RNA–Protein interactions for RNA: ENST00000550519.5

SMARCC2-210, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2, humanhuman

TSL 3

Gene SMARCC2, Length 789 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2-210ENST00000550519 CTDSP1Q9GZU7 261 aa12.86□□□□□ -0.35
SMARCC2-210ENST00000550519 HERVK_113P63121 156 aa12.85□□□□□ -0.35
SMARCC2-210ENST00000550519 TP73-AS1Q9UF72 201 aa12.85□□□□□ -0.35
SMARCC2-210ENST00000550519 CDKN2A-AS1Q9UH64 79 aa12.85□□□□□ -0.35
SMARCC2-210ENST00000550519 F8VRH5 84 aa12.84□□□□□ -0.35
SMARCC2-210ENST00000550519 SEC11AP67812 179 aa12.84□□□□□ -0.35
SMARCC2-210ENST00000550519 MRPL55Q7Z7F7 128 aaKnown RBP12.83□□□□□ -0.36
SMARCC2-210ENST00000550519 PNRC1Q12796 327 aaPredicted RBP12.82□□□□□ -0.36
SMARCC2-210ENST00000550519 PAPPA-AS1Q5QFB9 102 aa12.82□□□□□ -0.36
SMARCC2-210ENST00000550519 ANAPC16Q96DE5 110 aa12.82□□□□□ -0.36
SMARCC2-210ENST00000550519 NXT2Q9NPJ8 142 aaKnown RBP12.82□□□□□ -0.36
SMARCC2-210ENST00000550519 TIMM17AQ99595 171 aa12.81□□□□□ -0.36
SMARCC2-210ENST00000550519 A0A087X002 238 aa12.8□□□□□ -0.36
SMARCC2-210ENST00000550519 BCE1O60756 84 aa12.8□□□□□ -0.36
SMARCC2-210ENST00000550519 TSPAN13O95857 204 aa12.8□□□□□ -0.36
SMARCC2-210ENST00000550519 MT-ND4LP03901 98 aa12.8□□□□□ -0.36
SMARCC2-210ENST00000550519 RPL28P46779 137 aaKnown RBP12.8□□□□□ -0.36
SMARCC2-210ENST00000550519 GEMIN7Q9H840 131 aaKnown RBP12.8□□□□□ -0.36
SMARCC2-210ENST00000550519 CXCL5P42830 114 aa12.79□□□□□ -0.36
SMARCC2-210ENST00000550519 G0S2P27469 103 aa12.78□□□□□ -0.36
SMARCC2-210ENST00000550519 TOMM6Q96B49 74 aa12.78□□□□□ -0.36
SMARCC2-210ENST00000550519 SMIM1B2RUZ4 78 aa12.76□□□□□ -0.37
SMARCC2-210ENST00000550519 CRYGAP11844 174 aa12.76□□□□□ -0.37
SMARCC2-210ENST00000550519 LINC00167Q96N53 147 aa12.76□□□□□ -0.37
SMARCC2-210ENST00000550519 RPL37AP8A6NKH3 93 aa12.74□□□□□ -0.37
SMARCC2-210ENST00000550519 ERASQ7Z444 233 aa12.74□□□□□ -0.37
SMARCC2-210ENST00000550519 TYMSOSQ8TAI1 123 aa12.74□□□□□ -0.37
SMARCC2-210ENST00000550519 PDZD11Q5EBL8 140 aa12.73□□□□□ -0.37
SMARCC2-210ENST00000550519 IGLV5-45A0A087WSX0 123 aa12.72□□□□□ -0.37
SMARCC2-210ENST00000550519 A0A0U1RQV1 116 aa12.72□□□□□ -0.37
SMARCC2-210ENST00000550519 TINCRA0A1B0GVN0 87 aa12.72□□□□□ -0.37
SMARCC2-210ENST00000550519 COX7B2Q8TF08 81 aa12.72□□□□□ -0.37
SMARCC2-210ENST00000550519 IGLV5-37A0A075B6J1 123 aa12.71□□□□□ -0.37
SMARCC2-210ENST00000550519 KRTAP13-1Q8IUC0 172 aa12.71□□□□□ -0.37
SMARCC2-210ENST00000550519 SCGB3A1Q96QR1 104 aa12.71□□□□□ -0.37
SMARCC2-210ENST00000550519 ADCYAP1P18509 176 aa12.7□□□□□ -0.38
SMARCC2-210ENST00000550519 ANAPC11Q9NYG5 84 aa12.7□□□□□ -0.38
SMARCC2-210ENST00000550519 GAGE10A6NGK3 116 aa12.69□□□□□ -0.38
SMARCC2-210ENST00000550519 KIAA1644Q3SXP7 199 aa12.69□□□□□ -0.38
SMARCC2-210ENST00000550519 KRTAP13-2Q52LG2 175 aa12.68□□□□□ -0.38
SMARCC2-210ENST00000550519 RAB5BP61020 215 aa12.66□□□□□ -0.38
SMARCC2-210ENST00000550519 CST9LQ9H4G1 147 aa12.66□□□□□ -0.38
SMARCC2-210ENST00000550519 LINC01546A6NGU7 62 aa12.65□□□□□ -0.38
SMARCC2-210ENST00000550519 LINC01549A6NIU2 74 aa12.65□□□□□ -0.38
SMARCC2-210ENST00000550519 SPINK8P0C7L1 97 aa12.65□□□□□ -0.38
SMARCC2-210ENST00000550519 UBE2AP49459 152 aa12.65□□□□□ -0.38
SMARCC2-210ENST00000550519 NKAPP1Q8N9T2 125 aa12.65□□□□□ -0.38
SMARCC2-210ENST00000550519 FAM229BQ4G0N7 80 aa12.64□□□□□ -0.39
SMARCC2-210ENST00000550519 RAB14P61106 215 aa12.62□□□□□ -0.39
SMARCC2-210ENST00000550519 TRAV9-1A0A075B6T8 112 aa12.61□□□□□ -0.39
SMARCC2-210ENST00000550519 PMVKQ15126 192 aa12.61□□□□□ -0.39
SMARCC2-210ENST00000550519 MRPL18Q9H0U6 180 aaKnown RBP12.61□□□□□ -0.39
SMARCC2-210ENST00000550519 IGKV2-28A0A075B6P5 120 aa12.6□□□□□ -0.39
SMARCC2-210ENST00000550519 SCO1O75880 301 aa12.6□□□□□ -0.39
SMARCC2-210ENST00000550519 IGKV2D-28P01615 120 aa12.6□□□□□ -0.39
SMARCC2-210ENST00000550519 LCE2AQ5TA79 106 aaPredicted RBP12.6□□□□□ -0.39
SMARCC2-210ENST00000550519 LINC00304Q8N9R0 145 aa12.6□□□□□ -0.39
SMARCC2-210ENST00000550519 RETNLBQ9BQ08 111 aa12.6□□□□□ -0.39
SMARCC2-210ENST00000550519 ATP5LO75964 103 aa12.59□□□□□ -0.39
SMARCC2-210ENST00000550519 KRTAP9-2Q9BYQ4 174 aa12.59□□□□□ -0.39
SMARCC2-210ENST00000550519 GNB1LQ9BYB4 327 aa12.58□□□□□ -0.4
SMARCC2-210ENST00000550519 FAT4Q6V0I7 4981 aa12.58□□□□□ -0.4
SMARCC2-210ENST00000550519 H3BRM9 83 aa12.57□□□□□ -0.4
SMARCC2-210ENST00000550519 IGLV5-39A0A0G2JS06 123 aa12.56□□□□□ -0.4
SMARCC2-210ENST00000550519 VPREB1P12018 145 aa12.56□□□□□ -0.4
SMARCC2-210ENST00000550519 PFN2P35080 140 aa12.56□□□□□ -0.4
SMARCC2-210ENST00000550519 IGKV2D-26A0A0A0MRZ7 120 aa12.55□□□□□ -0.4
SMARCC2-210ENST00000550519 CTAG1AP78358 180 aa12.55□□□□□ -0.4
SMARCC2-210ENST00000550519 PRLHP81277 87 aa12.55□□□□□ -0.4
SMARCC2-210ENST00000550519 IGLC3P0DOY3 106 aa12.54□□□□□ -0.4
SMARCC2-210ENST00000550519 TPRXLQ17RH7 258 aa12.54□□□□□ -0.4
SMARCC2-210ENST00000550519 TMEM126AQ9H061 195 aa12.54□□□□□ -0.4
SMARCC2-210ENST00000550519 CLLU1Q5K131 121 aa12.53□□□□□ -0.4
SMARCC2-210ENST00000550519 FA2HQ7L5A8 372 aa12.53□□□□□ -0.4
SMARCC2-210ENST00000550519 SND1-IT1Q9HBX3 110 aa12.53□□□□□ -0.4
SMARCC2-210ENST00000550519 TMEM238C9JI98 176 aa12.52□□□□□ -0.41
SMARCC2-210ENST00000550519 FAM19A1Q7Z5A9 133 aa12.52□□□□□ -0.41
SMARCC2-210ENST00000550519 ERG28Q9UKR5 140 aa12.52□□□□□ -0.41
SMARCC2-210ENST00000550519 TMEM218A2RU14 115 aa12.51□□□□□ -0.41
SMARCC2-210ENST00000550519 CDIP1Q9H305 208 aa12.51□□□□□ -0.41
SMARCC2-210ENST00000550519 SMCO4Q9NRQ5 59 aa12.51□□□□□ -0.41
SMARCC2-210ENST00000550519 IGLV7-46A0A075B6I9 117 aa12.5□□□□□ -0.41
SMARCC2-210ENST00000550519 M0R378 163 aa12.5□□□□□ -0.41
SMARCC2-210ENST00000550519 ZNF22P17026 224 aaPredicted RBP12.5□□□□□ -0.41
SMARCC2-210ENST00000550519 S100PP25815 95 aa12.5□□□□□ -0.41
SMARCC2-210ENST00000550519 RPL24P83731 157 aaKnown RBP12.5□□□□□ -0.41
SMARCC2-210ENST00000550519 COX17Q14061 63 aa12.5□□□□□ -0.41
SMARCC2-210ENST00000550519 PLEKHB2Q96CS7 222 aa12.5□□□□□ -0.41
SMARCC2-210ENST00000550519 COX19Q49B96 90 aa12.49□□□□□ -0.41
SMARCC2-210ENST00000550519 UQCC3Q6UW78 93 aa12.49□□□□□ -0.41
SMARCC2-210ENST00000550519 Q8NDZ9 215 aa12.49□□□□□ -0.41
SMARCC2-210ENST00000550519 MUC17Q685J3 4493 aa12.49□□□□□ -0.41
SMARCC2-210ENST00000550519 A0A096LNJ9 63 aa12.48□□□□□ -0.41
SMARCC2-210ENST00000550519 FABP9Q0Z7S8 132 aa12.47□□□□□ -0.41
SMARCC2-210ENST00000550519 NDUFA6P56556 154 aa12.46□□□□□ -0.41
SMARCC2-210ENST00000550519 C3orf22Q8N5N4 141 aa12.46□□□□□ -0.41
SMARCC2-210ENST00000550519 ZNF625Q96I27 306 aaPredicted RBP12.46□□□□□ -0.41
SMARCC2-210ENST00000550519 CBLN2Q8IUK8 224 aa12.45□□□□□ -0.42
SMARCC2-210ENST00000550519 SEC11CQ9BY50 192 aa12.44□□□□□ -0.42
SMARCC2-210ENST00000550519 URB1-AS1Q96HZ7 61 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 102 ms