RNA–Protein interactions for RNA: ENST00000545358.5

NPIPB3-214, Transcript of nuclear pore complex interacting protein family member B3, humanhuman

TSL 5

Gene NPIPB3, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB3-214ENST00000545358 TRAV16A0A0A6YYK6 109 aaPredicted RBP3.72□□□□□ -1.81
NPIPB3-214ENST00000545358 A0A0B4J2C4 111 aa3.72□□□□□ -1.81
NPIPB3-214ENST00000545358 K7ERJ3 54 aa3.72□□□□□ -1.81
NPIPB3-214ENST00000545358 CRPP02741 224 aa3.72□□□□□ -1.81
NPIPB3-214ENST00000545358 CXCL5P42830 114 aa3.72□□□□□ -1.81
NPIPB3-214ENST00000545358 XCL1P47992 114 aa3.72□□□□□ -1.81
NPIPB3-214ENST00000545358 CLPSL2Q6UWE3 100 aa3.72□□□□□ -1.81
NPIPB3-214ENST00000545358 Q8IZM0 81 aa3.72□□□□□ -1.81
NPIPB3-214ENST00000545358 MRAPQ8TCY5 172 aa3.72□□□□□ -1.81
NPIPB3-214ENST00000545358 CHCHD10Q8WYQ3 142 aaPredicted RBP3.72□□□□□ -1.81
NPIPB3-214ENST00000545358 B9D2Q9BPU9 175 aa3.72□□□□□ -1.81
NPIPB3-214ENST00000545358 KRTAP4-5Q9BYR2 181 aa3.72□□□□□ -1.81
NPIPB3-214ENST00000545358 TRAV8-4A0A0B4J246 113 aa3.71□□□□□ -1.82
NPIPB3-214ENST00000545358 A0A1W2PPM0 123 aa3.71□□□□□ -1.82
NPIPB3-214ENST00000545358 H3BUT2 72 aa3.71□□□□□ -1.82
NPIPB3-214ENST00000545358 COX7A2LO14548 114 aa3.71□□□□□ -1.82
NPIPB3-214ENST00000545358 FOXI1Q12951 378 aa3.71□□□□□ -1.82
NPIPB3-214ENST00000545358 VAMP3Q15836 100 aa3.71□□□□□ -1.82
NPIPB3-214ENST00000545358 LINC01556Q5JQF7 62 aa3.71□□□□□ -1.82
NPIPB3-214ENST00000545358 MEIG1Q5JSS6 88 aa3.71□□□□□ -1.82
NPIPB3-214ENST00000545358 LYRM7Q5U5X0 104 aa3.71□□□□□ -1.82
NPIPB3-214ENST00000545358 C5orf38Q86SI9 138 aa3.71□□□□□ -1.82
NPIPB3-214ENST00000545358 WFDC10BQ8IUB3 73 aa3.71□□□□□ -1.82
NPIPB3-214ENST00000545358 RAB37Q96AX2 223 aa3.71□□□□□ -1.82
NPIPB3-214ENST00000545358 COL6A5A8TX70 2615 aa3.7□□□□□ -1.82
NPIPB3-214ENST00000545358 A4D1N5 150 aa3.7□□□□□ -1.82
NPIPB3-214ENST00000545358 IBA57-AS1B1ANH7 110 aa3.7□□□□□ -1.82
NPIPB3-214ENST00000545358 IGLL5B9A064 214 aa3.7□□□□□ -1.82
NPIPB3-214ENST00000545358 K7EP34 96 aa3.7□□□□□ -1.82
NPIPB3-214ENST00000545358 APOMO95445 188 aa3.7□□□□□ -1.82
NPIPB3-214ENST00000545358 PRSS2P07478 247 aa3.7□□□□□ -1.82
NPIPB3-214ENST00000545358 FABP2P12104 132 aa3.7□□□□□ -1.82
NPIPB3-214ENST00000545358 UBE2V1Q13404 147 aa3.7□□□□□ -1.82
NPIPB3-214ENST00000545358 ESRGQ1W209 222 aa3.7□□□□□ -1.82
NPIPB3-214ENST00000545358 KRTAP21-3Q3LHN1 58 aa3.7□□□□□ -1.82
NPIPB3-214ENST00000545358 GTF2H5Q6ZYL4 71 aa3.7□□□□□ -1.82
NPIPB3-214ENST00000545358 MUSTN1Q8IVN3 82 aa3.7□□□□□ -1.82
NPIPB3-214ENST00000545358 TOMM7Q9P0U1 55 aa3.7□□□□□ -1.82
NPIPB3-214ENST00000545358 KLK12Q9UKR0 248 aa3.7□□□□□ -1.82
NPIPB3-214ENST00000545358 GAGE12HA6NDE8 117 aa3.69□□□□□ -1.82
NPIPB3-214ENST00000545358 TSPAN13O95857 204 aa3.69□□□□□ -1.82
NPIPB3-214ENST00000545358 IGHV3-33P01772 117 aa3.69□□□□□ -1.82
NPIPB3-214ENST00000545358 NHLRC4P0CG21 123 aaPredicted RBP3.69□□□□□ -1.82
NPIPB3-214ENST00000545358 CFC1BP0CG36 223 aa3.69□□□□□ -1.82
NPIPB3-214ENST00000545358 CFC1P0CG37 223 aa3.69□□□□□ -1.82
NPIPB3-214ENST00000545358 DNAH10OSP0CZ25 163 aa3.69□□□□□ -1.82
NPIPB3-214ENST00000545358 MALP21145 153 aa3.69□□□□□ -1.82
NPIPB3-214ENST00000545358 C6orf226Q5I0X4 101 aa3.69□□□□□ -1.82
NPIPB3-214ENST00000545358 ADAMTSL4-AS1Q5T5F5 129 aa3.69□□□□□ -1.82
NPIPB3-214ENST00000545358 CFAP161Q6P656 301 aa3.69□□□□□ -1.82
NPIPB3-214ENST00000545358 ENHOQ6UWT2 76 aa3.69□□□□□ -1.82
NPIPB3-214ENST00000545358 MUC7Q8TAX7 377 aa3.69□□□□□ -1.82
NPIPB3-214ENST00000545358 LINC00308Q8TCZ7 52 aa3.69□□□□□ -1.82
NPIPB3-214ENST00000545358 UPK3BQ9BT76 320 aa3.69□□□□□ -1.82
NPIPB3-214ENST00000545358 SPCS1Q9Y6A9 102 aa3.69□□□□□ -1.82
NPIPB3-214ENST00000545358 HUWE1Q7Z6Z7 4374 aaKnown RBP3.69□□□□□ -1.82
NPIPB3-214ENST00000545358 IGLV10-54A0A075B6I4 117 aa3.68□□□□□ -1.82
NPIPB3-214ENST00000545358 GAGE10A6NGK3 116 aa3.68□□□□□ -1.82
NPIPB3-214ENST00000545358 CCL18P55774 89 aa3.68□□□□□ -1.82
NPIPB3-214ENST00000545358 SPAG11BQ08648 103 aa3.68□□□□□ -1.82
NPIPB3-214ENST00000545358 KIAA0087Q14695 138 aa3.68□□□□□ -1.82
NPIPB3-214ENST00000545358 KRTAP5-3Q6L8H2 238 aa3.68□□□□□ -1.82
NPIPB3-214ENST00000545358 UBE2WQ96B02 151 aa3.68□□□□□ -1.82
NPIPB3-214ENST00000545358 NAA38Q9BRA0 125 aaKnown RBP3.68□□□□□ -1.82
NPIPB3-214ENST00000545358 PRO1854Q9UHT4 67 aa3.68□□□□□ -1.82
NPIPB3-214ENST00000545358 ERG28Q9UKR5 140 aa3.68□□□□□ -1.82
NPIPB3-214ENST00000545358 KLK5Q9Y337 293 aaPredicted RBP3.68□□□□□ -1.82
NPIPB3-214ENST00000545358 CKS1BP61024 79 aa3.67□□□□□ -1.82
NPIPB3-214ENST00000545358 NPC2P61916 151 aa3.67□□□□□ -1.82
NPIPB3-214ENST00000545358 COX17Q14061 63 aa3.67□□□□□ -1.82
NPIPB3-214ENST00000545358 MIR7-3HGQ8N6C7 128 aa3.67□□□□□ -1.82
NPIPB3-214ENST00000545358 DAND5Q8N907 189 aa3.67□□□□□ -1.82
NPIPB3-214ENST00000545358 C1orf43Q9BWL3 253 aa3.67□□□□□ -1.82
NPIPB3-214ENST00000545358 LINC00588Q9Y4M8 146 aa3.67□□□□□ -1.82
NPIPB3-214ENST00000545358 NBEAL2Q6ZNJ1 2754 aa3.67□□□□□ -1.82
NPIPB3-214ENST00000545358 GVQW2A0A096LPI5 108 aaPredicted RBP3.66□□□□□ -1.82
NPIPB3-214ENST00000545358 NUPR2A6NF83 97 aa3.66□□□□□ -1.82
NPIPB3-214ENST00000545358 F8WDY8 70 aa3.66□□□□□ -1.82
NPIPB3-214ENST00000545358 RPL13AP40429 203 aaKnown RBP3.66□□□□□ -1.82
NPIPB3-214ENST00000545358 LINC00158P58513 81 aa3.66□□□□□ -1.82
NPIPB3-214ENST00000545358 Q1RN00 199 aa3.66□□□□□ -1.82
NPIPB3-214ENST00000545358 KRTAP26-1Q6PEX3 210 aa3.66□□□□□ -1.82
NPIPB3-214ENST00000545358 SOSTDC1Q6X4U4 206 aa3.66□□□□□ -1.82
NPIPB3-214ENST00000545358 RMI2Q96E14 147 aa3.66□□□□□ -1.82
NPIPB3-214ENST00000545358 TRBV20-1A0A075B6N2 111 aa3.65□□□□□ -1.83
NPIPB3-214ENST00000545358 TRAV13-2A0A0B4J235 113 aa3.65□□□□□ -1.83
NPIPB3-214ENST00000545358 LOC107984156A0A0G2JMH3 177 aa3.65□□□□□ -1.83
NPIPB3-214ENST00000545358 TRBV30A0A0K0K1B3 111 aa3.65□□□□□ -1.83
NPIPB3-214ENST00000545358 A0A0U1RRA0 63 aa3.65□□□□□ -1.83
NPIPB3-214ENST00000545358 KRTAP23-1A1A580 65 aa3.65□□□□□ -1.83
NPIPB3-214ENST00000545358 C2orf82Q6UX34 121 aa3.65□□□□□ -1.83
NPIPB3-214ENST00000545358 ARL17AQ8IVW1 177 aa3.65□□□□□ -1.83
NPIPB3-214ENST00000545358 SND1-IT1Q9HBX3 110 aa3.65□□□□□ -1.83
NPIPB3-214ENST00000545358 PKD1L1Q8TDX9 2849 aa3.65□□□□□ -1.83
NPIPB3-214ENST00000545358 TENM3Q9P273 2699 aa3.64□□□□□ -1.83
NPIPB3-214ENST00000545358 IGKV2D-24A0A075B6R9 120 aa3.64□□□□□ -1.83
NPIPB3-214ENST00000545358 PFN2P35080 140 aa3.64□□□□□ -1.83
NPIPB3-214ENST00000545358 PSMB2P49721 201 aa3.64□□□□□ -1.83
NPIPB3-214ENST00000545358 Q8N1X5 172 aa3.64□□□□□ -1.83
NPIPB3-214ENST00000545358 C15orf56Q8N910 161 aa3.64□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms