RNA–Protein interactions for RNA: ENST00000554290.1

CPSF2-203, Transcript of cleavage and polyadenylation specific factor 2, humanhuman

TSL 4

Gene CPSF2, Length 558 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF2-203ENST00000554290 KRTAP1-4P0C5Y4 121 aa11.29□□□□□ -0.6
CPSF2-203ENST00000554290 RPL13AP40429 203 aaKnown RBP11.29□□□□□ -0.6
CPSF2-203ENST00000554290 LBHQ53QV2 105 aaPredicted RBP11.29□□□□□ -0.6
CPSF2-203ENST00000554290 TIMM17AQ99595 171 aa11.29□□□□□ -0.6
CPSF2-203ENST00000554290 CDKN2A-AS1Q9UH64 79 aa11.29□□□□□ -0.6
CPSF2-203ENST00000554290 LINC00469Q8N7U9 141 aa11.28□□□□□ -0.6
CPSF2-203ENST00000554290 C22orf24Q9Y442 160 aa11.28□□□□□ -0.6
CPSF2-203ENST00000554290 F8VRH5 84 aa11.27□□□□□ -0.61
CPSF2-203ENST00000554290 NUPR1O60356 82 aa11.27□□□□□ -0.61
CPSF2-203ENST00000554290 TOMM6Q96B49 74 aa11.27□□□□□ -0.61
CPSF2-203ENST00000554290 XAGE1AQ9HD64 81 aa11.27□□□□□ -0.61
CPSF2-203ENST00000554290 ZNF861PO60384 105 aa11.26□□□□□ -0.61
CPSF2-203ENST00000554290 CXCL5P42830 114 aa11.25□□□□□ -0.61
CPSF2-203ENST00000554290 ERASQ7Z444 233 aa11.25□□□□□ -0.61
CPSF2-203ENST00000554290 SCGB3A1Q96QR1 104 aa11.25□□□□□ -0.61
CPSF2-203ENST00000554290 CARHSP1Q9Y2V2 147 aaKnown RBP11.25□□□□□ -0.61
CPSF2-203ENST00000554290 KIAA1644Q3SXP7 199 aa11.23□□□□□ -0.61
CPSF2-203ENST00000554290 TP73-AS1Q9UF72 201 aa11.23□□□□□ -0.61
CPSF2-203ENST00000554290 LINC01549A6NIU2 74 aa11.22□□□□□ -0.61
CPSF2-203ENST00000554290 TRAV9-1A0A075B6T8 112 aa11.21□□□□□ -0.61
CPSF2-203ENST00000554290 PDZD11Q5EBL8 140 aa11.21□□□□□ -0.61
CPSF2-203ENST00000554290 MRPL55Q7Z7F7 128 aaKnown RBP11.21□□□□□ -0.61
CPSF2-203ENST00000554290 TINCRA0A1B0GVN0 87 aa11.2□□□□□ -0.62
CPSF2-203ENST00000554290 SMIM1B2RUZ4 78 aa11.2□□□□□ -0.62
CPSF2-203ENST00000554290 CLLU1Q5K131 121 aa11.2□□□□□ -0.62
CPSF2-203ENST00000554290 RPL28P46779 137 aaKnown RBP11.19□□□□□ -0.62
CPSF2-203ENST00000554290 COX7B2Q8TF08 81 aa11.19□□□□□ -0.62
CPSF2-203ENST00000554290 PRR4Q16378 134 aa11.18□□□□□ -0.62
CPSF2-203ENST00000554290 IGLV5-45A0A087WSX0 123 aa11.17□□□□□ -0.62
CPSF2-203ENST00000554290 BCE1O60756 84 aa11.17□□□□□ -0.62
CPSF2-203ENST00000554290 ADCYAP1P18509 176 aa11.17□□□□□ -0.62
CPSF2-203ENST00000554290 S100PP25815 95 aa11.17□□□□□ -0.62
CPSF2-203ENST00000554290 UQCC3Q6UW78 93 aa11.17□□□□□ -0.62
CPSF2-203ENST00000554290 GNB1LQ9BYB4 327 aa11.17□□□□□ -0.62
CPSF2-203ENST00000554290 LINC01546A6NGU7 62 aa11.16□□□□□ -0.62
CPSF2-203ENST00000554290 CST9LQ9H4G1 147 aa11.16□□□□□ -0.62
CPSF2-203ENST00000554290 TMEM218A2RU14 115 aa11.15□□□□□ -0.62
CPSF2-203ENST00000554290 LINC00167Q96N53 147 aa11.15□□□□□ -0.62
CPSF2-203ENST00000554290 RPL37AP8A6NKH3 93 aa11.14□□□□□ -0.63
CPSF2-203ENST00000554290 PMVKQ15126 192 aa11.14□□□□□ -0.63
CPSF2-203ENST00000554290 COX19Q49B96 90 aa11.14□□□□□ -0.63
CPSF2-203ENST00000554290 SPINK8P0C7L1 97 aa11.13□□□□□ -0.63
CPSF2-203ENST00000554290 RAB5BP61020 215 aa11.13□□□□□ -0.63
CPSF2-203ENST00000554290 FA2HQ7L5A8 372 aa11.13□□□□□ -0.63
CPSF2-203ENST00000554290 MRPL18Q9H0U6 180 aaKnown RBP11.13□□□□□ -0.63
CPSF2-203ENST00000554290 H3BRM9 83 aa11.12□□□□□ -0.63
CPSF2-203ENST00000554290 CRYGAP11844 174 aa11.12□□□□□ -0.63
CPSF2-203ENST00000554290 NKAPP1Q8N9T2 125 aa11.12□□□□□ -0.63
CPSF2-203ENST00000554290 SMCO4Q9NRQ5 59 aa11.12□□□□□ -0.63
CPSF2-203ENST00000554290 GAGE10A6NGK3 116 aa11.11□□□□□ -0.63
CPSF2-203ENST00000554290 ATP5LO75964 103 aa11.11□□□□□ -0.63
CPSF2-203ENST00000554290 IGLV5-37A0A075B6J1 123 aa11.1□□□□□ -0.63
CPSF2-203ENST00000554290 TSPAN13O95857 204 aa11.1□□□□□ -0.63
CPSF2-203ENST00000554290 SEC11CQ9BY50 192 aa11.1□□□□□ -0.63
CPSF2-203ENST00000554290 A0A087X002 238 aa11.09□□□□□ -0.63
CPSF2-203ENST00000554290 FABP9Q0Z7S8 132 aa11.09□□□□□ -0.63
CPSF2-203ENST00000554290 TYMSOSQ8TAI1 123 aa11.09□□□□□ -0.63
CPSF2-203ENST00000554290 LPAP08519 4548 aa11.09□□□□□ -0.63
CPSF2-203ENST00000554290 UBE2AP49459 152 aa11.08□□□□□ -0.64
CPSF2-203ENST00000554290 IGLC3P0DOY3 106 aa11.05□□□□□ -0.64
CPSF2-203ENST00000554290 PFN2P35080 140 aa11.05□□□□□ -0.64
CPSF2-203ENST00000554290 NDUFA6P56556 154 aa11.05□□□□□ -0.64
CPSF2-203ENST00000554290 IGKV2-28A0A075B6P5 120 aa11.03□□□□□ -0.64
CPSF2-203ENST00000554290 IGLV5-39A0A0G2JS06 123 aa11.03□□□□□ -0.64
CPSF2-203ENST00000554290 IGKV2D-28P01615 120 aa11.03□□□□□ -0.64
CPSF2-203ENST00000554290 KRTAP13-1Q8IUC0 172 aa11.03□□□□□ -0.64
CPSF2-203ENST00000554290 ANAPC11Q9NYG5 84 aa11.03□□□□□ -0.64
CPSF2-203ENST00000554290 IFITM2Q01629 132 aa11.02□□□□□ -0.65
CPSF2-203ENST00000554290 RPS10P5Q9NQ39 176 aa11.02□□□□□ -0.65
CPSF2-203ENST00000554290 ZNF22P17026 224 aaPredicted RBP11.01□□□□□ -0.65
CPSF2-203ENST00000554290 COX17Q14061 63 aa11.01□□□□□ -0.65
CPSF2-203ENST00000554290 RHEBQ15382 184 aa11.01□□□□□ -0.65
CPSF2-203ENST00000554290 FAM229BQ4G0N7 80 aa11.01□□□□□ -0.65
CPSF2-203ENST00000554290 ERG28Q9UKR5 140 aa11.01□□□□□ -0.65
CPSF2-203ENST00000554290 SCO1O75880 301 aa11□□□□□ -0.65
CPSF2-203ENST00000554290 LINC00614P0C842 121 aa11□□□□□ -0.65
CPSF2-203ENST00000554290 RPL24P83731 157 aaKnown RBP11□□□□□ -0.65
CPSF2-203ENST00000554290 SND1-IT1Q9HBX3 110 aa11□□□□□ -0.65
CPSF2-203ENST00000554290 COMMD7Q86VX2 200 aa10.99□□□□□ -0.65
CPSF2-203ENST00000554290 A0A096LNJ9 63 aa10.98□□□□□ -0.65
CPSF2-203ENST00000554290 HBDP02042 147 aa10.98□□□□□ -0.65
CPSF2-203ENST00000554290 VPREB1P12018 145 aa10.98□□□□□ -0.65
CPSF2-203ENST00000554290 KRTAP13-2Q52LG2 175 aa10.98□□□□□ -0.65
CPSF2-203ENST00000554290 C10orf91Q5T1B1 145 aa10.98□□□□□ -0.65
CPSF2-203ENST00000554290 SFTA2Q6UW10 78 aa10.98□□□□□ -0.65
CPSF2-203ENST00000554290 FAM19A1Q7Z5A9 133 aa10.97□□□□□ -0.65
CPSF2-203ENST00000554290 C18orf32Q8TCD1 76 aa10.97□□□□□ -0.65
CPSF2-203ENST00000554290 ZNF625Q96I27 306 aaPredicted RBP10.97□□□□□ -0.65
CPSF2-203ENST00000554290 TMEM126AQ9H061 195 aa10.97□□□□□ -0.65
CPSF2-203ENST00000554290 TRAPPC1Q9Y5R8 145 aa10.97□□□□□ -0.65
CPSF2-203ENST00000554290 IGKV2D-26A0A0A0MRZ7 120 aa10.96□□□□□ -0.65
CPSF2-203ENST00000554290 A0A0U1RQV1 116 aa10.96□□□□□ -0.65
CPSF2-203ENST00000554290 PRLHP81277 87 aa10.96□□□□□ -0.65
CPSF2-203ENST00000554290 URB1-AS1Q96HZ7 61 aa10.96□□□□□ -0.65
CPSF2-203ENST00000554290 TMEM170BQ5T4T1 132 aa10.95□□□□□ -0.66
CPSF2-203ENST00000554290 BAGE3Q86Y29 109 aa10.95□□□□□ -0.66
CPSF2-203ENST00000554290 LINC00304Q8N9R0 145 aa10.95□□□□□ -0.66
CPSF2-203ENST00000554290 TMEM238C9JI98 176 aa10.94□□□□□ -0.66
CPSF2-203ENST00000554290 PMCHL1Q16048 86 aa10.94□□□□□ -0.66
CPSF2-203ENST00000554290 C11orf86A6NJI1 115 aa10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 1263.1 ms