555497 Q6Q795 121 aa16.38■□□□□ 0.21
TMEM260-207ENST00000555497 PRR3P79522 188 aaKnown RBP16.37■□□□□ 0.21
TMEM260-207ENST00000555497 UNQ6190/PRO20217Q6UXQ8 127 aa16.37■□□□□ 0.21
TMEM260-207ENST00000555497 SPAG11BQ08648 103 aa16.37■□□□□ 0.21
TMEM260-207ENST00000555497 COX17Q14061 63 aa16.37■□□□□ 0.21
TMEM260-207ENST00000555497 NDUFV3P56181 108 aaKnown RBP16.36■□□□□ 0.21
TMEM260-207ENST00000555497 ESRGQ1W209 222 aa16.36■□□□□ 0.21
TMEM260-207ENST00000555497 TRACP01848 142 aa16.35■□□□□ 0.21
TMEM260-207ENST00000555497 OR13C6PQ8NH95 151 aa16.35■□□□□ 0.21
TMEM260-207ENST00000555497 C11orf45Q8TAV5 145 aa16.34■□□□□ 0.21
TMEM260-207ENST00000555497 DEFB131BA0A096LNP1 70 aa16.33■□□□□ 0.2
TMEM260-207ENST00000555497 C15orf53Q8NAA6 179 aa16.32■□□□□ 0.2
TMEM260-207ENST00000555497 Q8NDZ9 215 aa16.32■□□□□ 0.2
TMEM260-207ENST00000555497 TTC32Q5I0X7 151 aa16.31■□□□□ 0.2
TMEM260-207ENST00000555497 Q9HAA7 133 aa16.31■□□□□ 0.2
TMEM260-207ENST00000555497 A0A087WYN8 130 aa16.3■□□□□ 0.2
TMEM260-207ENST00000555497 C22orf24Q9Y442 160 aa16.3■□□□□ 0.2
TMEM260-207ENST00000555497 NBEAL1Q6ZS30 2694 aa16.29■□□□□ 0.2
TMEM260-207ENST00000555497 KRTAP26-1Q6PEX3 210 aa16.29■□□□□ 0.2
TMEM260-207ENST00000555497 BAALC-AS2P0C853 105 aa16.29■□□□□ 0.2
TMEM260-207ENST00000555497 DEFB121Q5J5C9 76 aa16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms