RNA–Protein interactions for RNA: ENST00000551216.2

SCN8A-207, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

TSL 1 (best)

Gene SCN8A, Length 1,627 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-207ENST00000551216 KLK5Q9Y337 293 aaPredicted RBP9.87□□□□□ -0.83
SCN8A-207ENST00000551216 K7EIL1 84 aa9.86□□□□□ -0.83
SCN8A-207ENST00000551216 M0QXV9 152 aa9.86□□□□□ -0.83
SCN8A-207ENST00000551216 CKS1BP61024 79 aa9.86□□□□□ -0.83
SCN8A-207ENST00000551216 FOXI1Q12951 378 aa9.86□□□□□ -0.83
SCN8A-207ENST00000551216 C15orf53Q8NAA6 179 aa9.86□□□□□ -0.83
SCN8A-207ENST00000551216 PKD1L1Q8TDX9 2849 aa9.86□□□□□ -0.83
SCN8A-207ENST00000551216 TRAV10A0A0B4J240 114 aa9.85□□□□□ -0.83
SCN8A-207ENST00000551216 LINC00158P58513 81 aa9.85□□□□□ -0.83
SCN8A-207ENST00000551216 NPC2P61916 151 aa9.85□□□□□ -0.83
SCN8A-207ENST00000551216 CFAP161Q6P656 301 aa9.85□□□□□ -0.83
SCN8A-207ENST00000551216 SOSTDC1Q6X4U4 206 aa9.85□□□□□ -0.83
SCN8A-207ENST00000551216 MIR7-3HGQ8N6C7 128 aa9.85□□□□□ -0.83
SCN8A-207ENST00000551216 TRAV13-2A0A0B4J235 113 aa9.85□□□□□ -0.83
SCN8A-207ENST00000551216 TCL1BO95988 128 aa9.85□□□□□ -0.83
SCN8A-207ENST00000551216 CRPP02741 224 aa9.85□□□□□ -0.83
SCN8A-207ENST00000551216 NANOS2P60321 138 aaKnown RBP9.85□□□□□ -0.83
SCN8A-207ENST00000551216 KIAA0087Q14695 138 aa9.85□□□□□ -0.83
SCN8A-207ENST00000551216 KLK12Q9UKR0 248 aa9.85□□□□□ -0.83
SCN8A-207ENST00000551216 RPL13AP40429 203 aaKnown RBP9.84□□□□□ -0.83
SCN8A-207ENST00000551216 ATXN8Q156A1 80 aa9.84□□□□□ -0.83
SCN8A-207ENST00000551216 A0A0U1RRA0 63 aa9.83□□□□□ -0.84
SCN8A-207ENST00000551216 TRIAP1O43715 76 aa9.83□□□□□ -0.84
SCN8A-207ENST00000551216 ENHOQ6UWT2 76 aa9.83□□□□□ -0.84
SCN8A-207ENST00000551216 Q8N3U1 123 aa9.83□□□□□ -0.84
SCN8A-207ENST00000551216 LINC01600Q96MT4 127 aa9.83□□□□□ -0.84
SCN8A-207ENST00000551216 DNAH3Q8TD57 4116 aa9.82□□□□□ -0.84
SCN8A-207ENST00000551216 H7C2G1 150 aa9.82□□□□□ -0.84
SCN8A-207ENST00000551216 LINC01556Q5JQF7 62 aa9.82□□□□□ -0.84
SCN8A-207ENST00000551216 SND1-IT1Q9HBX3 110 aa9.82□□□□□ -0.84
SCN8A-207ENST00000551216 IGLV10-54A0A075B6I4 117 aa9.82□□□□□ -0.84
SCN8A-207ENST00000551216 GAGE12HA6NDE8 117 aa9.82□□□□□ -0.84
SCN8A-207ENST00000551216 ESRGQ1W209 222 aa9.82□□□□□ -0.84
SCN8A-207ENST00000551216 CMYA5Q8N3K9 4069 aa9.81□□□□□ -0.84
SCN8A-207ENST00000551216 J3QR89 54 aa9.81□□□□□ -0.84
SCN8A-207ENST00000551216 WFDC2Q14508 124 aa9.81□□□□□ -0.84
SCN8A-207ENST00000551216 DEFB121Q5J5C9 76 aa9.81□□□□□ -0.84
SCN8A-207ENST00000551216 WFDC10BQ8IUB3 73 aa9.8□□□□□ -0.84
SCN8A-207ENST00000551216 CCL18P55774 89 aa9.79□□□□□ -0.84
SCN8A-207ENST00000551216 GVQW2A0A096LPI5 108 aaPredicted RBP9.78□□□□□ -0.84
SCN8A-207ENST00000551216 PFN2P35080 140 aa9.78□□□□□ -0.84
SCN8A-207ENST00000551216 UBE2WQ96B02 151 aa9.78□□□□□ -0.84
SCN8A-207ENST00000551216 F8WDY8 70 aa9.78□□□□□ -0.84
SCN8A-207ENST00000551216 NDUFC2O95298 119 aa9.78□□□□□ -0.84
SCN8A-207ENST00000551216 DNAH10OSP0CZ25 163 aa9.78□□□□□ -0.84
SCN8A-207ENST00000551216 SPAG11BQ08648 103 aa9.78□□□□□ -0.84
SCN8A-207ENST00000551216 RPL28P46779 137 aaKnown RBP9.77□□□□□ -0.85
SCN8A-207ENST00000551216 ETDBQ3ZM63 59 aa9.77□□□□□ -0.85
SCN8A-207ENST00000551216 LINC01620Q4KN68 170 aa9.77□□□□□ -0.85
SCN8A-207ENST00000551216 C2orf82Q6UX34 121 aa9.77□□□□□ -0.85
SCN8A-207ENST00000551216 LST1O00453 97 aa9.76□□□□□ -0.85
SCN8A-207ENST00000551216 SMCPP49901 116 aaPredicted RBP9.76□□□□□ -0.85
SCN8A-207ENST00000551216 IGKV2-28A0A075B6P5 120 aa9.75□□□□□ -0.85
SCN8A-207ENST00000551216 SLC25A20O43772 301 aa9.75□□□□□ -0.85
SCN8A-207ENST00000551216 IGKV2D-28P01615 120 aa9.75□□□□□ -0.85
SCN8A-207ENST00000551216 PRB2P02812 416 aaPredicted RBP9.75□□□□□ -0.85
SCN8A-207ENST00000551216 TEN1Q86WV5 123 aa9.75□□□□□ -0.85
SCN8A-207ENST00000551216 TRBV10-2A0A0K0K1G8 114 aa9.74□□□□□ -0.85
SCN8A-207ENST00000551216 KRTAP26-1Q6PEX3 210 aa9.74□□□□□ -0.85
SCN8A-207ENST00000551216 MDFIQ99750 246 aa9.74□□□□□ -0.85
SCN8A-207ENST00000551216 NOTCH1P46531 2555 aa9.74□□□□□ -0.85
SCN8A-207ENST00000551216 C9JAW5 83 aa9.74□□□□□ -0.85
SCN8A-207ENST00000551216 ANK2Q01484 3957 aa9.74□□□□□ -0.85
SCN8A-207ENST00000551216 LINC00337Q8N6G1 96 aa9.74□□□□□ -0.85
SCN8A-207ENST00000551216 MRAPQ8TCY5 172 aa9.74□□□□□ -0.85
SCN8A-207ENST00000551216 NTN5Q8WTR8 489 aaPredicted RBP9.74□□□□□ -0.85
SCN8A-207ENST00000551216 CARD19Q96LW7 228 aa9.74□□□□□ -0.85
SCN8A-207ENST00000551216 C1orf43Q9BWL3 253 aa9.74□□□□□ -0.85
SCN8A-207ENST00000551216 TENM3Q9P273 2699 aa9.73□□□□□ -0.85
SCN8A-207ENST00000551216 H3BT86 120 aa9.73□□□□□ -0.85
SCN8A-207ENST00000551216 ANKRD29Q8N6D5 301 aa9.73□□□□□ -0.85
SCN8A-207ENST00000551216 CBY1Q9Y3M2 126 aa9.73□□□□□ -0.85
SCN8A-207ENST00000551216 C2orf48Q96LS8 159 aa9.72□□□□□ -0.85
SCN8A-207ENST00000551216 UPK3BQ9BT76 320 aa9.72□□□□□ -0.85
SCN8A-207ENST00000551216 H0YGX0 51 aa9.71□□□□□ -0.85
SCN8A-207ENST00000551216 TRACP01848 142 aa9.71□□□□□ -0.85
SCN8A-207ENST00000551216 MTURNQ8N3F0 131 aa9.71□□□□□ -0.85
SCN8A-207ENST00000551216 PPDPFLQ8WWR9 84 aa9.71□□□□□ -0.85
SCN8A-207ENST00000551216 B9D2Q9BPU9 175 aa9.71□□□□□ -0.85
SCN8A-207ENST00000551216 NBEAL1Q6ZS30 2694 aa9.71□□□□□ -0.85
SCN8A-207ENST00000551216 ZNF561-AS1K7EIQ3 104 aa9.7□□□□□ -0.86
SCN8A-207ENST00000551216 UNQ6190/PRO20217Q6UXQ8 127 aa9.7□□□□□ -0.86
SCN8A-207ENST00000551216 VPS25Q9BRG1 176 aa9.69□□□□□ -0.86
SCN8A-207ENST00000551216 CLEC2BQ92478 149 aa9.68□□□□□ -0.86
SCN8A-207ENST00000551216 TMEM126AQ9H061 195 aa9.68□□□□□ -0.86
SCN8A-207ENST00000551216 LINC00588Q9Y4M8 146 aa9.68□□□□□ -0.86
SCN8A-207ENST00000551216 RNF151Q2KHN1 245 aa9.67□□□□□ -0.86
SCN8A-207ENST00000551216 RMI2Q96E14 147 aa9.67□□□□□ -0.86
SCN8A-207ENST00000551216 NHLRC4P0CG21 123 aaPredicted RBP9.67□□□□□ -0.86
SCN8A-207ENST00000551216 C10orf25Q5T742 122 aa9.67□□□□□ -0.86
SCN8A-207ENST00000551216 C6orf223Q8N319 242 aa9.67□□□□□ -0.86
SCN8A-207ENST00000551216 SMIM11BQ8TCY0 68 aa9.67□□□□□ -0.86
SCN8A-207ENST00000551216 MGAM2Q2M2H8 2515 aa9.66□□□□□ -0.86
SCN8A-207ENST00000551216 IGKV2D-24A0A075B6R9 120 aa9.65□□□□□ -0.86
SCN8A-207ENST00000551216 C9orf116Q5BN46 136 aaPredicted RBP9.65□□□□□ -0.86
SCN8A-207ENST00000551216 C15orf56Q8N910 161 aa9.65□□□□□ -0.86
SCN8A-207ENST00000551216 CAMK2N2Q96S95 79 aa9.65□□□□□ -0.86
SCN8A-207ENST00000551216 C6orf48Q9UBA6 75 aa9.65□□□□□ -0.86
SCN8A-207ENST00000551216 OR13C6PQ8NH95 151 aa9.64□□□□□ -0.87
SCN8A-207ENST00000551216 A0A1B0GX51 115 aa9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms