RNA–Protein interactions for RNA: ENST00000553659.1

ACTN1-209, Transcript of actinin alpha 1, humanhuman

TSL 4

Gene ACTN1, Length 434 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-209ENST00000553659 KRTAP10-2P60368 255 aa10.85□□□□□ -0.67
ACTN1-209ENST00000553659 UBE2V1Q13404 147 aa10.85□□□□□ -0.67
ACTN1-209ENST00000553659 TRAV8-3A0A0A6YYJ7 113 aa10.84□□□□□ -0.67
ACTN1-209ENST00000553659 A0A0J9YXY3 114 aa10.84□□□□□ -0.67
ACTN1-209ENST00000553659 RPL24P83731 157 aaKnown RBP10.84□□□□□ -0.67
ACTN1-209ENST00000553659 SFTA2Q6UW10 78 aa10.84□□□□□ -0.67
ACTN1-209ENST00000553659 TMEM262E9PQX1 116 aa10.83□□□□□ -0.68
ACTN1-209ENST00000553659 IGHV3-30P01768 117 aa10.83□□□□□ -0.68
ACTN1-209ENST00000553659 IGHV3-30-5P0DP03 117 aa10.83□□□□□ -0.68
ACTN1-209ENST00000553659 HERV-K104P63124 156 aa10.83□□□□□ -0.68
ACTN1-209ENST00000553659 CIRBPQ14011 172 aaKnown RBP10.83□□□□□ -0.68
ACTN1-209ENST00000553659 LELP1Q5T871 98 aa10.83□□□□□ -0.68
ACTN1-209ENST00000553659 GTF2H5Q6ZYL4 71 aa10.83□□□□□ -0.68
ACTN1-209ENST00000553659 LINC01561Q8N1V8 128 aa10.83□□□□□ -0.68
ACTN1-209ENST00000553659 COPS9Q8WXC6 57 aa10.83□□□□□ -0.68
ACTN1-209ENST00000553659 IGLV4-60A0A075B6I1 120 aa10.82□□□□□ -0.68
ACTN1-209ENST00000553659 SMIM1B2RUZ4 78 aa10.82□□□□□ -0.68
ACTN1-209ENST00000553659 RBX1P62877 108 aa10.82□□□□□ -0.68
ACTN1-209ENST00000553659 COX6A2Q02221 97 aa10.82□□□□□ -0.68
ACTN1-209ENST00000553659 SS18Q15532 418 aa10.82□□□□□ -0.68
ACTN1-209ENST00000553659 C10orf126Q8N4M7 172 aa10.82□□□□□ -0.68
ACTN1-209ENST00000553659 SPANXDQ9BXN6 97 aa10.82□□□□□ -0.68
ACTN1-209ENST00000553659 SPANXCQ9NY87 97 aa10.82□□□□□ -0.68
ACTN1-209ENST00000553659 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.81□□□□□ -0.68
ACTN1-209ENST00000553659 FABP2P12104 132 aa10.81□□□□□ -0.68
ACTN1-209ENST00000553659 IFITM1P13164 125 aa10.81□□□□□ -0.68
ACTN1-209ENST00000553659 A0A1W2PPM0 123 aa10.8□□□□□ -0.68
ACTN1-209ENST00000553659 H3BUT2 72 aa10.8□□□□□ -0.68
ACTN1-209ENST00000553659 RAB37Q96AX2 223 aa10.8□□□□□ -0.68
ACTN1-209ENST00000553659 APOBP04114 4563 aaKnown RBP10.79□□□□□ -0.68
ACTN1-209ENST00000553659 A0A096LPF7 62 aa10.79□□□□□ -0.68
ACTN1-209ENST00000553659 LINC00959A0A1B0GUT2 108 aa10.79□□□□□ -0.68
ACTN1-209ENST00000553659 A0A087WZ39 114 aa10.78□□□□□ -0.68
ACTN1-209ENST00000553659 GAGE10A6NGK3 116 aa10.78□□□□□ -0.68
ACTN1-209ENST00000553659 K7EP13 123 aa10.78□□□□□ -0.68
ACTN1-209ENST00000553659 LYRM7Q5U5X0 104 aa10.78□□□□□ -0.68
ACTN1-209ENST00000553659 Q6ZRN7 208 aaPredicted RBP10.78□□□□□ -0.68
ACTN1-209ENST00000553659 PPDPFQ9H3Y8 114 aa10.78□□□□□ -0.68
ACTN1-209ENST00000553659 PGPEP1Q9NXJ5 209 aa10.78□□□□□ -0.68
ACTN1-209ENST00000553659 IGHV3OR16-9A0A0B4J2B5 98 aa10.77□□□□□ -0.69
ACTN1-209ENST00000553659 EPM2AB3EWF7 344 aa10.77□□□□□ -0.69
ACTN1-209ENST00000553659 K7EP34 96 aa10.77□□□□□ -0.69
ACTN1-209ENST00000553659 MIAQ16674 131 aa10.77□□□□□ -0.69
ACTN1-209ENST00000553659 A0A0B4J2C4 111 aa10.76□□□□□ -0.69
ACTN1-209ENST00000553659 K7ERJ3 54 aa10.76□□□□□ -0.69
ACTN1-209ENST00000553659 LITAFQ99732 161 aa10.76□□□□□ -0.69
ACTN1-209ENST00000553659 DNAH5Q8TE73 4624 aa10.76□□□□□ -0.69
ACTN1-209ENST00000553659 IGKV3OR2-268A0A0C4DH90 116 aa10.75□□□□□ -0.69
ACTN1-209ENST00000553659 COX7B2Q8TF08 81 aa10.75□□□□□ -0.69
ACTN1-209ENST00000553659 MUSTN1Q8IVN3 82 aa10.74□□□□□ -0.69
ACTN1-209ENST00000553659 ZNF625Q96I27 306 aaPredicted RBP10.74□□□□□ -0.69
ACTN1-209ENST00000553659 SPCS1Q9Y6A9 102 aa10.74□□□□□ -0.69
ACTN1-209ENST00000553659 CD164L2Q6UWJ8 174 aa10.73□□□□□ -0.69
ACTN1-209ENST00000553659 A4D1N5 150 aa10.72□□□□□ -0.69
ACTN1-209ENST00000553659 ANGP03950 147 aaKnown RBP10.72□□□□□ -0.69
ACTN1-209ENST00000553659 XGP55808 180 aa10.72□□□□□ -0.69
ACTN1-209ENST00000553659 MEIG1Q5JSS6 88 aa10.72□□□□□ -0.69
ACTN1-209ENST00000553659 LYPD5Q6UWN5 251 aa10.72□□□□□ -0.69
ACTN1-209ENST00000553659 PRO1854Q9UHT4 67 aa10.72□□□□□ -0.69
ACTN1-209ENST00000553659 APOMO95445 188 aa10.71□□□□□ -0.69
ACTN1-209ENST00000553659 PRSS2P07478 247 aa10.71□□□□□ -0.69
ACTN1-209ENST00000553659 CFC1BP0CG36 223 aa10.71□□□□□ -0.69
ACTN1-209ENST00000553659 CFC1P0CG37 223 aa10.71□□□□□ -0.69
ACTN1-209ENST00000553659 INAFM2P0DMQ5 153 aa10.71□□□□□ -0.69
ACTN1-209ENST00000553659 REG3AQ06141 175 aa10.71□□□□□ -0.69
ACTN1-209ENST00000553659 FUSP35637 526 aaKnown RBP eCLIP10.7□□□□□ -0.7
ACTN1-209ENST00000553659 CXCL5P42830 114 aa10.7□□□□□ -0.7
ACTN1-209ENST00000553659 Q8IZM0 81 aa10.7□□□□□ -0.7
ACTN1-209ENST00000553659 LINC00269Q8N2A0 174 aa10.7□□□□□ -0.7
ACTN1-209ENST00000553659 COX7A2LO14548 114 aa10.69□□□□□ -0.7
ACTN1-209ENST00000553659 XCL1P47992 114 aa10.69□□□□□ -0.7
ACTN1-209ENST00000553659 TRAV8-4A0A0B4J246 113 aa10.68□□□□□ -0.7
ACTN1-209ENST00000553659 IBA57-AS1B1ANH7 110 aa10.68□□□□□ -0.7
ACTN1-209ENST00000553659 TSPAN13O95857 204 aa10.68□□□□□ -0.7
ACTN1-209ENST00000553659 ADAMTSL4-AS1Q5T5F5 129 aa10.68□□□□□ -0.7
ACTN1-209ENST00000553659 C5orf38Q86SI9 138 aa10.68□□□□□ -0.7
ACTN1-209ENST00000553659 PRR34Q9NV39 138 aa10.68□□□□□ -0.7
ACTN1-209ENST00000553659 TOMM7Q9P0U1 55 aa10.68□□□□□ -0.7
ACTN1-209ENST00000553659 A0A087WTM6 91 aa10.67□□□□□ -0.7
ACTN1-209ENST00000553659 CRPP02741 224 aa10.67□□□□□ -0.7
ACTN1-209ENST00000553659 CHCHD10Q8WYQ3 142 aaPredicted RBP10.67□□□□□ -0.7
ACTN1-209ENST00000553659 NAA38Q9BRA0 125 aaKnown RBP10.67□□□□□ -0.7
ACTN1-209ENST00000553659 ERG28Q9UKR5 140 aa10.67□□□□□ -0.7
ACTN1-209ENST00000553659 C6orf226Q5I0X4 101 aa10.66□□□□□ -0.7
ACTN1-209ENST00000553659 Q5VSD8 79 aa10.66□□□□□ -0.7
ACTN1-209ENST00000553659 LINC00308Q8TCZ7 52 aa10.66□□□□□ -0.7
ACTN1-209ENST00000553659 TRBV20-1A0A075B6N2 111 aa10.65□□□□□ -0.7
ACTN1-209ENST00000553659 DNAH10OSP0CZ25 163 aa10.65□□□□□ -0.7
ACTN1-209ENST00000553659 MALP21145 153 aa10.65□□□□□ -0.7
ACTN1-209ENST00000553659 KRTAP10-1P60331 282 aa10.65□□□□□ -0.7
ACTN1-209ENST00000553659 IGHV3-33P01772 117 aa10.64□□□□□ -0.71
ACTN1-209ENST00000553659 CFAP161Q6P656 301 aa10.64□□□□□ -0.71
ACTN1-209ENST00000553659 CLPSL2Q6UWE3 100 aa10.64□□□□□ -0.71
ACTN1-209ENST00000553659 HERC1Q15751 4861 aa10.62□□□□□ -0.71
ACTN1-209ENST00000553659 FOXI1Q12951 378 aa10.62□□□□□ -0.71
ACTN1-209ENST00000553659 Q1RN00 199 aa10.62□□□□□ -0.71
ACTN1-209ENST00000553659 KLK12Q9UKR0 248 aa10.62□□□□□ -0.71
ACTN1-209ENST00000553659 LOC107984156A0A0G2JMH3 177 aa10.61□□□□□ -0.71
ACTN1-209ENST00000553659 F8W1H4 67 aa10.61□□□□□ -0.71
ACTN1-209ENST00000553659 CKS1BP61024 79 aa10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms