RNA–Protein interactions for RNA: ENST00000547417.1

CPNE8-205, Transcript of copine 8, humanhuman

TSL 2

Gene CPNE8, Length 376 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE8-205ENST00000547417 POLA1P09884 1462 aaPredicted RBP0.35□□□□□ -2.35
CPNE8-205ENST00000547417 TENM4Q6N022 2769 aa0.35□□□□□ -2.35
CPNE8-205ENST00000547417 PAPPAQ13219 1627 aa0.35□□□□□ -2.35
CPNE8-205ENST00000547417 DOPEY2Q9Y3R5 2298 aa0.35□□□□□ -2.35
CPNE8-205ENST00000547417 UQCRHLA0A096LP55 91 aa0.35□□□□□ -2.35
CPNE8-205ENST00000547417 H3BQF6 201 aa0.35□□□□□ -2.35
CPNE8-205ENST00000547417 I3L2K1 104 aa0.35□□□□□ -2.35
CPNE8-205ENST00000547417 PIGYQ3MUY2 71 aa0.35□□□□□ -2.35
CPNE8-205ENST00000547417 Q5BKY6 102 aa0.35□□□□□ -2.35
CPNE8-205ENST00000547417 LRP1Q07954 4544 aaKnown RBP0.35□□□□□ -2.35
CPNE8-205ENST00000547417 SMARCA2P51531 1590 aa0.35□□□□□ -2.35
CPNE8-205ENST00000547417 BAZ1AQ9NRL2 1556 aaPredicted RBP0.35□□□□□ -2.35
CPNE8-205ENST00000547417 URB1O60287 2271 aaKnown RBP0.35□□□□□ -2.35
CPNE8-205ENST00000547417 HUWE1Q7Z6Z7 4374 aaKnown RBP0.35□□□□□ -2.35
CPNE8-205ENST00000547417 NHSL1Q5SYE7 1610 aa0.35□□□□□ -2.35
CPNE8-205ENST00000547417 TRANK1O15050 2925 aa0.34□□□□□ -2.35
CPNE8-205ENST00000547417 DNAJC13O75165 2243 aa0.34□□□□□ -2.35
CPNE8-205ENST00000547417 KMT2AQ03164 3969 aa0.34□□□□□ -2.35
CPNE8-205ENST00000547417 SHPRHQ149N8 1683 aa0.34□□□□□ -2.35
CPNE8-205ENST00000547417 MUC5ACP98088 5654 aa0.34□□□□□ -2.35
CPNE8-205ENST00000547417 TRBV7-4A0A0J9YYF1 115 aa0.34□□□□□ -2.36
CPNE8-205ENST00000547417 HMGN3Q15651 99 aa0.34□□□□□ -2.36
CPNE8-205ENST00000547417 DEFB123Q8N688 67 aa0.34□□□□□ -2.36
CPNE8-205ENST00000547417 PTPRQQ9UMZ3 2332 aa0.34□□□□□ -2.36
CPNE8-205ENST00000547417 V9GYS6 101 aa0.34□□□□□ -2.36
CPNE8-205ENST00000547417 NSD1Q96L73 2696 aaPredicted RBP0.34□□□□□ -2.36
CPNE8-205ENST00000547417 ATP10BO94823 1461 aa0.34□□□□□ -2.36
CPNE8-205ENST00000547417 FLNCQ14315 2725 aa0.34□□□□□ -2.36
CPNE8-205ENST00000547417 ABCA2Q9BZC7 2435 aa0.34□□□□□ -2.36
CPNE8-205ENST00000547417 PKDREJQ9NTG1 2253 aa0.34□□□□□ -2.36
CPNE8-205ENST00000547417 ABCC3O15438 1527 aa0.33□□□□□ -2.36
CPNE8-205ENST00000547417 SETXQ7Z333 2677 aaKnown RBP0.33□□□□□ -2.36
CPNE8-205ENST00000547417 SETBP1Q9Y6X0 1596 aa0.33□□□□□ -2.36
CPNE8-205ENST00000547417 CEP162Q5TB80 1403 aa0.33□□□□□ -2.36
CPNE8-205ENST00000547417 FLNAP21333 2647 aaKnown RBP0.33□□□□□ -2.36
CPNE8-205ENST00000547417 A0A087WVE0 104 aa0.33□□□□□ -2.36
CPNE8-205ENST00000547417 C7orf77A4D0Y5 90 aa0.33□□□□□ -2.36
CPNE8-205ENST00000547417 SPINK1P00995 79 aa0.33□□□□□ -2.36
CPNE8-205ENST00000547417 FAUP35544 74 aaKnown RBP0.33□□□□□ -2.36
CPNE8-205ENST00000547417 FDCSPQ8NFU4 85 aa0.33□□□□□ -2.36
CPNE8-205ENST00000547417 NLRP1Q9C000 1473 aa0.33□□□□□ -2.36
CPNE8-205ENST00000547417 NRXN1Q9ULB1 1477 aa0.33□□□□□ -2.36
CPNE8-205ENST00000547417 DCHS2Q6V1P9 2916 aa0.33□□□□□ -2.36
CPNE8-205ENST00000547417 FAT4Q6V0I7 4981 aa0.32□□□□□ -2.36
CPNE8-205ENST00000547417 EDC4Q6P2E9 1401 aaKnown RBP0.32□□□□□ -2.36
CPNE8-205ENST00000547417 TARBP1Q13395 1621 aaKnown RBP0.32□□□□□ -2.36
CPNE8-205ENST00000547417 MYO3AQ8NEV4 1616 aa0.32□□□□□ -2.36
CPNE8-205ENST00000547417 USF3Q68DE3 2245 aa0.32□□□□□ -2.36
CPNE8-205ENST00000547417 H0Y9P7 68 aa0.32□□□□□ -2.36
CPNE8-205ENST00000547417 KRTAP21-1Q3LI58 79 aa0.32□□□□□ -2.36
CPNE8-205ENST00000547417 ETDBQ3ZM63 59 aa0.32□□□□□ -2.36
CPNE8-205ENST00000547417 ZNF720Q7Z2F6 126 aa0.32□□□□□ -2.36
CPNE8-205ENST00000547417 Q9H521 79 aa0.32□□□□□ -2.36
CPNE8-205ENST00000547417 CCDC141Q6ZP82 1450 aa0.32□□□□□ -2.36
CPNE8-205ENST00000547417 CACNA1AO00555 2505 aa0.32□□□□□ -2.36
CPNE8-205ENST00000547417 CUX1P39880 1505 aa0.32□□□□□ -2.36
CPNE8-205ENST00000547417 RB1CC1Q8TDY2 1594 aa0.32□□□□□ -2.36
CPNE8-205ENST00000547417 DMBT1Q9UGM3 2413 aaPredicted RBP0.32□□□□□ -2.36
CPNE8-205ENST00000547417 PRKDCP78527 4128 aaKnown RBP0.32□□□□□ -2.36
CPNE8-205ENST00000547417 HRNRQ86YZ3 2850 aaPredicted RBP0.31□□□□□ -2.36
CPNE8-205ENST00000547417 LINC00959A0A1B0GUT2 108 aa0.31□□□□□ -2.36
CPNE8-205ENST00000547417 ARMS2P0C7Q2 107 aa0.31□□□□□ -2.36
CPNE8-205ENST00000547417 WFDC2Q14508 124 aa0.31□□□□□ -2.36
CPNE8-205ENST00000547417 Q5VSD8 79 aa0.31□□□□□ -2.36
CPNE8-205ENST00000547417 ALKAL2Q6UX46 152 aa0.31□□□□□ -2.36
CPNE8-205ENST00000547417 COL7A1Q02388 2944 aa0.31□□□□□ -2.36
CPNE8-205ENST00000547417 MON2Q7Z3U7 1717 aa0.3□□□□□ -2.36
CPNE8-205ENST00000547417 GNG2P59768 71 aa0.3□□□□□ -2.36
CPNE8-205ENST00000547417 PYY3Q5JQD4 70 aa0.3□□□□□ -2.36
CPNE8-205ENST00000547417 C6orf201Q7Z4U5 140 aa0.3□□□□□ -2.36
CPNE8-205ENST00000547417 LCN9Q8WX39 176 aa0.3□□□□□ -2.36
CPNE8-205ENST00000547417 KIAA0556O60303 1618 aa0.3□□□□□ -2.36
CPNE8-205ENST00000547417 KNDC1Q76NI1 1749 aa0.3□□□□□ -2.36
CPNE8-205ENST00000547417 KIAA1551Q9HCM1 1747 aa0.3□□□□□ -2.36
CPNE8-205ENST00000547417 CHD8Q9HCK8 2581 aa0.29□□□□□ -2.36
CPNE8-205ENST00000547417 FAT2Q9NYQ8 4349 aa0.29□□□□□ -2.36
CPNE8-205ENST00000547417 FXYD6-FXYD2A0A087WZ82 144 aa0.29□□□□□ -2.36
CPNE8-205ENST00000547417 A0A1B0GU69 56 aa0.29□□□□□ -2.36
CPNE8-205ENST00000547417 PVALEFA0A1B0GWK0 134 aa0.29□□□□□ -2.36
CPNE8-205ENST00000547417 COX6B1P14854 86 aa0.29□□□□□ -2.36
CPNE8-205ENST00000547417 SMIM11AP58511 58 aa0.29□□□□□ -2.36
CPNE8-205ENST00000547417 GNGT1P63211 74 aa0.29□□□□□ -2.36
CPNE8-205ENST00000547417 USMG5Q96IX5 58 aa0.29□□□□□ -2.36
CPNE8-205ENST00000547417 C5P01031 1676 aa0.29□□□□□ -2.36
CPNE8-205ENST00000547417 KMT2DO14686 5537 aa0.29□□□□□ -2.36
CPNE8-205ENST00000547417 LRRC37AA6NMS7 1700 aa0.29□□□□□ -2.36
CPNE8-205ENST00000547417 PAPPA2Q9BXP8 1791 aa0.29□□□□□ -2.36
CPNE8-205ENST00000547417 SYNE1Q8NF91 8797 aaKnown RBP0.28□□□□□ -2.36
CPNE8-205ENST00000547417 SAMD9Q5K651 1589 aa0.28□□□□□ -2.36
CPNE8-205ENST00000547417 PPRC1Q5VV67 1664 aaKnown RBP0.28□□□□□ -2.36
CPNE8-205ENST00000547417 RGPD4Q7Z3J3 1758 aa0.28□□□□□ -2.36
CPNE8-205ENST00000547417 F8WEM9 126 aa0.28□□□□□ -2.36
CPNE8-205ENST00000547417 CFDP00746 253 aaPredicted RBP0.28□□□□□ -2.36
CPNE8-205ENST00000547417 DEFB107AQ8IZN7 70 aa0.28□□□□□ -2.36
CPNE8-205ENST00000547417 PLIN4Q96Q06 1357 aa0.28□□□□□ -2.36
CPNE8-205ENST00000547417 MDN1Q9NU22 5596 aa0.28□□□□□ -2.37
CPNE8-205ENST00000547417 CRYBG1Q9Y4K1 1723 aa0.27□□□□□ -2.37
CPNE8-205ENST00000547417 MYH4Q9Y623 1939 aa0.27□□□□□ -2.37
CPNE8-205ENST00000547417 MAP1AP78559 2803 aaPredicted RBP0.27□□□□□ -2.37
CPNE8-205ENST00000547417 D6R8Y8 96 aa0.27□□□□□ -2.37
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms