RNA–Protein interactions for RNA: ENST00000542786.1

LDB3-207, Transcript of LIM domain binding 3, humanhuman

TSL 2 BASIC

Gene LDB3, Length 1,889 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-207ENST00000542786 A0A0J9YWU9 116 aa9.63□□□□□ -0.87
LDB3-207ENST00000542786 KPRPQ5T749 579 aaPredicted RBP9.63□□□□□ -0.87
LDB3-207ENST00000542786 MIR7-3HGQ8N6C7 128 aa9.63□□□□□ -0.87
LDB3-207ENST00000542786 SCGB1C2P0DMR2 95 aa9.62□□□□□ -0.87
LDB3-207ENST00000542786 Q1RN00 199 aa9.62□□□□□ -0.87
LDB3-207ENST00000542786 COX7A2LO14548 114 aa9.62□□□□□ -0.87
LDB3-207ENST00000542786 ETDBQ3ZM63 59 aa9.62□□□□□ -0.87
LDB3-207ENST00000542786 IGLV10-54A0A075B6I4 117 aa9.61□□□□□ -0.87
LDB3-207ENST00000542786 NOTCH1P46531 2555 aa9.61□□□□□ -0.87
LDB3-207ENST00000542786 NANOS2P60321 138 aaKnown RBP9.6□□□□□ -0.87
LDB3-207ENST00000542786 ENHOQ6UWT2 76 aa9.6□□□□□ -0.87
LDB3-207ENST00000542786 LINC01600Q96MT4 127 aa9.6□□□□□ -0.87
LDB3-207ENST00000542786 K7EIL1 84 aa9.59□□□□□ -0.87
LDB3-207ENST00000542786 CCL18P55774 89 aa9.59□□□□□ -0.87
LDB3-207ENST00000542786 C6orf226Q5I0X4 101 aa9.59□□□□□ -0.87
LDB3-207ENST00000542786 IGKV2-28A0A075B6P5 120 aa9.59□□□□□ -0.87
LDB3-207ENST00000542786 M0QXV9 152 aa9.59□□□□□ -0.87
LDB3-207ENST00000542786 IGKV2D-28P01615 120 aa9.59□□□□□ -0.87
LDB3-207ENST00000542786 C2orf82Q6UX34 121 aa9.59□□□□□ -0.87
LDB3-207ENST00000542786 KLK12Q9UKR0 248 aa9.59□□□□□ -0.87
LDB3-207ENST00000542786 PRB2P02812 416 aaPredicted RBP9.58□□□□□ -0.88
LDB3-207ENST00000542786 LINC00158P58513 81 aa9.58□□□□□ -0.88
LDB3-207ENST00000542786 RNF151Q2KHN1 245 aa9.58□□□□□ -0.88
LDB3-207ENST00000542786 TM2D3Q9BRN9 247 aa9.58□□□□□ -0.88
LDB3-207ENST00000542786 GAGE12HA6NDE8 117 aa9.57□□□□□ -0.88
LDB3-207ENST00000542786 ATXN8Q156A1 80 aa9.57□□□□□ -0.88
LDB3-207ENST00000542786 LINC01620Q4KN68 170 aa9.57□□□□□ -0.88
LDB3-207ENST00000542786 WFDC10BQ8IUB3 73 aa9.57□□□□□ -0.88
LDB3-207ENST00000542786 ANK2Q01484 3957 aa9.57□□□□□ -0.88
LDB3-207ENST00000542786 C11orf45Q8TAV5 145 aa9.57□□□□□ -0.88
LDB3-207ENST00000542786 KLK5Q9Y337 293 aaPredicted RBP9.57□□□□□ -0.88
LDB3-207ENST00000542786 NBEAL1Q6ZS30 2694 aa9.56□□□□□ -0.88
LDB3-207ENST00000542786 ESRGQ1W209 222 aa9.56□□□□□ -0.88
LDB3-207ENST00000542786 LINC00337Q8N6G1 96 aa9.56□□□□□ -0.88
LDB3-207ENST00000542786 SND1-IT1Q9HBX3 110 aa9.56□□□□□ -0.88
LDB3-207ENST00000542786 DEFB131BA0A096LNP1 70 aa9.55□□□□□ -0.88
LDB3-207ENST00000542786 C9JAW5 83 aa9.55□□□□□ -0.88
LDB3-207ENST00000542786 LST1O00453 97 aa9.55□□□□□ -0.88
LDB3-207ENST00000542786 PFN2P35080 140 aa9.55□□□□□ -0.88
LDB3-207ENST00000542786 CXCL5P42830 114 aa9.55□□□□□ -0.88
LDB3-207ENST00000542786 KRTAP26-1Q6PEX3 210 aa9.55□□□□□ -0.88
LDB3-207ENST00000542786 CLEC2BQ92478 149 aa9.55□□□□□ -0.88
LDB3-207ENST00000542786 SPATA25Q9BR10 227 aa9.55□□□□□ -0.88
LDB3-207ENST00000542786 SLC25A20O43772 301 aa9.54□□□□□ -0.88
LDB3-207ENST00000542786 TEN1Q86WV5 123 aa9.54□□□□□ -0.88
LDB3-207ENST00000542786 CARD19Q96LW7 228 aa9.54□□□□□ -0.88
LDB3-207ENST00000542786 COX6CP09669 75 aa9.53□□□□□ -0.88
LDB3-207ENST00000542786 MALP21145 153 aa9.53□□□□□ -0.88
LDB3-207ENST00000542786 TRAV13-2A0A0B4J235 113 aa9.53□□□□□ -0.88
LDB3-207ENST00000542786 CKS1BP61024 79 aa9.53□□□□□ -0.88
LDB3-207ENST00000542786 TRAV8-4A0A0B4J246 113 aa9.52□□□□□ -0.89
LDB3-207ENST00000542786 TRBV10-2A0A0K0K1G8 114 aa9.52□□□□□ -0.89
LDB3-207ENST00000542786 COX17Q14061 63 aa9.52□□□□□ -0.89
LDB3-207ENST00000542786 CFAP161Q6P656 301 aa9.52□□□□□ -0.89
LDB3-207ENST00000542786 ANKRD29Q8N6D5 301 aa9.52□□□□□ -0.89
LDB3-207ENST00000542786 CRPP02741 224 aa9.51□□□□□ -0.89
LDB3-207ENST00000542786 SPAG11BQ08648 103 aa9.51□□□□□ -0.89
LDB3-207ENST00000542786 UBE2WQ96B02 151 aa9.51□□□□□ -0.89
LDB3-207ENST00000542786 VPS25Q9BRG1 176 aa9.51□□□□□ -0.89
LDB3-207ENST00000542786 CBY1Q9Y3M2 126 aa9.51□□□□□ -0.89
LDB3-207ENST00000542786 RPL28P46779 137 aaKnown RBP9.51□□□□□ -0.89
LDB3-207ENST00000542786 C10orf25Q5T742 122 aa9.51□□□□□ -0.89
LDB3-207ENST00000542786 C6orf223Q8N319 242 aa9.51□□□□□ -0.89
LDB3-207ENST00000542786 C9orf116Q5BN46 136 aaPredicted RBP9.5□□□□□ -0.89
LDB3-207ENST00000542786 LINC01556Q5JQF7 62 aa9.5□□□□□ -0.89
LDB3-207ENST00000542786 PPDPFLQ8WWR9 84 aa9.5□□□□□ -0.89
LDB3-207ENST00000542786 UNQ6190/PRO20217Q6UXQ8 127 aa9.49□□□□□ -0.89
LDB3-207ENST00000542786 MDFIQ99750 246 aa9.49□□□□□ -0.89
LDB3-207ENST00000542786 MGAM2Q2M2H8 2515 aa9.48□□□□□ -0.89
LDB3-207ENST00000542786 TRAV10A0A0B4J240 114 aa9.48□□□□□ -0.89
LDB3-207ENST00000542786 GVQW2A0A096LPI5 108 aaPredicted RBP9.47□□□□□ -0.89
LDB3-207ENST00000542786 H3BT86 120 aa9.47□□□□□ -0.89
LDB3-207ENST00000542786 Q8NDZ9 215 aa9.47□□□□□ -0.89
LDB3-207ENST00000542786 SMIM11BQ8TCY0 68 aa9.47□□□□□ -0.89
LDB3-207ENST00000542786 NTN5Q8WTR8 489 aaPredicted RBP9.47□□□□□ -0.89
LDB3-207ENST00000542786 LINC00526Q96FQ7 95 aa9.47□□□□□ -0.89
LDB3-207ENST00000542786 FAM218AQ96MZ4 157 aa9.47□□□□□ -0.89
LDB3-207ENST00000542786 J3QR89 54 aa9.47□□□□□ -0.89
LDB3-207ENST00000542786 NDUFC2O95298 119 aa9.46□□□□□ -0.9
LDB3-207ENST00000542786 DNAH10OSP0CZ25 163 aa9.46□□□□□ -0.9
LDB3-207ENST00000542786 KRTAP21-3Q3LHN1 58 aa9.46□□□□□ -0.9
LDB3-207ENST00000542786 MRAPQ8TCY5 172 aa9.46□□□□□ -0.9
LDB3-207ENST00000542786 HUWE1Q7Z6Z7 4374 aaKnown RBP9.46□□□□□ -0.9
LDB3-207ENST00000542786 MUC7Q8TAX7 377 aa9.45□□□□□ -0.9
LDB3-207ENST00000542786 TRACP01848 142 aa9.45□□□□□ -0.9
LDB3-207ENST00000542786 DEFB121Q5J5C9 76 aa9.45□□□□□ -0.9
LDB3-207ENST00000542786 C15orf53Q8NAA6 179 aa9.45□□□□□ -0.9
LDB3-207ENST00000542786 C15orf56Q8N910 161 aa9.44□□□□□ -0.9
LDB3-207ENST00000542786 C6orf48Q9UBA6 75 aa9.44□□□□□ -0.9
LDB3-207ENST00000542786 PRR3P79522 188 aaKnown RBP9.43□□□□□ -0.9
LDB3-207ENST00000542786 LINC00588Q9Y4M8 146 aa9.42□□□□□ -0.9
LDB3-207ENST00000542786 C22orf24Q9Y442 160 aa9.42□□□□□ -0.9
LDB3-207ENST00000542786 CDIP1Q9H305 208 aa9.41□□□□□ -0.9
LDB3-207ENST00000542786 TEX49A0A1B0GTD5 131 aa9.4□□□□□ -0.91
LDB3-207ENST00000542786 HIGD2BQ4VC39 106 aa9.39□□□□□ -0.91
LDB3-207ENST00000542786 A0A087WYN8 130 aa9.38□□□□□ -0.91
LDB3-207ENST00000542786 H0YGX0 51 aa9.38□□□□□ -0.91
LDB3-207ENST00000542786 OR13C6PQ8NH95 151 aa9.38□□□□□ -0.91
LDB3-207ENST00000542786 C2orf48Q96LS8 159 aa9.38□□□□□ -0.91
LDB3-207ENST00000542786 C1orf43Q9BWL3 253 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 109.2 ms