RNA–Protein interactions for RNA: ENST00000555386.5

PSEN1-213, Transcript of presenilin 1, humanhuman

TSL 1 (best)

Gene PSEN1, Length 1,484 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-213ENST00000555386 TRBV20-1A0A075B6N2 111 aa6.75□□□□□ -1.33
PSEN1-213ENST00000555386 APOMO95445 188 aa6.75□□□□□ -1.33
PSEN1-213ENST00000555386 LORP23490 312 aaPredicted RBP6.75□□□□□ -1.33
PSEN1-213ENST00000555386 RNF151Q2KHN1 245 aa6.75□□□□□ -1.33
PSEN1-213ENST00000555386 VPS25Q9BRG1 176 aa6.75□□□□□ -1.33
PSEN1-213ENST00000555386 Q9H8V8 135 aa6.75□□□□□ -1.33
PSEN1-213ENST00000555386 NDUFA12Q9UI09 145 aa6.75□□□□□ -1.33
PSEN1-213ENST00000555386 IGHV3-64A0A075B6Q5 118 aa6.74□□□□□ -1.33
PSEN1-213ENST00000555386 H3BMG7 143 aa6.74□□□□□ -1.33
PSEN1-213ENST00000555386 SH2D6Q7Z4S9 175 aa6.74□□□□□ -1.33
PSEN1-213ENST00000555386 PRO0461Q9UI25 63 aa6.74□□□□□ -1.33
PSEN1-213ENST00000555386 A4D1N5 150 aa6.73□□□□□ -1.33
PSEN1-213ENST00000555386 J3QR89 54 aa6.73□□□□□ -1.33
PSEN1-213ENST00000555386 RNASE13Q5GAN3 156 aaKnown RBP6.73□□□□□ -1.33
PSEN1-213ENST00000555386 WFDC10BQ8IUB3 73 aa6.73□□□□□ -1.33
PSEN1-213ENST00000555386 MUSTN1Q8IVN3 82 aa6.73□□□□□ -1.33
PSEN1-213ENST00000555386 LITAFQ99732 161 aa6.73□□□□□ -1.33
PSEN1-213ENST00000555386 TRAV8-3A0A0A6YYJ7 113 aa6.73□□□□□ -1.33
PSEN1-213ENST00000555386 IGLV5-39A0A0G2JS06 123 aa6.73□□□□□ -1.33
PSEN1-213ENST00000555386 NDUFA1O15239 70 aa6.73□□□□□ -1.33
PSEN1-213ENST00000555386 SPINK8P0C7L1 97 aa6.73□□□□□ -1.33
PSEN1-213ENST00000555386 IFITM1P13164 125 aa6.73□□□□□ -1.33
PSEN1-213ENST00000555386 NTM-AS1Q6ZSK4 140 aa6.73□□□□□ -1.33
PSEN1-213ENST00000555386 TMEM243Q9BU79 118 aa6.73□□□□□ -1.33
PSEN1-213ENST00000555386 LOC107984156A0A0G2JMH3 177 aa6.72□□□□□ -1.33
PSEN1-213ENST00000555386 IGHV3-33P01772 117 aa6.72□□□□□ -1.33
PSEN1-213ENST00000555386 LINC00694P0DN24 101 aa6.72□□□□□ -1.33
PSEN1-213ENST00000555386 WFDC2Q14508 124 aa6.72□□□□□ -1.33
PSEN1-213ENST00000555386 MIAQ16674 131 aa6.72□□□□□ -1.33
PSEN1-213ENST00000555386 LINC00242Q5T6M2 205 aa6.72□□□□□ -1.33
PSEN1-213ENST00000555386 ARL17AQ8IVW1 177 aa6.72□□□□□ -1.33
PSEN1-213ENST00000555386 TMEM101Q96IK0 257 aa6.72□□□□□ -1.33
PSEN1-213ENST00000555386 CDC42SE2Q9NRR3 84 aa6.72□□□□□ -1.33
PSEN1-213ENST00000555386 CDKN2A-AS1Q9UH64 79 aa6.72□□□□□ -1.33
PSEN1-213ENST00000555386 ERG28Q9UKR5 140 aa6.72□□□□□ -1.33
PSEN1-213ENST00000555386 NBDYA0A0U1RRE5 68 aa6.71□□□□□ -1.34
PSEN1-213ENST00000555386 UBE2L6O14933 153 aa6.71□□□□□ -1.34
PSEN1-213ENST00000555386 CIRBPQ14011 172 aaKnown RBP6.71□□□□□ -1.34
PSEN1-213ENST00000555386 LELP1Q5T871 98 aa6.71□□□□□ -1.34
PSEN1-213ENST00000555386 COPS9Q8WXC6 57 aa6.71□□□□□ -1.34
PSEN1-213ENST00000555386 UPK3BQ9BT76 320 aa6.71□□□□□ -1.34
PSEN1-213ENST00000555386 M0QXV9 152 aa6.7□□□□□ -1.34
PSEN1-213ENST00000555386 PSMB2P49721 201 aa6.7□□□□□ -1.34
PSEN1-213ENST00000555386 Q8N3U1 123 aa6.7□□□□□ -1.34
PSEN1-213ENST00000555386 PPDPFQ9H3Y8 114 aa6.7□□□□□ -1.34
PSEN1-213ENST00000555386 DNAH17Q9UFH2 4485 aa6.7□□□□□ -1.34
PSEN1-213ENST00000555386 TMEM262E9PQX1 116 aa6.69□□□□□ -1.34
PSEN1-213ENST00000555386 PCP4P48539 62 aa6.69□□□□□ -1.34
PSEN1-213ENST00000555386 KRTAP1-5Q9BYS1 174 aa6.69□□□□□ -1.34
PSEN1-213ENST00000555386 TRBV30A0A0K0K1B3 111 aa6.68□□□□□ -1.34
PSEN1-213ENST00000555386 SMIM1B2RUZ4 78 aa6.68□□□□□ -1.34
PSEN1-213ENST00000555386 TCL1BO95988 128 aa6.68□□□□□ -1.34
PSEN1-213ENST00000555386 SCGB1C2P0DMR2 95 aa6.68□□□□□ -1.34
PSEN1-213ENST00000555386 HERV-K104P63124 156 aa6.68□□□□□ -1.34
PSEN1-213ENST00000555386 COX6A2Q02221 97 aa6.68□□□□□ -1.34
PSEN1-213ENST00000555386 ETDBQ3ZM63 59 aa6.68□□□□□ -1.34
PSEN1-213ENST00000555386 ADAMTSL4-AS1Q5T5F5 129 aa6.68□□□□□ -1.34
PSEN1-213ENST00000555386 CHCHD5Q9BSY4 110 aa6.68□□□□□ -1.34
PSEN1-213ENST00000555386 FAT2Q9NYQ8 4349 aa6.68□□□□□ -1.34
PSEN1-213ENST00000555386 TRBV6-8A0A0A6YYG3 113 aa6.67□□□□□ -1.34
PSEN1-213ENST00000555386 PRSS2P07478 247 aa6.67□□□□□ -1.34
PSEN1-213ENST00000555386 TTC32Q5I0X7 151 aa6.67□□□□□ -1.34
PSEN1-213ENST00000555386 Q6ZR54 194 aa6.67□□□□□ -1.34
PSEN1-213ENST00000555386 TRAV13-1A0A0B4J241 112 aa6.66□□□□□ -1.34
PSEN1-213ENST00000555386 GAGE6Q13070 117 aa6.66□□□□□ -1.34
PSEN1-213ENST00000555386 C1orf134Q5TEV5 83 aa6.66□□□□□ -1.34
PSEN1-213ENST00000555386 LINC01600Q96MT4 127 aa6.66□□□□□ -1.34
PSEN1-213ENST00000555386 Q9HAA7 133 aa6.66□□□□□ -1.34
PSEN1-213ENST00000555386 DNAH10OSP0CZ25 163 aa6.66□□□□□ -1.34
PSEN1-213ENST00000555386 ATXN8Q156A1 80 aa6.66□□□□□ -1.34
PSEN1-213ENST00000555386 Q1RN00 199 aa6.66□□□□□ -1.34
PSEN1-213ENST00000555386 ZNF625Q96I27 306 aaPredicted RBP6.66□□□□□ -1.34
PSEN1-213ENST00000555386 COX6CP09669 75 aa6.65□□□□□ -1.35
PSEN1-213ENST00000555386 FOXI1Q12951 378 aa6.65□□□□□ -1.35
PSEN1-213ENST00000555386 LINC01556Q5JQF7 62 aa6.65□□□□□ -1.35
PSEN1-213ENST00000555386 SFTA2Q6UW10 78 aa6.65□□□□□ -1.35
PSEN1-213ENST00000555386 TEN1Q86WV5 123 aa6.65□□□□□ -1.35
PSEN1-213ENST00000555386 C6orf223Q8N319 242 aa6.65□□□□□ -1.35
PSEN1-213ENST00000555386 EPPK1P58107 5090 aaKnown RBP6.65□□□□□ -1.35
PSEN1-213ENST00000555386 LINC00308Q8TCZ7 52 aa6.64□□□□□ -1.35
PSEN1-213ENST00000555386 PPDPFLQ8WWR9 84 aa6.64□□□□□ -1.35
PSEN1-213ENST00000555386 KLK12Q9UKR0 248 aa6.64□□□□□ -1.35
PSEN1-213ENST00000555386 A0A1B0GUV1 79 aa6.63□□□□□ -1.35
PSEN1-213ENST00000555386 RTL8CO15255 209 aa6.63□□□□□ -1.35
PSEN1-213ENST00000555386 ANGP03950 147 aaKnown RBP6.63□□□□□ -1.35
PSEN1-213ENST00000555386 CLPSL2Q6UWE3 100 aa6.63□□□□□ -1.35
PSEN1-213ENST00000555386 MTURNQ8N3F0 131 aa6.63□□□□□ -1.35
PSEN1-213ENST00000555386 H7C2G1 150 aa6.62□□□□□ -1.35
PSEN1-213ENST00000555386 TRIAP1O43715 76 aa6.62□□□□□ -1.35
PSEN1-213ENST00000555386 SLC25A20O43772 301 aa6.62□□□□□ -1.35
PSEN1-213ENST00000555386 UBE2WQ96B02 151 aa6.62□□□□□ -1.35
PSEN1-213ENST00000555386 DNAH11Q96DT5 4516 aa6.62□□□□□ -1.35
PSEN1-213ENST00000555386 IGHV3OR16-9A0A0B4J2B5 98 aa6.61□□□□□ -1.35
PSEN1-213ENST00000555386 GAGE12HA6NDE8 117 aa6.61□□□□□ -1.35
PSEN1-213ENST00000555386 PKHD1P08F94 4074 aa6.61□□□□□ -1.35
PSEN1-213ENST00000555386 LINC01620Q4KN68 170 aa6.61□□□□□ -1.35
PSEN1-213ENST00000555386 MEIG1Q5JSS6 88 aa6.61□□□□□ -1.35
PSEN1-213ENST00000555386 LINC01561Q8N1V8 128 aa6.61□□□□□ -1.35
PSEN1-213ENST00000555386 COX7B2Q8TF08 81 aa6.61□□□□□ -1.35
PSEN1-213ENST00000555386 IGLV4-60A0A075B6I1 120 aa6.6□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms