RNA–Protein interactions for RNA: ENST00000547055.1

RAB3IP-209, Transcript of RAB3A interacting protein, humanhuman

TSL 3

Gene RAB3IP, Length 438 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-209ENST00000547055 Q5XG85 94 aa1.54□□□□□ -2.16
RAB3IP-209ENST00000547055 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP1.54□□□□□ -2.16
RAB3IP-209ENST00000547055 FAM19A1Q7Z5A9 133 aa1.54□□□□□ -2.16
RAB3IP-209ENST00000547055 GPHB5Q86YW7 130 aa1.54□□□□□ -2.16
RAB3IP-209ENST00000547055 MIR7-3HGQ8N6C7 128 aa1.54□□□□□ -2.16
RAB3IP-209ENST00000547055 CNEP1R1Q8N9A8 125 aa1.54□□□□□ -2.16
RAB3IP-209ENST00000547055 GAFA1Q96PS6 74 aa1.54□□□□□ -2.16
RAB3IP-209ENST00000547055 PRR15LQ9BU68 103 aa1.54□□□□□ -2.16
RAB3IP-209ENST00000547055 KRTAP4-1Q9BYQ7 146 aa1.54□□□□□ -2.16
RAB3IP-209ENST00000547055 SND1-IT1Q9HBX3 110 aa1.54□□□□□ -2.16
RAB3IP-209ENST00000547055 PROK2Q9HC23 129 aa1.54□□□□□ -2.16
RAB3IP-209ENST00000547055 MUC22E2RYF6 1773 aaPredicted RBP1.54□□□□□ -2.16
RAB3IP-209ENST00000547055 PTPRBP23467 1997 aa1.54□□□□□ -2.16
RAB3IP-209ENST00000547055 DIDO1Q9BTC0 2240 aaKnown RBP1.54□□□□□ -2.16
RAB3IP-209ENST00000547055 ZNF407Q9C0G0 2248 aa1.54□□□□□ -2.16
RAB3IP-209ENST00000547055 TRBV6-8A0A0A6YYG3 113 aa1.53□□□□□ -2.16
RAB3IP-209ENST00000547055 TRBV6-4A0A1B0GX49 114 aa1.53□□□□□ -2.16
RAB3IP-209ENST00000547055 E7EQL1 145 aa1.53□□□□□ -2.16
RAB3IP-209ENST00000547055 H3BUX3 64 aa1.53□□□□□ -2.16
RAB3IP-209ENST00000547055 LY6HO94772 140 aa1.53□□□□□ -2.16
RAB3IP-209ENST00000547055 IGHV3-53P01767 116 aa1.53□□□□□ -2.16
RAB3IP-209ENST00000547055 PRM2P04554 102 aa1.53□□□□□ -2.16
RAB3IP-209ENST00000547055 SS18Q15532 418 aa1.53□□□□□ -2.16
RAB3IP-209ENST00000547055 NREPQ16612 68 aa1.53□□□□□ -2.16
RAB3IP-209ENST00000547055 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa1.53□□□□□ -2.16
RAB3IP-209ENST00000547055 Q8N814 137 aa1.53□□□□□ -2.16
RAB3IP-209ENST00000547055 ITLN2Q8WWU7 325 aaPredicted RBP1.53□□□□□ -2.16
RAB3IP-209ENST00000547055 PATE1Q8WXA2 126 aa1.53□□□□□ -2.16
RAB3IP-209ENST00000547055 RNASE6Q93091 150 aaKnown RBP1.53□□□□□ -2.16
RAB3IP-209ENST00000547055 HIGD2AQ9BW72 106 aa1.53□□□□□ -2.16
RAB3IP-209ENST00000547055 XAGE1AQ9HD64 81 aa1.53□□□□□ -2.16
RAB3IP-209ENST00000547055 CACNA1BQ00975 2339 aa1.52□□□□□ -2.17
RAB3IP-209ENST00000547055 ZGRF1Q86YA3 2104 aa1.52□□□□□ -2.17
RAB3IP-209ENST00000547055 KIAA1549Q9HCM3 1950 aa1.52□□□□□ -2.17
RAB3IP-209ENST00000547055 LTBP2Q14767 1821 aa1.52□□□□□ -2.17
RAB3IP-209ENST00000547055 IGKV2-40A0A087WW87 121 aaPredicted RBP1.52□□□□□ -2.17
RAB3IP-209ENST00000547055 IGHV3-21A0A0B4J1V1 117 aa1.52□□□□□ -2.17
RAB3IP-209ENST00000547055 A8MUU9 505 aa1.52□□□□□ -2.17
RAB3IP-209ENST00000547055 F8WEM9 126 aa1.52□□□□□ -2.17
RAB3IP-209ENST00000547055 IGKV2D-40P01614 121 aaPredicted RBP1.52□□□□□ -2.17
RAB3IP-209ENST00000547055 CCL5P13501 91 aa1.52□□□□□ -2.17
RAB3IP-209ENST00000547055 COX7BP24311 80 aa1.52□□□□□ -2.17
RAB3IP-209ENST00000547055 LINC00158P58513 81 aa1.52□□□□□ -2.17
RAB3IP-209ENST00000547055 KRTAP12-3P60328 96 aa1.52□□□□□ -2.17
RAB3IP-209ENST00000547055 HAMPP81172 84 aa1.52□□□□□ -2.17
RAB3IP-209ENST00000547055 DEFB103AP81534 67 aa1.52□□□□□ -2.17
RAB3IP-209ENST00000547055 KRTAP13-2Q52LG2 175 aa1.52□□□□□ -2.17
RAB3IP-209ENST00000547055 PRR9Q5T870 116 aa1.52□□□□□ -2.17
RAB3IP-209ENST00000547055 ENHOQ6UWT2 76 aa1.52□□□□□ -2.17
RAB3IP-209ENST00000547055 Q8IZM0 81 aa1.52□□□□□ -2.17
RAB3IP-209ENST00000547055 Q8N6K4 173 aa1.52□□□□□ -2.17
RAB3IP-209ENST00000547055 COX7B2Q8TF08 81 aa1.52□□□□□ -2.17
RAB3IP-209ENST00000547055 TM2D3Q9BRN9 247 aa1.52□□□□□ -2.17
RAB3IP-209ENST00000547055 TP53AIP1Q9HCN2 124 aa1.52□□□□□ -2.17
RAB3IP-209ENST00000547055 LINC00846Q9NV44 126 aa1.52□□□□□ -2.17
RAB3IP-209ENST00000547055 CRCT1Q9UGL9 99 aa1.52□□□□□ -2.17
RAB3IP-209ENST00000547055 CACNA1EQ15878 2313 aa1.52□□□□□ -2.17
RAB3IP-209ENST00000547055 KNL1Q8NG31 2342 aa1.52□□□□□ -2.17
RAB3IP-209ENST00000547055 PTPRSQ13332 1948 aa1.52□□□□□ -2.17
RAB3IP-209ENST00000547055 TRBV7-4A0A0J9YYF1 115 aa1.51□□□□□ -2.17
RAB3IP-209ENST00000547055 RNASE3P12724 160 aaKnown RBP1.51□□□□□ -2.17
RAB3IP-209ENST00000547055 CD24P25063 80 aa1.51□□□□□ -2.17
RAB3IP-209ENST00000547055 CASC2Q6XLA1 102 aa1.51□□□□□ -2.17
RAB3IP-209ENST00000547055 C7orf65Q6ZTY9 151 aa1.51□□□□□ -2.17
RAB3IP-209ENST00000547055 LCA10Q71F78 164 aa1.51□□□□□ -2.17
RAB3IP-209ENST00000547055 LINC00337Q8N6G1 96 aa1.51□□□□□ -2.17
RAB3IP-209ENST00000547055 ZFAND2AQ8N6M9 145 aa1.51□□□□□ -2.17
RAB3IP-209ENST00000547055 CLEC2BQ92478 149 aa1.51□□□□□ -2.17
RAB3IP-209ENST00000547055 DIRC1Q969H9 104 aa1.51□□□□□ -2.17
RAB3IP-209ENST00000547055 ZNF625Q96I27 306 aaPredicted RBP1.51□□□□□ -2.17
RAB3IP-209ENST00000547055 Q9BRP9 147 aa1.51□□□□□ -2.17
RAB3IP-209ENST00000547055 TTTY13Q9BZ97 58 aa1.51□□□□□ -2.17
RAB3IP-209ENST00000547055 C14orf132Q9NPU4 83 aa1.51□□□□□ -2.17
RAB3IP-209ENST00000547055 TPRP12270 2363 aaKnown RBP1.51□□□□□ -2.17
RAB3IP-209ENST00000547055 URB1O60287 2271 aaKnown RBP1.51□□□□□ -2.17
RAB3IP-209ENST00000547055 COL4A5P29400 1685 aa1.51□□□□□ -2.17
RAB3IP-209ENST00000547055 MED13Q9UHV7 2174 aa1.51□□□□□ -2.17
RAB3IP-209ENST00000547055 DSCAMO60469 2012 aa1.5□□□□□ -2.17
RAB3IP-209ENST00000547055 ETDCA0A1B0GVM5 59 aa1.5□□□□□ -2.17
RAB3IP-209ENST00000547055 ODF3BA8MYP8 253 aa1.5□□□□□ -2.17
RAB3IP-209ENST00000547055 C16orf90A8MZG2 172 aa1.5□□□□□ -2.17
RAB3IP-209ENST00000547055 LECT2O14960 151 aa1.5□□□□□ -2.17
RAB3IP-209ENST00000547055 Q6ZQT0 140 aa1.5□□□□□ -2.17
RAB3IP-209ENST00000547055 SCXQ7RTU7 201 aa1.5□□□□□ -2.17
RAB3IP-209ENST00000547055 DEFB108BQ8NET1 73 aa1.5□□□□□ -2.17
RAB3IP-209ENST00000547055 Q8TAT8 98 aa1.5□□□□□ -2.17
RAB3IP-209ENST00000547055 RETNLBQ9BQ08 111 aa1.5□□□□□ -2.17
RAB3IP-209ENST00000547055 RHPN1-AS1Q9BWJ2 59 aa1.5□□□□□ -2.17
RAB3IP-209ENST00000547055 CDC42SE2Q9NRR3 84 aa1.5□□□□□ -2.17
RAB3IP-209ENST00000547055 CDKN2A-AS1Q9UH64 79 aa1.5□□□□□ -2.17
RAB3IP-209ENST00000547055 DSCAML1Q8TD84 2053 aa1.5□□□□□ -2.17
RAB3IP-209ENST00000547055 ABCA1O95477 2261 aa1.5□□□□□ -2.17
RAB3IP-209ENST00000547055 DNAJC13O75165 2243 aa1.5□□□□□ -2.17
RAB3IP-209ENST00000547055 FREM1Q5H8C1 2179 aa1.49□□□□□ -2.17
RAB3IP-209ENST00000547055 PLXNB1O43157 2135 aa1.49□□□□□ -2.17
RAB3IP-209ENST00000547055 A0A0C4DFX4 3053 aa1.49□□□□□ -2.17
RAB3IP-209ENST00000547055 POLEQ07864 2286 aa1.49□□□□□ -2.17
RAB3IP-209ENST00000547055 TRGV2A0A075B6R0 118 aa1.49□□□□□ -2.17
RAB3IP-209ENST00000547055 GVQW2A0A096LPI5 108 aaPredicted RBP1.49□□□□□ -2.17
RAB3IP-209ENST00000547055 IGKV3D-7A0A0C4DH55 119 aa1.49□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms