RNA–Protein interactions for RNA: ENST00000552089.5

RBFOX1-214, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 5 BASIC

Gene RBFOX1, Length 1,430 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-214ENST00000552089 LINC00242Q5T6M2 205 aa8.24□□□□□ -1.09
RBFOX1-214ENST00000552089 TRAV10A0A0B4J240 114 aa8.23□□□□□ -1.09
RBFOX1-214ENST00000552089 NDUFA1O15239 70 aa8.23□□□□□ -1.09
RBFOX1-214ENST00000552089 UBE2DNLQ8IWF7 75 aa8.23□□□□□ -1.09
RBFOX1-214ENST00000552089 CHCHD5Q9BSY4 110 aa8.23□□□□□ -1.09
RBFOX1-214ENST00000552089 SPANXDQ9BXN6 97 aa8.23□□□□□ -1.09
RBFOX1-214ENST00000552089 TTTY13Q9BZ97 58 aa8.23□□□□□ -1.09
RBFOX1-214ENST00000552089 SPANXCQ9NY87 97 aa8.23□□□□□ -1.09
RBFOX1-214ENST00000552089 NDUFA12Q9UI09 145 aa8.23□□□□□ -1.09
RBFOX1-214ENST00000552089 A0A1W2PPM0 123 aa8.22□□□□□ -1.09
RBFOX1-214ENST00000552089 IGHV3-30P01768 117 aa8.22□□□□□ -1.09
RBFOX1-214ENST00000552089 IGHV3-30-5P0DP03 117 aa8.22□□□□□ -1.09
RBFOX1-214ENST00000552089 Q6ZTC4 211 aa8.22□□□□□ -1.09
RBFOX1-214ENST00000552089 NHP2Q9NX24 153 aaKnown RBP8.22□□□□□ -1.09
RBFOX1-214ENST00000552089 DEFB104AQ8WTQ1 72 aa8.21□□□□□ -1.09
RBFOX1-214ENST00000552089 CDKN2A-AS1Q9UH64 79 aa8.21□□□□□ -1.09
RBFOX1-214ENST00000552089 A0A0B4J2C4 111 aa8.2□□□□□ -1.1
RBFOX1-214ENST00000552089 KRTAP9-6A0A140TA67 174 aa8.2□□□□□ -1.1
RBFOX1-214ENST00000552089 TRBV20-1A0A075B6N2 111 aa8.2□□□□□ -1.1
RBFOX1-214ENST00000552089 H3BUT2 72 aa8.2□□□□□ -1.1
RBFOX1-214ENST00000552089 SS18Q15532 418 aa8.2□□□□□ -1.1
RBFOX1-214ENST00000552089 KRTAP9-2Q9BYQ4 174 aa8.2□□□□□ -1.1
RBFOX1-214ENST00000552089 ICOSQ9Y6W8 199 aa8.2□□□□□ -1.1
RBFOX1-214ENST00000552089 TRAV13-1A0A0B4J241 112 aa8.19□□□□□ -1.1
RBFOX1-214ENST00000552089 K7EP34 96 aa8.19□□□□□ -1.1
RBFOX1-214ENST00000552089 TSPEAR-AS2P59090 65 aa8.19□□□□□ -1.1
RBFOX1-214ENST00000552089 PRO1854Q9UHT4 67 aa8.19□□□□□ -1.1
RBFOX1-214ENST00000552089 A0A087WZ39 114 aa8.18□□□□□ -1.1
RBFOX1-214ENST00000552089 SMIM1B2RUZ4 78 aa8.18□□□□□ -1.1
RBFOX1-214ENST00000552089 KRTAP10-2P60368 255 aa8.18□□□□□ -1.1
RBFOX1-214ENST00000552089 LELP1Q5T871 98 aa8.18□□□□□ -1.1
RBFOX1-214ENST00000552089 C10orf126Q8N4M7 172 aa8.18□□□□□ -1.1
RBFOX1-214ENST00000552089 IGHV3OR16-9A0A0B4J2B5 98 aa8.17□□□□□ -1.1
RBFOX1-214ENST00000552089 LOC100131303A0A0U1RQF7 123 aa8.17□□□□□ -1.1
RBFOX1-214ENST00000552089 KRTAP29-1A8MX34 341 aaPredicted RBP8.17□□□□□ -1.1
RBFOX1-214ENST00000552089 F5H768 121 aa8.17□□□□□ -1.1
RBFOX1-214ENST00000552089 F8W1H4 67 aa8.17□□□□□ -1.1
RBFOX1-214ENST00000552089 K7EP13 123 aa8.17□□□□□ -1.1
RBFOX1-214ENST00000552089 MIAQ16674 131 aa8.17□□□□□ -1.1
RBFOX1-214ENST00000552089 SPCS1Q9Y6A9 102 aa8.17□□□□□ -1.1
RBFOX1-214ENST00000552089 TMEM262E9PQX1 116 aa8.16□□□□□ -1.1
RBFOX1-214ENST00000552089 SPINK8P0C7L1 97 aa8.16□□□□□ -1.1
RBFOX1-214ENST00000552089 HTN3P15516 51 aa8.16□□□□□ -1.1
RBFOX1-214ENST00000552089 XGP55808 180 aa8.16□□□□□ -1.1
RBFOX1-214ENST00000552089 GAGE6Q13070 117 aa8.16□□□□□ -1.1
RBFOX1-214ENST00000552089 RAB37Q96AX2 223 aa8.16□□□□□ -1.1
RBFOX1-214ENST00000552089 DEFB131BA0A096LNP1 70 aa8.15□□□□□ -1.1
RBFOX1-214ENST00000552089 TRAV8-3A0A0A6YYJ7 113 aa8.15□□□□□ -1.1
RBFOX1-214ENST00000552089 LINC00959A0A1B0GUT2 108 aa8.15□□□□□ -1.1
RBFOX1-214ENST00000552089 CXCL5P42830 114 aa8.15□□□□□ -1.1
RBFOX1-214ENST00000552089 RBX1P62877 108 aa8.15□□□□□ -1.1
RBFOX1-214ENST00000552089 COX6A2Q02221 97 aa8.15□□□□□ -1.1
RBFOX1-214ENST00000552089 RNASE13Q5GAN3 156 aaKnown RBP8.15□□□□□ -1.1
RBFOX1-214ENST00000552089 C6orf223Q8N319 242 aa8.15□□□□□ -1.1
RBFOX1-214ENST00000552089 ZNF625Q96I27 306 aaPredicted RBP8.15□□□□□ -1.1
RBFOX1-214ENST00000552089 LITAFQ99732 161 aa8.14□□□□□ -1.11
RBFOX1-214ENST00000552089 LRP2P98164 4655 aa8.14□□□□□ -1.11
RBFOX1-214ENST00000552089 TRAV8-4A0A0B4J246 113 aa8.13□□□□□ -1.11
RBFOX1-214ENST00000552089 IBA57-AS1B1ANH7 110 aa8.13□□□□□ -1.11
RBFOX1-214ENST00000552089 PRSS2P07478 247 aa8.13□□□□□ -1.11
RBFOX1-214ENST00000552089 CFC1BP0CG36 223 aa8.13□□□□□ -1.11
RBFOX1-214ENST00000552089 CFC1P0CG37 223 aa8.13□□□□□ -1.11
RBFOX1-214ENST00000552089 CD164L2Q6UWJ8 174 aa8.13□□□□□ -1.11
RBFOX1-214ENST00000552089 Q9H8V8 135 aa8.13□□□□□ -1.11
RBFOX1-214ENST00000552089 ERG28Q9UKR5 140 aa8.13□□□□□ -1.11
RBFOX1-214ENST00000552089 IGLV4-60A0A075B6I1 120 aa8.12□□□□□ -1.11
RBFOX1-214ENST00000552089 IGHV3-64A0A075B6Q5 118 aa8.12□□□□□ -1.11
RBFOX1-214ENST00000552089 A4D1N5 150 aa8.12□□□□□ -1.11
RBFOX1-214ENST00000552089 SMR3BP02814 79 aaPredicted RBP8.12□□□□□ -1.11
RBFOX1-214ENST00000552089 COX6CP09669 75 aa8.12□□□□□ -1.11
RBFOX1-214ENST00000552089 MUSTN1Q8IVN3 82 aa8.12□□□□□ -1.11
RBFOX1-214ENST00000552089 COX7B2Q8TF08 81 aa8.12□□□□□ -1.11
RBFOX1-214ENST00000552089 PGPEP1Q9NXJ5 209 aa8.12□□□□□ -1.11
RBFOX1-214ENST00000552089 LRP1Q07954 4544 aaKnown RBP8.12□□□□□ -1.11
RBFOX1-214ENST00000552089 FAM229AH3BQW9 127 aa8.12□□□□□ -1.11
RBFOX1-214ENST00000552089 COX17Q14061 63 aa8.12□□□□□ -1.11
RBFOX1-214ENST00000552089 MEIG1Q5JSS6 88 aa8.12□□□□□ -1.11
RBFOX1-214ENST00000552089 Q8IZM0 81 aa8.12□□□□□ -1.11
RBFOX1-214ENST00000552089 TRBV30A0A0K0K1B3 111 aa8.11□□□□□ -1.11
RBFOX1-214ENST00000552089 K7ERU9 68 aa8.11□□□□□ -1.11
RBFOX1-214ENST00000552089 APOMO95445 188 aa8.11□□□□□ -1.11
RBFOX1-214ENST00000552089 A0A096LPF7 62 aa8.1□□□□□ -1.11
RBFOX1-214ENST00000552089 M0QXV9 152 aa8.1□□□□□ -1.11
RBFOX1-214ENST00000552089 PRR34Q9NV39 138 aa8.1□□□□□ -1.11
RBFOX1-214ENST00000552089 K7ERJ3 54 aa8.09□□□□□ -1.11
RBFOX1-214ENST00000552089 COX7A2LO14548 114 aa8.09□□□□□ -1.11
RBFOX1-214ENST00000552089 IGHV3-33P01772 117 aa8.09□□□□□ -1.11
RBFOX1-214ENST00000552089 REG3AQ06141 175 aa8.09□□□□□ -1.11
RBFOX1-214ENST00000552089 C6orf226Q5I0X4 101 aa8.09□□□□□ -1.11
RBFOX1-214ENST00000552089 C15orf53Q8NAA6 179 aa8.09□□□□□ -1.11
RBFOX1-214ENST00000552089 PKHD1L1Q86WI1 4243 aa8.08□□□□□ -1.12
RBFOX1-214ENST00000552089 F8WDY8 70 aa8.08□□□□□ -1.12
RBFOX1-214ENST00000552089 J3QR89 54 aa8.08□□□□□ -1.12
RBFOX1-214ENST00000552089 TSPAN13O95857 204 aa8.08□□□□□ -1.12
RBFOX1-214ENST00000552089 LYPD5Q6UWN5 251 aa8.08□□□□□ -1.12
RBFOX1-214ENST00000552089 LINC00308Q8TCZ7 52 aa8.08□□□□□ -1.12
RBFOX1-214ENST00000552089 NBDYA0A0U1RRE5 68 aa8.07□□□□□ -1.12
RBFOX1-214ENST00000552089 ANGP03950 147 aaKnown RBP8.07□□□□□ -1.12
RBFOX1-214ENST00000552089 ADAMTSL4-AS1Q5T5F5 129 aa8.07□□□□□ -1.12
RBFOX1-214ENST00000552089 FAT3Q8TDW7 4589 aa8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms