RNA–Protein interactions for RNA: ENST00000544336.5

PDCD2-211, Transcript of programmed cell death 2, humanhuman

TSL 1 (best)

Gene PDCD2, Length 1,164 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD2-211ENST00000544336 NPSP0C0P6 89 aa16.35■□□□□ 0.21
PDCD2-211ENST00000544336 HERVK_113P63121 156 aa16.35■□□□□ 0.21
PDCD2-211ENST00000544336 LBHQ53QV2 105 aaPredicted RBP16.35■□□□□ 0.21
PDCD2-211ENST00000544336 GEMIN7Q9H840 131 aaKnown RBP16.35■□□□□ 0.21
PDCD2-211ENST00000544336 PNRC1Q12796 327 aaPredicted RBP16.34■□□□□ 0.21
PDCD2-211ENST00000544336 F8VRH5 84 aa16.33■□□□□ 0.2
PDCD2-211ENST00000544336 K7EMI3 77 aa16.33■□□□□ 0.2
PDCD2-211ENST00000544336 NXT2Q9NPJ8 142 aaKnown RBP16.33■□□□□ 0.2
PDCD2-211ENST00000544336 TSPAN13O95857 204 aa16.32■□□□□ 0.2
PDCD2-211ENST00000544336 SEC11AP67812 179 aa16.32■□□□□ 0.2
PDCD2-211ENST00000544336 PAPPA-AS1Q5QFB9 102 aa16.31■□□□□ 0.2
PDCD2-211ENST00000544336 MRPL55Q7Z7F7 128 aaKnown RBP16.31■□□□□ 0.2
PDCD2-211ENST00000544336 TIMM17AQ99595 171 aa16.29■□□□□ 0.2
PDCD2-211ENST00000544336 TOMM6Q96B49 74 aa16.28■□□□□ 0.2
PDCD2-211ENST00000544336 KIAA1644Q3SXP7 199 aa16.27■□□□□ 0.2
PDCD2-211ENST00000544336 TP73-AS1Q9UF72 201 aa16.27■□□□□ 0.2
PDCD2-211ENST00000544336 RPL37AP8A6NKH3 93 aa16.26■□□□□ 0.19
PDCD2-211ENST00000544336 G0S2P27469 103 aa16.26■□□□□ 0.19
PDCD2-211ENST00000544336 CXCL5P42830 114 aa16.26■□□□□ 0.19
PDCD2-211ENST00000544336 RPL28P46779 137 aaKnown RBP16.26■□□□□ 0.19
PDCD2-211ENST00000544336 A0A087X002 238 aa16.25■□□□□ 0.19
PDCD2-211ENST00000544336 BCE1O60756 84 aa16.25■□□□□ 0.19
PDCD2-211ENST00000544336 SMIM1B2RUZ4 78 aa16.24■□□□□ 0.19
PDCD2-211ENST00000544336 LINC00167Q96N53 147 aa16.24■□□□□ 0.19
PDCD2-211ENST00000544336 SCGB3A1Q96QR1 104 aa16.24■□□□□ 0.19
PDCD2-211ENST00000544336 GAGE10A6NGK3 116 aa16.23■□□□□ 0.19
PDCD2-211ENST00000544336 COX7B2Q8TF08 81 aa16.23■□□□□ 0.19
PDCD2-211ENST00000544336 ERASQ7Z444 233 aa16.22■□□□□ 0.19
PDCD2-211ENST00000544336 ADCYAP1P18509 176 aa16.21■□□□□ 0.19
PDCD2-211ENST00000544336 RAB5BP61020 215 aa16.2■□□□□ 0.18
PDCD2-211ENST00000544336 RAB14P61106 215 aa16.2■□□□□ 0.18
PDCD2-211ENST00000544336 PDZD11Q5EBL8 140 aa16.2■□□□□ 0.18
PDCD2-211ENST00000544336 TYMSOSQ8TAI1 123 aa16.2■□□□□ 0.18
PDCD2-211ENST00000544336 CRYGAP11844 174 aa16.19■□□□□ 0.18
PDCD2-211ENST00000544336 TINCRA0A1B0GVN0 87 aa16.18■□□□□ 0.18
PDCD2-211ENST00000544336 ANAPC11Q9NYG5 84 aa16.18■□□□□ 0.18
PDCD2-211ENST00000544336 SPINK8P0C7L1 97 aa16.17■□□□□ 0.18
PDCD2-211ENST00000544336 MUC2Q02817 5179 aa16.17■□□□□ 0.18
PDCD2-211ENST00000544336 IGLV5-45A0A087WSX0 123 aa16.14■□□□□ 0.17
PDCD2-211ENST00000544336 NKAPP1Q8N9T2 125 aa16.14■□□□□ 0.17
PDCD2-211ENST00000544336 UBE2AP49459 152 aa16.13■□□□□ 0.17
PDCD2-211ENST00000544336 CST9LQ9H4G1 147 aa16.13■□□□□ 0.17
PDCD2-211ENST00000544336 SCO1O75880 301 aa16.11■□□□□ 0.17
PDCD2-211ENST00000544336 IGLV5-37A0A075B6J1 123 aa16.1■□□□□ 0.17
PDCD2-211ENST00000544336 KRTAP13-2Q52LG2 175 aa16.09■□□□□ 0.17
PDCD2-211ENST00000544336 IGKV2-28A0A075B6P5 120 aa16.08■□□□□ 0.16
PDCD2-211ENST00000544336 IGKV2D-28P01615 120 aa16.08■□□□□ 0.16
PDCD2-211ENST00000544336 PMVKQ15126 192 aa16.08■□□□□ 0.16
PDCD2-211ENST00000544336 KRTAP13-1Q8IUC0 172 aa16.08■□□□□ 0.16
PDCD2-211ENST00000544336 A0A0U1RQV1 116 aa16.07■□□□□ 0.16
PDCD2-211ENST00000544336 TRAV9-1A0A075B6T8 112 aa16.06■□□□□ 0.16
PDCD2-211ENST00000544336 LINC01546A6NGU7 62 aa16.06■□□□□ 0.16
PDCD2-211ENST00000544336 LINC01549A6NIU2 74 aa16.06■□□□□ 0.16
PDCD2-211ENST00000544336 ATP5LO75964 103 aa16.06■□□□□ 0.16
PDCD2-211ENST00000544336 RETNLBQ9BQ08 111 aa16.06■□□□□ 0.16
PDCD2-211ENST00000544336 PFN2P35080 140 aa16.05■□□□□ 0.16
PDCD2-211ENST00000544336 H3BRM9 83 aa16.04■□□□□ 0.16
PDCD2-211ENST00000544336 FA2HQ7L5A8 372 aa16.04■□□□□ 0.16
PDCD2-211ENST00000544336 MRPL18Q9H0U6 180 aaKnown RBP16.04■□□□□ 0.16
PDCD2-211ENST00000544336 GNB1LQ9BYB4 327 aa16.03■□□□□ 0.16
PDCD2-211ENST00000544336 SMCO4Q9NRQ5 59 aa16.03■□□□□ 0.16
PDCD2-211ENST00000544336 PRLHP81277 87 aa16.02■□□□□ 0.16
PDCD2-211ENST00000544336 CLLU1Q5K131 121 aa16.02■□□□□ 0.16
PDCD2-211ENST00000544336 S100PP25815 95 aa16.01■□□□□ 0.15
PDCD2-211ENST00000544336 LINC00304Q8N9R0 145 aa16.01■□□□□ 0.15
PDCD2-211ENST00000544336 FAM229BQ4G0N7 80 aa16■□□□□ 0.15
PDCD2-211ENST00000544336 TMEM218A2RU14 115 aa15.99■□□□□ 0.15
PDCD2-211ENST00000544336 NDUFA6P56556 154 aa15.99■□□□□ 0.15
PDCD2-211ENST00000544336 FAM19A1Q7Z5A9 133 aa15.99■□□□□ 0.15
PDCD2-211ENST00000544336 IGKV2D-26A0A0A0MRZ7 120 aa15.97■□□□□ 0.15
PDCD2-211ENST00000544336 TMEM238C9JI98 176 aa15.97■□□□□ 0.15
PDCD2-211ENST00000544336 IGLC3P0DOY3 106 aa15.97■□□□□ 0.15
PDCD2-211ENST00000544336 FABP9Q0Z7S8 132 aa15.97■□□□□ 0.15
PDCD2-211ENST00000544336 VPREB1P12018 145 aa15.96■□□□□ 0.15
PDCD2-211ENST00000544336 SND1-IT1Q9HBX3 110 aa15.96■□□□□ 0.15
PDCD2-211ENST00000544336 IGLV5-39A0A0G2JS06 123 aa15.95■□□□□ 0.14
PDCD2-211ENST00000544336 UQCC3Q6UW78 93 aa15.95■□□□□ 0.14
PDCD2-211ENST00000544336 ZNF625Q96I27 306 aaPredicted RBP15.95■□□□□ 0.14
PDCD2-211ENST00000544336 TMEM126AQ9H061 195 aa15.95■□□□□ 0.14
PDCD2-211ENST00000544336 ERG28Q9UKR5 140 aa15.95■□□□□ 0.14
PDCD2-211ENST00000544336 ZNF22P17026 224 aaPredicted RBP15.94■□□□□ 0.14
PDCD2-211ENST00000544336 COX19Q49B96 90 aa15.92■□□□□ 0.14
PDCD2-211ENST00000544336 RPL24P83731 157 aaKnown RBP15.9■□□□□ 0.14
PDCD2-211ENST00000544336 A0A096LNJ9 63 aa15.89■□□□□ 0.13
PDCD2-211ENST00000544336 M0R378 163 aa15.89■□□□□ 0.13
PDCD2-211ENST00000544336 Q8NDZ9 215 aa15.89■□□□□ 0.13
PDCD2-211ENST00000544336 SEC11CQ9BY50 192 aa15.89■□□□□ 0.13
PDCD2-211ENST00000544336 CDIP1Q9H305 208 aa15.89■□□□□ 0.13
PDCD2-211ENST00000544336 COX17Q14061 63 aa15.87■□□□□ 0.13
PDCD2-211ENST00000544336 IGLV7-46A0A075B6I9 117 aa15.86■□□□□ 0.13
PDCD2-211ENST00000544336 PMCHL1Q16048 86 aa15.86■□□□□ 0.13
PDCD2-211ENST00000544336 CBLN2Q8IUK8 224 aa15.86■□□□□ 0.13
PDCD2-211ENST00000544336 C3orf22Q8N5N4 141 aa15.86■□□□□ 0.13
PDCD2-211ENST00000544336 PLEKHB2Q96CS7 222 aa15.85■□□□□ 0.13
PDCD2-211ENST00000544336 URB1-AS1Q96HZ7 61 aa15.85■□□□□ 0.13
PDCD2-211ENST00000544336 HIGD2AQ9BW72 106 aa15.84■□□□□ 0.13
PDCD2-211ENST00000544336 KRTAP9-2Q9BYQ4 174 aa15.84■□□□□ 0.13
PDCD2-211ENST00000544336 FAT4Q6V0I7 4981 aa15.83■□□□□ 0.13
PDCD2-211ENST00000544336 C11orf86A6NJI1 115 aa15.83■□□□□ 0.12
PDCD2-211ENST00000544336 HBDP02042 147 aa15.83■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms