RNA–Protein interactions for RNA: ENST00000550800.6

TMEM116-212, Transcript of transmembrane protein 116, humanhuman

APPRIS ALT2 TSL 3

Gene TMEM116, Length 718 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-212ENST00000550800 CXCL17Q6UXB2 119 aa3.59□□□□□ -1.83
TMEM116-212ENST00000550800 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa3.59□□□□□ -1.83
TMEM116-212ENST00000550800 ZNF843Q8N446 348 aa3.59□□□□□ -1.83
TMEM116-212ENST00000550800 KCNQ1DNQ9H478 68 aa3.59□□□□□ -1.83
TMEM116-212ENST00000550800 C11orf21Q9P2W6 132 aa3.59□□□□□ -1.83
TMEM116-212ENST00000550800 CCL26Q9Y258 94 aa3.59□□□□□ -1.83
TMEM116-212ENST00000550800 LINC01558Q9Y6Z2 57 aa3.59□□□□□ -1.83
TMEM116-212ENST00000550800 ITPR3Q14573 2671 aa3.58□□□□□ -1.84
TMEM116-212ENST00000550800 RP1P56715 2156 aa3.58□□□□□ -1.84
TMEM116-212ENST00000550800 RELNP78509 3460 aa3.58□□□□□ -1.84
TMEM116-212ENST00000550800 ACACAQ13085 2346 aa3.58□□□□□ -1.84
TMEM116-212ENST00000550800 IGHV3-16A0A0C4DH30 117 aa3.58□□□□□ -1.84
TMEM116-212ENST00000550800 SMIM1B2RUZ4 78 aa3.58□□□□□ -1.84
TMEM116-212ENST00000550800 K7EQD1 137 aa3.58□□□□□ -1.84
TMEM116-212ENST00000550800 K7EQG2 157 aa3.58□□□□□ -1.84
TMEM116-212ENST00000550800 RNASE3P12724 160 aaKnown RBP3.58□□□□□ -1.84
TMEM116-212ENST00000550800 CNBPP62633 177 aaKnown RBP3.58□□□□□ -1.84
TMEM116-212ENST00000550800 ATP1A1-AS1Q5TC04 95 aa3.58□□□□□ -1.84
TMEM116-212ENST00000550800 IGFL3Q6UXB1 125 aa3.58□□□□□ -1.84
TMEM116-212ENST00000550800 C18orf65Q6ZTR6 163 aa3.58□□□□□ -1.84
TMEM116-212ENST00000550800 ZFAND2AQ8N6M9 145 aa3.58□□□□□ -1.84
TMEM116-212ENST00000550800 IGHV3-21A0A0B4J1V1 117 aa3.57□□□□□ -1.84
TMEM116-212ENST00000550800 NDUFA4O00483 81 aa3.57□□□□□ -1.84
TMEM116-212ENST00000550800 LINC01565O15544 149 aa3.57□□□□□ -1.84
TMEM116-212ENST00000550800 UBR5O95071 2799 aaPredicted RBP3.57□□□□□ -1.84
TMEM116-212ENST00000550800 IGKV4-1P06312 121 aa3.57□□□□□ -1.84
TMEM116-212ENST00000550800 MOBPQ13875 183 aa3.57□□□□□ -1.84
TMEM116-212ENST00000550800 FREM1Q5H8C1 2179 aa3.57□□□□□ -1.84
TMEM116-212ENST00000550800 NPBQ8NG41 125 aa3.57□□□□□ -1.84
TMEM116-212ENST00000550800 COX7B2Q8TF08 81 aa3.57□□□□□ -1.84
TMEM116-212ENST00000550800 ZNF702PQ9H963 129 aa3.57□□□□□ -1.84
TMEM116-212ENST00000550800 CDKN2A-AS1Q9UH64 79 aa3.57□□□□□ -1.84
TMEM116-212ENST00000550800 TNCP24821 2201 aa3.56□□□□□ -1.84
TMEM116-212ENST00000550800 MALRD1Q5VYJ5 2156 aa3.56□□□□□ -1.84
TMEM116-212ENST00000550800 IGKV2-28A0A075B6P5 120 aa3.56□□□□□ -1.84
TMEM116-212ENST00000550800 IGHV3-38A0A0C4DH36 116 aa3.56□□□□□ -1.84
TMEM116-212ENST00000550800 C10orf142B7Z368 130 aa3.56□□□□□ -1.84
TMEM116-212ENST00000550800 IGKV2D-28P01615 120 aa3.56□□□□□ -1.84
TMEM116-212ENST00000550800 NDPQ00604 133 aa3.56□□□□□ -1.84
TMEM116-212ENST00000550800 HIGD2BQ4VC39 106 aa3.56□□□□□ -1.84
TMEM116-212ENST00000550800 Q6ZSV7 163 aa3.56□□□□□ -1.84
TMEM116-212ENST00000550800 KRTAP9-8Q9BYQ0 159 aa3.56□□□□□ -1.84
TMEM116-212ENST00000550800 KRTAP4-11Q9BYQ6 195 aa3.56□□□□□ -1.84
TMEM116-212ENST00000550800 KRTAP4-5Q9BYR2 181 aa3.56□□□□□ -1.84
TMEM116-212ENST00000550800 WFDC10AQ9H1F0 79 aa3.56□□□□□ -1.84
TMEM116-212ENST00000550800 MAP6D1Q9H9H5 199 aa3.56□□□□□ -1.84
TMEM116-212ENST00000550800 KAAG1Q9UBP8 84 aa3.56□□□□□ -1.84
TMEM116-212ENST00000550800 ARHGAP32A7KAX9 2087 aa3.56□□□□□ -1.84
TMEM116-212ENST00000550800 NOTCH2Q04721 2471 aa3.55□□□□□ -1.84
TMEM116-212ENST00000550800 CREBBPQ92793 2442 aa3.55□□□□□ -1.84
TMEM116-212ENST00000550800 IGLV3-9A0A075B6K5 115 aa3.55□□□□□ -1.84
TMEM116-212ENST00000550800 IGHV4-30-2A0A087WSY4 118 aa3.55□□□□□ -1.84
TMEM116-212ENST00000550800 A0A0A0MQY5 61 aa3.55□□□□□ -1.84
TMEM116-212ENST00000550800 IGHV7-81A0A0B4J1V7 117 aa3.55□□□□□ -1.84
TMEM116-212ENST00000550800 IGHV3-72A0A0B4J1Y9 119 aa3.55□□□□□ -1.84
TMEM116-212ENST00000550800 IGLV1-44P01699 117 aa3.55□□□□□ -1.84
TMEM116-212ENST00000550800 MRGPRG-AS1Q2M3A8 158 aa3.55□□□□□ -1.84
TMEM116-212ENST00000550800 C10orf55Q5SWW7 151 aa3.55□□□□□ -1.84
TMEM116-212ENST00000550800 LINC00575Q6W349 94 aa3.55□□□□□ -1.84
TMEM116-212ENST00000550800 GAFA1Q96PS6 74 aa3.55□□□□□ -1.84
TMEM116-212ENST00000550800 C2CD3Q4AC94 2353 aa3.55□□□□□ -1.84
TMEM116-212ENST00000550800 SDK1Q7Z5N4 2213 aa3.55□□□□□ -1.84
TMEM116-212ENST00000550800 ATMQ13315 3056 aa3.55□□□□□ -1.84
TMEM116-212ENST00000550800 CACNA1DQ01668 2161 aa3.54□□□□□ -1.84
TMEM116-212ENST00000550800 IGKV2D-29A0A075B6S2 120 aaPredicted RBP3.54□□□□□ -1.84
TMEM116-212ENST00000550800 CDK2AP2O75956 126 aa3.54□□□□□ -1.84
TMEM116-212ENST00000550800 IGHV3-48P01763 117 aa3.54□□□□□ -1.84
TMEM116-212ENST00000550800 IGHV3-53P01767 116 aa3.54□□□□□ -1.84
TMEM116-212ENST00000550800 MSMBP08118 114 aa3.54□□□□□ -1.84
TMEM116-212ENST00000550800 CCL3P10147 92 aa3.54□□□□□ -1.84
TMEM116-212ENST00000550800 IGHV1-2P23083 117 aa3.54□□□□□ -1.84
TMEM116-212ENST00000550800 MRPS21P82921 87 aaKnown RBP3.54□□□□□ -1.84
TMEM116-212ENST00000550800 SPAG11BQ08648 103 aa3.54□□□□□ -1.84
TMEM116-212ENST00000550800 ZNRF1Q8ND25 227 aa3.54□□□□□ -1.84
TMEM116-212ENST00000550800 PLAC8Q9NZF1 115 aa3.54□□□□□ -1.84
TMEM116-212ENST00000550800 COL6A6A6NMZ7 2263 aa3.54□□□□□ -1.84
TMEM116-212ENST00000550800 APC2O95996 2303 aa3.53□□□□□ -1.84
TMEM116-212ENST00000550800 URB1O60287 2271 aaKnown RBP3.53□□□□□ -1.84
TMEM116-212ENST00000550800 NBPF19A0A087WUL8 3843 aa3.53□□□□□ -1.84
TMEM116-212ENST00000550800 H0Y9P7 68 aa3.53□□□□□ -1.84
TMEM116-212ENST00000550800 IGHV1-46P01743 117 aa3.53□□□□□ -1.84
TMEM116-212ENST00000550800 IGHV4-59P01825 116 aa3.53□□□□□ -1.84
TMEM116-212ENST00000550800 ZFP36P26651 326 aaKnown RBP3.53□□□□□ -1.84
TMEM116-212ENST00000550800 CCL18P55774 89 aa3.53□□□□□ -1.84
TMEM116-212ENST00000550800 LMO4P61968 165 aa3.53□□□□□ -1.84
TMEM116-212ENST00000550800 C9orf129Q5T035 196 aaKnown RBP3.53□□□□□ -1.84
TMEM116-212ENST00000550800 LINC00242Q5T6M2 205 aa3.53□□□□□ -1.84
TMEM116-212ENST00000550800 ZNF706Q9Y5V0 76 aaPredicted RBP3.53□□□□□ -1.84
TMEM116-212ENST00000550800 S4R3C0 116 aa3.53□□□□□ -1.84
TMEM116-212ENST00000550800 IGHV3OR16-13A0A075B7E8 117 aa3.52□□□□□ -1.85
TMEM116-212ENST00000550800 IGLV1-47P01700 117 aa3.52□□□□□ -1.85
TMEM116-212ENST00000550800 IGHV1-8P0DP01 117 aa3.52□□□□□ -1.85
TMEM116-212ENST00000550800 LINC00158P58513 81 aa3.52□□□□□ -1.85
TMEM116-212ENST00000550800 NANOS2P60321 138 aaKnown RBP3.52□□□□□ -1.85
TMEM116-212ENST00000550800 SEC61BP60468 96 aaKnown RBP3.52□□□□□ -1.85
TMEM116-212ENST00000550800 KPRPQ5T749 579 aaPredicted RBP3.52□□□□□ -1.85
TMEM116-212ENST00000550800 CHCHD7Q9BUK0 85 aa3.52□□□□□ -1.85
TMEM116-212ENST00000550800 FBN2P35556 2912 aa3.52□□□□□ -1.85
TMEM116-212ENST00000550800 NAV3Q8IVL0 2385 aa3.52□□□□□ -1.85
TMEM116-212ENST00000550800 ZFHX3Q15911 3703 aa3.52□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms