RNA–Protein interactions for RNA: ENST00000555022.5

SYNE2-217, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best)

Gene SYNE2, Length 3,396 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-217ENST00000555022 TRGV4A0A0C4DH28 118 aa6.28□□□□□ -1.4
SYNE2-217ENST00000555022 UCNP55089 124 aa6.28□□□□□ -1.4
SYNE2-217ENST00000555022 SPATA3Q8NHX4 192 aa6.28□□□□□ -1.4
SYNE2-217ENST00000555022 TMEM243Q9BU79 118 aa6.28□□□□□ -1.4
SYNE2-217ENST00000555022 TRAV13-2A0A0B4J235 113 aa6.28□□□□□ -1.4
SYNE2-217ENST00000555022 TIMM17BO60830 172 aa6.28□□□□□ -1.4
SYNE2-217ENST00000555022 Q8N3U1 123 aa6.28□□□□□ -1.4
SYNE2-217ENST00000555022 IMUPQ9GZP8 106 aa6.28□□□□□ -1.4
SYNE2-217ENST00000555022 CDC42SE2Q9NRR3 84 aa6.28□□□□□ -1.4
SYNE2-217ENST00000555022 K7EQD1 137 aa6.27□□□□□ -1.4
SYNE2-217ENST00000555022 SERP2Q8N6R1 65 aa6.27□□□□□ -1.4
SYNE2-217ENST00000555022 ITPR3Q14573 2671 aa6.27□□□□□ -1.41
SYNE2-217ENST00000555022 M0R2N4 97 aa6.27□□□□□ -1.41
SYNE2-217ENST00000555022 IGSF10Q6WRI0 2623 aa6.27□□□□□ -1.41
SYNE2-217ENST00000555022 PRB2P02812 416 aaPredicted RBP6.27□□□□□ -1.41
SYNE2-217ENST00000555022 KLK9Q2XQG4 91 aa6.27□□□□□ -1.41
SYNE2-217ENST00000555022 H3BUA1 57 aa6.26□□□□□ -1.41
SYNE2-217ENST00000555022 DEFB4AO15263 64 aa6.26□□□□□ -1.41
SYNE2-217ENST00000555022 TMEM89A2RUT3 159 aa6.26□□□□□ -1.41
SYNE2-217ENST00000555022 C1orf158Q8N1D5 194 aa6.26□□□□□ -1.41
SYNE2-217ENST00000555022 CRYGAP11844 174 aa6.26□□□□□ -1.41
SYNE2-217ENST00000555022 UNC79Q9P2D8 2635 aa6.26□□□□□ -1.41
SYNE2-217ENST00000555022 LAMTOR3Q9UHA4 124 aa6.25□□□□□ -1.41
SYNE2-217ENST00000555022 A0A0U1RQV1 116 aa6.25□□□□□ -1.41
SYNE2-217ENST00000555022 ORMDL1Q9P0S3 153 aa6.25□□□□□ -1.41
SYNE2-217ENST00000555022 IGLV5-45A0A087WSX0 123 aa6.24□□□□□ -1.41
SYNE2-217ENST00000555022 NBPF19A0A087WUL8 3843 aa6.24□□□□□ -1.41
SYNE2-217ENST00000555022 ODF3L2Q3SX64 289 aa6.24□□□□□ -1.41
SYNE2-217ENST00000555022 CR1P17927 2039 aa6.24□□□□□ -1.41
SYNE2-217ENST00000555022 UPK3BQ9BT76 320 aa6.24□□□□□ -1.41
SYNE2-217ENST00000555022 RMI2Q96E14 147 aa6.24□□□□□ -1.41
SYNE2-217ENST00000555022 COPS9Q8WXC6 57 aa6.23□□□□□ -1.41
SYNE2-217ENST00000555022 LINC01600Q96MT4 127 aa6.23□□□□□ -1.41
SYNE2-217ENST00000555022 DAD1P61803 113 aa6.23□□□□□ -1.41
SYNE2-217ENST00000555022 LINC00269Q8N2A0 174 aa6.23□□□□□ -1.41
SYNE2-217ENST00000555022 USP24Q9UPU5 2620 aa6.22□□□□□ -1.41
SYNE2-217ENST00000555022 C6orf99Q4VX62 202 aa6.22□□□□□ -1.41
SYNE2-217ENST00000555022 Q6JHZ5 121 aa6.22□□□□□ -1.41
SYNE2-217ENST00000555022 Q8N9L7 120 aa6.22□□□□□ -1.41
SYNE2-217ENST00000555022 ZNF702PQ9H963 129 aa6.22□□□□□ -1.41
SYNE2-217ENST00000555022 TRAV10A0A0B4J240 114 aa6.21□□□□□ -1.41
SYNE2-217ENST00000555022 FAM222AQ5U5X8 452 aa6.21□□□□□ -1.41
SYNE2-217ENST00000555022 HTN3P15516 51 aa6.21□□□□□ -1.42
SYNE2-217ENST00000555022 TMEM258P61165 79 aa6.21□□□□□ -1.42
SYNE2-217ENST00000555022 SS18Q15532 418 aa6.21□□□□□ -1.42
SYNE2-217ENST00000555022 DEFB114Q30KQ6 69 aa6.21□□□□□ -1.42
SYNE2-217ENST00000555022 MPLKIPQ8TAP9 179 aa6.21□□□□□ -1.42
SYNE2-217ENST00000555022 S100A7L2Q5SY68 101 aa6.2□□□□□ -1.42
SYNE2-217ENST00000555022 LINC00474Q9P2X8 69 aa6.2□□□□□ -1.42
SYNE2-217ENST00000555022 Q5XG85 94 aa6.2□□□□□ -1.42
SYNE2-217ENST00000555022 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP6.2□□□□□ -1.42
SYNE2-217ENST00000555022 ZNF843Q8N446 348 aa6.2□□□□□ -1.42
SYNE2-217ENST00000555022 PDZD2O15018 2839 aa6.19□□□□□ -1.42
SYNE2-217ENST00000555022 VWFP04275 2813 aa6.19□□□□□ -1.42
SYNE2-217ENST00000555022 FAM236DA0A1B0GTK5 79 aa6.19□□□□□ -1.42
SYNE2-217ENST00000555022 FAM236CP0DP71 79 aa6.19□□□□□ -1.42
SYNE2-217ENST00000555022 C6orf223Q8N319 242 aa6.19□□□□□ -1.42
SYNE2-217ENST00000555022 BAHCC1Q9P281 2608 aa6.19□□□□□ -1.42
SYNE2-217ENST00000555022 LRCOL1A6NCL2 159 aa6.19□□□□□ -1.42
SYNE2-217ENST00000555022 RBM3P98179 157 aaKnown RBP6.19□□□□□ -1.42
SYNE2-217ENST00000555022 TMEM86BQ8N661 226 aa6.19□□□□□ -1.42
SYNE2-217ENST00000555022 UBL5Q9BZL1 73 aa6.19□□□□□ -1.42
SYNE2-217ENST00000555022 PRORYQ9H606 182 aa6.19□□□□□ -1.42
SYNE2-217ENST00000555022 H0YGX0 51 aa6.18□□□□□ -1.42
SYNE2-217ENST00000555022 CCKP06307 115 aa6.18□□□□□ -1.42
SYNE2-217ENST00000555022 Q8NDZ9 215 aa6.18□□□□□ -1.42
SYNE2-217ENST00000555022 LINC00336Q6ZUF6 198 aa6.18□□□□□ -1.42
SYNE2-217ENST00000555022 XAGE1AQ9HD64 81 aa6.18□□□□□ -1.42
SYNE2-217ENST00000555022 F8WEM9 126 aa6.18□□□□□ -1.42
SYNE2-217ENST00000555022 GYPEP15421 78 aa6.18□□□□□ -1.42
SYNE2-217ENST00000555022 KRTAP21-3Q3LHN1 58 aa6.18□□□□□ -1.42
SYNE2-217ENST00000555022 MRAPQ8TCY5 172 aa6.18□□□□□ -1.42
SYNE2-217ENST00000555022 A0A096LNT2 108 aa6.17□□□□□ -1.42
SYNE2-217ENST00000555022 IGHV3OR16-9A0A0B4J2B5 98 aa6.17□□□□□ -1.42
SYNE2-217ENST00000555022 TRBV6-4A0A1B0GX49 114 aa6.17□□□□□ -1.42
SYNE2-217ENST00000555022 HIVEP1P15822 2718 aa6.17□□□□□ -1.42
SYNE2-217ENST00000555022 LINC00959A0A1B0GUT2 108 aa6.17□□□□□ -1.42
SYNE2-217ENST00000555022 Q8N814 137 aa6.17□□□□□ -1.42
SYNE2-217ENST00000555022 TEP1Q99973 2627 aaKnown RBP6.16□□□□□ -1.42
SYNE2-217ENST00000555022 BRK1Q8WUW1 75 aa6.16□□□□□ -1.42
SYNE2-217ENST00000555022 TRBV6-8A0A0A6YYG3 113 aa6.16□□□□□ -1.42
SYNE2-217ENST00000555022 ANGP03950 147 aaKnown RBP6.16□□□□□ -1.42
SYNE2-217ENST00000555022 SEC61GP60059 68 aa6.15□□□□□ -1.42
SYNE2-217ENST00000555022 KRTAP10-9P60411 292 aa6.15□□□□□ -1.42
SYNE2-217ENST00000555022 Q6ZQY7 126 aa6.15□□□□□ -1.42
SYNE2-217ENST00000555022 UBR5O95071 2799 aaPredicted RBP6.15□□□□□ -1.42
SYNE2-217ENST00000555022 LINC01356Q8N9X3 169 aa6.15□□□□□ -1.42
SYNE2-217ENST00000555022 IGHV4-28A0A0C4DH34 117 aa6.15□□□□□ -1.43
SYNE2-217ENST00000555022 IBA57-AS1B1ANH7 110 aa6.15□□□□□ -1.43
SYNE2-217ENST00000555022 NANOS2P60321 138 aaKnown RBP6.15□□□□□ -1.43
SYNE2-217ENST00000555022 C10orf25Q5T742 122 aa6.15□□□□□ -1.43
SYNE2-217ENST00000555022 TM2D3Q9BRN9 247 aa6.15□□□□□ -1.43
SYNE2-217ENST00000555022 OVOL2Q9BRP0 275 aa6.15□□□□□ -1.43
SYNE2-217ENST00000555022 ZNF469Q96JG9 3925 aaPredicted RBP6.14□□□□□ -1.43
SYNE2-217ENST00000555022 J3QLI3 93 aa6.14□□□□□ -1.43
SYNE2-217ENST00000555022 PF4P02776 101 aa6.14□□□□□ -1.43
SYNE2-217ENST00000555022 TRBV10-1A0A0K0K1A3 114 aa6.14□□□□□ -1.43
SYNE2-217ENST00000555022 UNQ6190/PRO20217Q6UXQ8 127 aa6.14□□□□□ -1.43
SYNE2-217ENST00000555022 BBC3Q96PG8 261 aaPredicted RBP6.14□□□□□ -1.43
SYNE2-217ENST00000555022 A0A087WZ39 114 aa6.13□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms