RNA–Protein interactions for RNA: ENST00000542381.1

SRGAP1-204, Transcript of SLIT-ROBO Rho GTPase activating protein 1, humanhuman

TSL 2

Gene SRGAP1, Length 360 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP1-204ENST00000542381 VAMP8Q9BV40 100 aa0.95□□□□□ -2.26
SRGAP1-204ENST00000542381 TARBP1Q13395 1621 aaKnown RBP0.95□□□□□ -2.26
SRGAP1-204ENST00000542381 ZFHX4Q86UP3 3567 aa0.95□□□□□ -2.26
SRGAP1-204ENST00000542381 CEP290O15078 2479 aa0.95□□□□□ -2.26
SRGAP1-204ENST00000542381 EYSQ5T1H1 3165 aa0.95□□□□□ -2.26
SRGAP1-204ENST00000542381 CFAP47Q6ZTR5 3102 aa0.95□□□□□ -2.26
SRGAP1-204ENST00000542381 WIZO95785 1651 aa0.94□□□□□ -2.26
SRGAP1-204ENST00000542381 LAMA2P24043 3122 aaKnown RBP0.94□□□□□ -2.26
SRGAP1-204ENST00000542381 CCDC18Q5T9S5 1454 aa0.94□□□□□ -2.26
SRGAP1-204ENST00000542381 BRCA2P51587 3418 aa0.94□□□□□ -2.26
SRGAP1-204ENST00000542381 KIF14Q15058 1648 aa0.94□□□□□ -2.26
SRGAP1-204ENST00000542381 CICQ96RK0 1608 aaPredicted RBP0.94□□□□□ -2.26
SRGAP1-204ENST00000542381 LTN1O94822 1766 aa0.94□□□□□ -2.26
SRGAP1-204ENST00000542381 A0A0D9SFI3 127 aa0.94□□□□□ -2.26
SRGAP1-204ENST00000542381 A0A1B0GWA3 101 aa0.94□□□□□ -2.26
SRGAP1-204ENST00000542381 SAA2P0DJI9 122 aaPredicted RBP0.94□□□□□ -2.26
SRGAP1-204ENST00000542381 Q9H521 79 aa0.94□□□□□ -2.26
SRGAP1-204ENST00000542381 PRO0255Q9UI72 69 aa0.94□□□□□ -2.26
SRGAP1-204ENST00000542381 TNCP24821 2201 aa0.94□□□□□ -2.26
SRGAP1-204ENST00000542381 MKI67P46013 3256 aaKnown RBP0.94□□□□□ -2.26
SRGAP1-204ENST00000542381 FLNBO75369 2602 aaKnown RBP0.94□□□□□ -2.26
SRGAP1-204ENST00000542381 ABCC2Q92887 1545 aa0.94□□□□□ -2.26
SRGAP1-204ENST00000542381 SHPRHQ149N8 1683 aa0.94□□□□□ -2.26
SRGAP1-204ENST00000542381 RNF17Q9BXT8 1623 aaKnown RBP0.93□□□□□ -2.26
SRGAP1-204ENST00000542381 MROH2BQ7Z745 1585 aa0.93□□□□□ -2.26
SRGAP1-204ENST00000542381 SPTBN4Q9H254 2564 aa0.93□□□□□ -2.26
SRGAP1-204ENST00000542381 NCOR1O75376 2440 aa0.93□□□□□ -2.26
SRGAP1-204ENST00000542381 TRBV7-7A0A0K0K1E9 115 aa0.93□□□□□ -2.26
SRGAP1-204ENST00000542381 BCE1O60756 84 aa0.93□□□□□ -2.26
SRGAP1-204ENST00000542381 PYY3Q5JQD4 70 aa0.93□□□□□ -2.26
SRGAP1-204ENST00000542381 FDCSPQ8NFU4 85 aa0.93□□□□□ -2.26
SRGAP1-204ENST00000542381 PRO1933Q9H354 126 aa0.93□□□□□ -2.26
SRGAP1-204ENST00000542381 CACFD1Q9UGQ2 172 aa0.93□□□□□ -2.26
SRGAP1-204ENST00000542381 DNAH12Q6ZR08 3092 aa0.93□□□□□ -2.26
SRGAP1-204ENST00000542381 EFCAB6Q5THR3 1501 aa0.93□□□□□ -2.26
SRGAP1-204ENST00000542381 KIAA0586Q9BVV6 1533 aa0.93□□□□□ -2.26
SRGAP1-204ENST00000542381 PTPN13Q12923 2485 aa0.93□□□□□ -2.26
SRGAP1-204ENST00000542381 RGPD8O14715 1765 aaPredicted RBP0.93□□□□□ -2.26
SRGAP1-204ENST00000542381 RGPD5Q99666 1765 aa0.93□□□□□ -2.26
SRGAP1-204ENST00000542381 RALGAPBQ86X10 1494 aa0.92□□□□□ -2.26
SRGAP1-204ENST00000542381 MUC3AQ02505 3323 aa0.92□□□□□ -2.26
SRGAP1-204ENST00000542381 CRYBG1Q9Y4K1 1723 aa0.92□□□□□ -2.26
SRGAP1-204ENST00000542381 USP24Q9UPU5 2620 aa0.92□□□□□ -2.26
SRGAP1-204ENST00000542381 MAP1BP46821 2468 aaKnown RBP0.92□□□□□ -2.26
SRGAP1-204ENST00000542381 CEP162Q5TB80 1403 aa0.92□□□□□ -2.26
SRGAP1-204ENST00000542381 PRUNE2Q8WUY3 3088 aa0.92□□□□□ -2.26
SRGAP1-204ENST00000542381 C10orf142B7Z368 130 aa0.92□□□□□ -2.26
SRGAP1-204ENST00000542381 ITPR3Q14573 2671 aa0.92□□□□□ -2.26
SRGAP1-204ENST00000542381 MAP3K1Q13233 1512 aa0.92□□□□□ -2.26
SRGAP1-204ENST00000542381 SCN11AQ9UI33 1791 aa0.92□□□□□ -2.26
SRGAP1-204ENST00000542381 TMEM131LA2VDJ0 1609 aa0.92□□□□□ -2.26
SRGAP1-204ENST00000542381 LAMC1P11047 1609 aa0.92□□□□□ -2.26
SRGAP1-204ENST00000542381 BIVM-ERCC5R4GMW8 1640 aa0.92□□□□□ -2.26
SRGAP1-204ENST00000542381 MAGI2Q86UL8 1455 aa0.92□□□□□ -2.26
SRGAP1-204ENST00000542381 MAST4O15021 2626 aa0.91□□□□□ -2.26
SRGAP1-204ENST00000542381 RGPD2P0DJD1 1756 aa0.91□□□□□ -2.26
SRGAP1-204ENST00000542381 PAPPA2Q9BXP8 1791 aa0.91□□□□□ -2.26
SRGAP1-204ENST00000542381 MAGI3Q5TCQ9 1506 aa0.91□□□□□ -2.26
SRGAP1-204ENST00000542381 PRH1P02810 166 aa0.91□□□□□ -2.26
SRGAP1-204ENST00000542381 FAUP35544 74 aaKnown RBP0.91□□□□□ -2.26
SRGAP1-204ENST00000542381 ASIPP42127 132 aa0.91□□□□□ -2.26
SRGAP1-204ENST00000542381 PSMG4Q5JS54 123 aa0.91□□□□□ -2.26
SRGAP1-204ENST00000542381 SPINK6Q6UWN8 80 aa0.91□□□□□ -2.26
SRGAP1-204ENST00000542381 TMEM263Q8WUH6 116 aaKnown RBP0.91□□□□□ -2.26
SRGAP1-204ENST00000542381 CNFNQ9BYD5 112 aa0.91□□□□□ -2.26
SRGAP1-204ENST00000542381 SPCS1Q9Y6A9 102 aa0.91□□□□□ -2.26
SRGAP1-204ENST00000542381 RANBP2P49792 3224 aaKnown RBP0.91□□□□□ -2.26
SRGAP1-204ENST00000542381 POLR1AO95602 1720 aaPredicted RBP0.91□□□□□ -2.26
SRGAP1-204ENST00000542381 CFAP54Q96N23 3096 aa0.91□□□□□ -2.26
SRGAP1-204ENST00000542381 FANCAO15360 1455 aa0.91□□□□□ -2.26
SRGAP1-204ENST00000542381 POLA1P09884 1462 aaPredicted RBP0.91□□□□□ -2.26
SRGAP1-204ENST00000542381 DIP2AQ14689 1571 aa0.91□□□□□ -2.26
SRGAP1-204ENST00000542381 EPG5Q9HCE0 2579 aa0.91□□□□□ -2.26
SRGAP1-204ENST00000542381 ARFGEF2Q9Y6D5 1785 aa0.91□□□□□ -2.26
SRGAP1-204ENST00000542381 DCHS1Q96JQ0 3298 aa0.9□□□□□ -2.26
SRGAP1-204ENST00000542381 RGPD1P0DJD0 1748 aa0.9□□□□□ -2.27
SRGAP1-204ENST00000542381 UQCRHP07919 91 aa0.9□□□□□ -2.27
SRGAP1-204ENST00000542381 PMCHL1Q16048 86 aa0.9□□□□□ -2.27
SRGAP1-204ENST00000542381 C10orf113Q5VZT2 155 aa0.9□□□□□ -2.27
SRGAP1-204ENST00000542381 SERP2Q8N6R1 65 aa0.9□□□□□ -2.27
SRGAP1-204ENST00000542381 LCN9Q8WX39 176 aa0.9□□□□□ -2.27
SRGAP1-204ENST00000542381 SPRR4Q96PI1 79 aa0.9□□□□□ -2.27
SRGAP1-204ENST00000542381 USF3Q68DE3 2245 aa0.9□□□□□ -2.27
SRGAP1-204ENST00000542381 NLRP1Q9C000 1473 aa0.9□□□□□ -2.27
SRGAP1-204ENST00000542381 MYO9AB2RTY4 2548 aa0.9□□□□□ -2.27
SRGAP1-204ENST00000542381 ABCA8O94911 1581 aa0.9□□□□□ -2.27
SRGAP1-204ENST00000542381 HECTD1Q9ULT8 2610 aa0.9□□□□□ -2.27
SRGAP1-204ENST00000542381 PKD1L3Q7Z443 1732 aa0.89□□□□□ -2.27
SRGAP1-204ENST00000542381 CENPFP49454 3210 aa0.89□□□□□ -2.27
SRGAP1-204ENST00000542381 CEP170BQ9Y4F5 1589 aaPredicted RBP0.89□□□□□ -2.27
SRGAP1-204ENST00000542381 NRXN1Q9ULB1 1477 aa0.89□□□□□ -2.27
SRGAP1-204ENST00000542381 H7BZZ5 65 aa0.89□□□□□ -2.27
SRGAP1-204ENST00000542381 K7EP34 96 aa0.89□□□□□ -2.27
SRGAP1-204ENST00000542381 GYPAP02724 150 aa0.89□□□□□ -2.27
SRGAP1-204ENST00000542381 DEFB123Q8N688 67 aa0.89□□□□□ -2.27
SRGAP1-204ENST00000542381 TRGV9Q99603 122 aa0.89□□□□□ -2.27
SRGAP1-204ENST00000542381 C20orf78Q9BR46 151 aa0.89□□□□□ -2.27
SRGAP1-204ENST00000542381 LAMA3Q16787 3333 aa0.89□□□□□ -2.27
SRGAP1-204ENST00000542381 ANK2Q01484 3957 aa0.89□□□□□ -2.27
SRGAP1-204ENST00000542381 KALRNO60229 2985 aa0.89□□□□□ -2.27
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms