RNA–Protein interactions for RNA: ENST00000548771.1

CCDC38-206, Transcript of coiled-coil domain containing 38, humanhuman

TSL 3

Gene CCDC38, Length 470 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-206ENST00000548771 NDUFA3O95167 84 aa-0.09□□□□□ -2.42
CCDC38-206ENST00000548771 RBP4P02753 201 aa-0.09□□□□□ -2.42
CCDC38-206ENST00000548771 SFTA3P0C7M3 94 aa-0.09□□□□□ -2.42
CCDC38-206ENST00000548771 LINC00694P0DN24 101 aa-0.09□□□□□ -2.42
CCDC38-206ENST00000548771 BCL2P10415 239 aa-0.09□□□□□ -2.42
CCDC38-206ENST00000548771 SRP9P49458 86 aaKnown RBP-0.09□□□□□ -2.42
CCDC38-206ENST00000548771 GNG10P50151 68 aa-0.09□□□□□ -2.42
CCDC38-206ENST00000548771 MRPS15P82914 257 aaKnown RBP-0.09□□□□□ -2.42
CCDC38-206ENST00000548771 SARNPP82979 210 aaKnown RBP-0.09□□□□□ -2.42
CCDC38-206ENST00000548771 RPL19P84098 196 aaKnown RBP-0.09□□□□□ -2.42
CCDC38-206ENST00000548771 KLKP1Q107X0 134 aa-0.09□□□□□ -2.42
CCDC38-206ENST00000548771 GLYATL3Q5SZD4 288 aa-0.09□□□□□ -2.42
CCDC38-206ENST00000548771 C3orf33Q6P1S2 294 aa-0.09□□□□□ -2.42
CCDC38-206ENST00000548771 UNQ5815/PRO19632Q6UWF5 114 aa-0.09□□□□□ -2.42
CCDC38-206ENST00000548771 ARL17AQ8IVW1 177 aa-0.09□□□□□ -2.42
CCDC38-206ENST00000548771 C4orf33Q8N1A6 199 aa-0.09□□□□□ -2.42
CCDC38-206ENST00000548771 LINC00269Q8N2A0 174 aa-0.09□□□□□ -2.42
CCDC38-206ENST00000548771 VSTM2AQ8TAG5 236 aa-0.09□□□□□ -2.42
CCDC38-206ENST00000548771 AP1S3Q96PC3 154 aa-0.09□□□□□ -2.42
CCDC38-206ENST00000548771 MCEEQ96PE7 176 aa-0.09□□□□□ -2.42
CCDC38-206ENST00000548771 OR2H1Q9GZK4 316 aa-0.09□□□□□ -2.42
CCDC38-206ENST00000548771 SH3BGRL3Q9H299 93 aa-0.09□□□□□ -2.42
CCDC38-206ENST00000548771 SMPXQ9UHP9 88 aa-0.09□□□□□ -2.42
CCDC38-206ENST00000548771 UBE2D4Q9Y2X8 147 aa-0.09□□□□□ -2.42
CCDC38-206ENST00000548771 A0A087WVE0 104 aa-0.1□□□□□ -2.43
CCDC38-206ENST00000548771 FXYD6-FXYD2A0A087WZ82 144 aa-0.1□□□□□ -2.43
CCDC38-206ENST00000548771 TMEM210A6NLX4 147 aa-0.1□□□□□ -2.43
CCDC38-206ENST00000548771 TMEM14DPA8MWL7 114 aa-0.1□□□□□ -2.43
CCDC38-206ENST00000548771 OOSP1A8MZH6 123 aa-0.1□□□□□ -2.43
CCDC38-206ENST00000548771 K7EP13 123 aa-0.1□□□□□ -2.43
CCDC38-206ENST00000548771 SPINK4O60575 86 aa-0.1□□□□□ -2.43
CCDC38-206ENST00000548771 PIAS1O75925 651 aa-0.1□□□□□ -2.43
CCDC38-206ENST00000548771 HLA-DRB4P13762 266 aa-0.1□□□□□ -2.43
CCDC38-206ENST00000548771 RPS27P42677 84 aaKnown RBP-0.1□□□□□ -2.43
CCDC38-206ENST00000548771 EDDM3BP56851 147 aa-0.1□□□□□ -2.43
CCDC38-206ENST00000548771 UBE2D3P61077 147 aa-0.1□□□□□ -2.43
CCDC38-206ENST00000548771 SNRPD3P62318 126 aaKnown RBP-0.1□□□□□ -2.43
CCDC38-206ENST00000548771 MRPS36P82909 103 aaKnown RBP-0.1□□□□□ -2.43
CCDC38-206ENST00000548771 FXYD3Q14802 87 aa-0.1□□□□□ -2.43
CCDC38-206ENST00000548771 POU6F1Q14863 301 aa-0.1□□□□□ -2.43
CCDC38-206ENST00000548771 LTC4SQ16873 150 aa-0.1□□□□□ -2.43
CCDC38-206ENST00000548771 KLK9Q2XQG4 91 aa-0.1□□□□□ -2.43
CCDC38-206ENST00000548771 TDRG1Q3Y452 100 aa-0.1□□□□□ -2.43
CCDC38-206ENST00000548771 PSMG4Q5JS54 123 aa-0.1□□□□□ -2.43
CCDC38-206ENST00000548771 C10orf128Q5T292 105 aa-0.1□□□□□ -2.43
CCDC38-206ENST00000548771 HACD4Q5VWC8 232 aa-0.1□□□□□ -2.43
CCDC38-206ENST00000548771 SLC48A1Q6P1K1 146 aa-0.1□□□□□ -2.43
CCDC38-206ENST00000548771 CLPSL2Q6UWE3 100 aa-0.1□□□□□ -2.43
CCDC38-206ENST00000548771 HRCT1Q6UXD1 115 aa-0.1□□□□□ -2.43
CCDC38-206ENST00000548771 HEPN1Q6WQI6 88 aa-0.1□□□□□ -2.43
CCDC38-206ENST00000548771 IDO2Q6ZQW0 420 aa-0.1□□□□□ -2.43
CCDC38-206ENST00000548771 OR13C6PQ8NH95 151 aa-0.1□□□□□ -2.43
CCDC38-206ENST00000548771 ATP6V0E2Q8NHE4 81 aa-0.1□□□□□ -2.43
CCDC38-206ENST00000548771 SKA2Q8WVK7 121 aaPredicted RBP-0.1□□□□□ -2.43
CCDC38-206ENST00000548771 PLEKHB2Q96CS7 222 aa-0.1□□□□□ -2.43
CCDC38-206ENST00000548771 DPH3Q96FX2 82 aa-0.1□□□□□ -2.43
CCDC38-206ENST00000548771 RHPN1-AS1Q9BWJ2 59 aa-0.1□□□□□ -2.43
CCDC38-206ENST00000548771 MRPL36Q9P0J6 103 aaKnown RBP-0.1□□□□□ -2.43
CCDC38-206ENST00000548771 SS18L2Q9UHA2 77 aa-0.1□□□□□ -2.43
CCDC38-206ENST00000548771 TIMM8BQ9Y5J9 83 aaPredicted RBP-0.1□□□□□ -2.43
CCDC38-206ENST00000548771 LINC00312Q9Y6C7 94 aa-0.1□□□□□ -2.43
CCDC38-206ENST00000548771 HLA-DRB4X5D2U9 266 aa-0.1□□□□□ -2.43
CCDC38-206ENST00000548771 GVQW2A0A096LPI5 108 aaPredicted RBP-0.11□□□□□ -2.43
CCDC38-206ENST00000548771 TRGV1A0A0A0MS02 117 aa-0.11□□□□□ -2.43
CCDC38-206ENST00000548771 TRAV2A0A0B4J234 112 aa-0.11□□□□□ -2.43
CCDC38-206ENST00000548771 C3orf85A0A1B0GTC6 90 aa-0.11□□□□□ -2.43
CCDC38-206ENST00000548771 FAM236AA0A1B0GUQ0 79 aa-0.11□□□□□ -2.43
CCDC38-206ENST00000548771 FAM236BA0A1B0GV22 79 aa-0.11□□□□□ -2.43
CCDC38-206ENST00000548771 RBAKDNA6NC62 111 aa-0.11□□□□□ -2.43
CCDC38-206ENST00000548771 A6NIN4 97 aa-0.11□□□□□ -2.43
CCDC38-206ENST00000548771 FAM223BA6NKX1 122 aa-0.11□□□□□ -2.43
CCDC38-206ENST00000548771 C5orf58C9J3I9 102 aa-0.11□□□□□ -2.43
CCDC38-206ENST00000548771 H3BUA1 57 aa-0.11□□□□□ -2.43
CCDC38-206ENST00000548771 K7EIM0 57 aa-0.11□□□□□ -2.43
CCDC38-206ENST00000548771 SPINK1P00995 79 aa-0.11□□□□□ -2.43
CCDC38-206ENST00000548771 GYPBP06028 91 aa-0.11□□□□□ -2.43
CCDC38-206ENST00000548771 TSPAN19P0C672 248 aa-0.11□□□□□ -2.43
CCDC38-206ENST00000548771 SAA2P0DJI9 122 aaPredicted RBP-0.11□□□□□ -2.43
CCDC38-206ENST00000548771 FABP4P15090 132 aa-0.11□□□□□ -2.43
CCDC38-206ENST00000548771 HTN1P15515 57 aa-0.11□□□□□ -2.43
CCDC38-206ENST00000548771 SDC4P31431 198 aa-0.11□□□□□ -2.43
CCDC38-206ENST00000548771 POLR2HP52434 150 aaKnown RBP-0.11□□□□□ -2.43
CCDC38-206ENST00000548771 PRLHP81277 87 aa-0.11□□□□□ -2.43
CCDC38-206ENST00000548771 ZNF56Q15929 161 aa-0.11□□□□□ -2.43
CCDC38-206ENST00000548771 RTL8BQ17RB0 113 aa-0.11□□□□□ -2.43
CCDC38-206ENST00000548771 RPL39P5Q59GN2 51 aa-0.11□□□□□ -2.43
CCDC38-206ENST00000548771 SPAG11AQ6PDA7 123 aa-0.11□□□□□ -2.43
CCDC38-206ENST00000548771 DHRS4L2Q6PKH6 230 aa-0.11□□□□□ -2.43
CCDC38-206ENST00000548771 TOMM20LQ6UXN7 152 aa-0.11□□□□□ -2.43
CCDC38-206ENST00000548771 COMMD6Q7Z4G1 85 aa-0.11□□□□□ -2.43
CCDC38-206ENST00000548771 FAM223AQ8IWN6 122 aa-0.11□□□□□ -2.43
CCDC38-206ENST00000548771 TTC9CQ8N5M4 171 aa-0.11□□□□□ -2.43
CCDC38-206ENST00000548771 MNS1Q8NEH6 495 aa-0.11□□□□□ -2.43
CCDC38-206ENST00000548771 NUP35Q8NFH5 326 aa-0.11□□□□□ -2.43
CCDC38-206ENST00000548771 TMEM263Q8WUH6 116 aaKnown RBP-0.11□□□□□ -2.43
CCDC38-206ENST00000548771 USMG5Q96IX5 58 aa-0.11□□□□□ -2.43
CCDC38-206ENST00000548771 SPRR4Q96PI1 79 aa-0.11□□□□□ -2.43
CCDC38-206ENST00000548771 SDF2Q99470 211 aa-0.11□□□□□ -2.43
CCDC38-206ENST00000548771 AIF1LQ9BQI0 150 aa-0.11□□□□□ -2.43
CCDC38-206ENST00000548771 RTL8AQ9BWD3 113 aa-0.11□□□□□ -2.43
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms