RNA–Protein interactions for RNA: ENST00000539941.6

COPS3-212, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2 BASIC

Gene COPS3, Length 1,699 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-212ENST00000539941 TRBV30A0A0K0K1B3 111 aa11.7□□□□□ -0.54
COPS3-212ENST00000539941 TINCRA0A1B0GVN0 87 aa11.7□□□□□ -0.54
COPS3-212ENST00000539941 RNASE13Q5GAN3 156 aaKnown RBP11.7□□□□□ -0.54
COPS3-212ENST00000539941 SFTA2Q6UW10 78 aa11.7□□□□□ -0.54
COPS3-212ENST00000539941 FAM19A3Q7Z5A8 133 aa11.69□□□□□ -0.54
COPS3-212ENST00000539941 A0A096LPF7 62 aa11.68□□□□□ -0.54
COPS3-212ENST00000539941 A0A1B0GUV1 79 aa11.68□□□□□ -0.54
COPS3-212ENST00000539941 ZNF22P17026 224 aaPredicted RBP11.68□□□□□ -0.54
COPS3-212ENST00000539941 TIRAPP58753 221 aa11.68□□□□□ -0.54
COPS3-212ENST00000539941 NANOS2P60321 138 aaKnown RBP11.68□□□□□ -0.54
COPS3-212ENST00000539941 J3KT08 172 aa11.67□□□□□ -0.54
COPS3-212ENST00000539941 TMEM223A0PJW6 202 aa11.66□□□□□ -0.54
COPS3-212ENST00000539941 LGALS3P17931 250 aaKnown RBP11.66□□□□□ -0.54
COPS3-212ENST00000539941 RPS28P62857 69 aaKnown RBP11.66□□□□□ -0.54
COPS3-212ENST00000539941 LELP1Q5T871 98 aa11.66□□□□□ -0.54
COPS3-212ENST00000539941 B9D2Q9BPU9 175 aa11.66□□□□□ -0.54
COPS3-212ENST00000539941 DEFB131BA0A096LNP1 70 aa11.65□□□□□ -0.54
COPS3-212ENST00000539941 UQCRQO14949 82 aa11.65□□□□□ -0.54
COPS3-212ENST00000539941 COX6CP09669 75 aa11.65□□□□□ -0.54
COPS3-212ENST00000539941 HERVK_113P63121 156 aa11.65□□□□□ -0.54
COPS3-212ENST00000539941 IGLV5-45A0A087WSX0 123 aa11.65□□□□□ -0.55
COPS3-212ENST00000539941 C2orf82Q6UX34 121 aa11.65□□□□□ -0.55
COPS3-212ENST00000539941 HUWE1Q7Z6Z7 4374 aaKnown RBP11.65□□□□□ -0.55
COPS3-212ENST00000539941 C3orf22Q8N5N4 141 aa11.65□□□□□ -0.55
COPS3-212ENST00000539941 DNAH9Q9NYC9 4486 aa11.65□□□□□ -0.55
COPS3-212ENST00000539941 TENM3Q9P273 2699 aa11.65□□□□□ -0.55
COPS3-212ENST00000539941 PPDPFQ9H3Y8 114 aa11.64□□□□□ -0.55
COPS3-212ENST00000539941 IGLV4-60A0A075B6I1 120 aa11.63□□□□□ -0.55
COPS3-212ENST00000539941 TRAV10A0A0B4J240 114 aa11.63□□□□□ -0.55
COPS3-212ENST00000539941 A4D1N5 150 aa11.63□□□□□ -0.55
COPS3-212ENST00000539941 LINC00242Q5T6M2 205 aa11.63□□□□□ -0.55
COPS3-212ENST00000539941 OR13C6PQ8NH95 151 aa11.63□□□□□ -0.55
COPS3-212ENST00000539941 J3QQQ9 107 aa11.62□□□□□ -0.55
COPS3-212ENST00000539941 LEPROTO15243 131 aa11.62□□□□□ -0.55
COPS3-212ENST00000539941 Q1RN00 199 aa11.62□□□□□ -0.55
COPS3-212ENST00000539941 C9orf153Q5TBE3 101 aa11.62□□□□□ -0.55
COPS3-212ENST00000539941 TRAV13-1A0A0B4J241 112 aa11.62□□□□□ -0.55
COPS3-212ENST00000539941 LINC00526Q96FQ7 95 aa11.62□□□□□ -0.55
COPS3-212ENST00000539941 TEX49A0A1B0GTD5 131 aa11.61□□□□□ -0.55
COPS3-212ENST00000539941 LYPD5Q6UWN5 251 aa11.61□□□□□ -0.55
COPS3-212ENST00000539941 COL7A1Q02388 2944 aa11.61□□□□□ -0.55
COPS3-212ENST00000539941 IGHV1-58A0A0C4DH39 117 aa11.59□□□□□ -0.55
COPS3-212ENST00000539941 CXCL5P42830 114 aa11.59□□□□□ -0.55
COPS3-212ENST00000539941 CDKN2A-AS1Q9UH64 79 aa11.59□□□□□ -0.55
COPS3-212ENST00000539941 COX6A2Q02221 97 aa11.58□□□□□ -0.56
COPS3-212ENST00000539941 LINC00643Q86TS7 51 aa11.58□□□□□ -0.56
COPS3-212ENST00000539941 IGHV3-30-3P0DP02 117 aa11.56□□□□□ -0.56
COPS3-212ENST00000539941 TSPEAR-AS2P59090 65 aa11.56□□□□□ -0.56
COPS3-212ENST00000539941 LINC00959A0A1B0GUT2 108 aa11.55□□□□□ -0.56
COPS3-212ENST00000539941 FAM236AA0A1B0GUQ0 79 aa11.55□□□□□ -0.56
COPS3-212ENST00000539941 FAM236BA0A1B0GV22 79 aa11.55□□□□□ -0.56
COPS3-212ENST00000539941 SS18Q15532 418 aa11.55□□□□□ -0.56
COPS3-212ENST00000539941 MUSTN1Q8IVN3 82 aa11.55□□□□□ -0.56
COPS3-212ENST00000539941 IGHV3-64A0A075B6Q5 118 aa11.54□□□□□ -0.56
COPS3-212ENST00000539941 TRAV8-3A0A0A6YYJ7 113 aa11.54□□□□□ -0.56
COPS3-212ENST00000539941 IGKV3OR2-268A0A0C4DH90 116 aa11.54□□□□□ -0.56
COPS3-212ENST00000539941 IGLV5-39A0A0G2JS06 123 aa11.54□□□□□ -0.56
COPS3-212ENST00000539941 TRIAP1O43715 76 aa11.54□□□□□ -0.56
COPS3-212ENST00000539941 LST1O00453 97 aa11.53□□□□□ -0.56
COPS3-212ENST00000539941 ANGP03950 147 aaKnown RBP11.53□□□□□ -0.56
COPS3-212ENST00000539941 SMIM1B2RUZ4 78 aa11.52□□□□□ -0.56
COPS3-212ENST00000539941 CRYGAP11844 174 aa11.52□□□□□ -0.56
COPS3-212ENST00000539941 IGHV3OR16-9A0A0B4J2B5 98 aa11.52□□□□□ -0.57
COPS3-212ENST00000539941 COX7CP15954 63 aa11.52□□□□□ -0.57
COPS3-212ENST00000539941 REG3AQ06141 175 aa11.52□□□□□ -0.57
COPS3-212ENST00000539941 ESRGQ1W209 222 aa11.52□□□□□ -0.57
COPS3-212ENST00000539941 LINC00269Q8N2A0 174 aa11.52□□□□□ -0.57
COPS3-212ENST00000539941 H7C2G1 150 aa11.51□□□□□ -0.57
COPS3-212ENST00000539941 EIF4EBP3O60516 100 aaPredicted RBP11.5□□□□□ -0.57
COPS3-212ENST00000539941 A0A087WZ39 114 aa11.49□□□□□ -0.57
COPS3-212ENST00000539941 ATOX1O00244 68 aa11.49□□□□□ -0.57
COPS3-212ENST00000539941 GAGE2AQ6NT46 116 aa11.49□□□□□ -0.57
COPS3-212ENST00000539941 LINC01561Q8N1V8 128 aa11.49□□□□□ -0.57
COPS3-212ENST00000539941 Q8N3U1 123 aa11.49□□□□□ -0.57
COPS3-212ENST00000539941 PRR34Q9NV39 138 aa11.49□□□□□ -0.57
COPS3-212ENST00000539941 NDUFA12Q9UI09 145 aa11.49□□□□□ -0.57
COPS3-212ENST00000539941 FAM19A5Q7Z5A7 132 aaPredicted RBP11.49□□□□□ -0.57
COPS3-212ENST00000539941 CLPSL2Q6UWE3 100 aa11.48□□□□□ -0.57
COPS3-212ENST00000539941 SDIM1Q6ZPB5 146 aa11.48□□□□□ -0.57
COPS3-212ENST00000539941 WFDC10BQ8IUB3 73 aa11.48□□□□□ -0.57
COPS3-212ENST00000539941 TMEM258P61165 79 aa11.47□□□□□ -0.57
COPS3-212ENST00000539941 CD164L2Q6UWJ8 174 aa11.47□□□□□ -0.57
COPS3-212ENST00000539941 A0A0J9YXY3 114 aa11.46□□□□□ -0.57
COPS3-212ENST00000539941 NDUFA1O15239 70 aa11.46□□□□□ -0.57
COPS3-212ENST00000539941 XCL1P47992 114 aa11.46□□□□□ -0.57
COPS3-212ENST00000539941 C5orf38Q86SI9 138 aa11.46□□□□□ -0.57
COPS3-212ENST00000539941 TIMM17BO60830 172 aa11.46□□□□□ -0.58
COPS3-212ENST00000539941 LINC01556Q5JQF7 62 aa11.46□□□□□ -0.58
COPS3-212ENST00000539941 DAND5Q8N907 189 aa11.46□□□□□ -0.58
COPS3-212ENST00000539941 CHCHD10Q8WYQ3 142 aaPredicted RBP11.46□□□□□ -0.58
COPS3-212ENST00000539941 KLK12Q9UKR0 248 aa11.46□□□□□ -0.58
COPS3-212ENST00000539941 CRPP02741 224 aa11.44□□□□□ -0.58
COPS3-212ENST00000539941 CCL18P55774 89 aa11.44□□□□□ -0.58
COPS3-212ENST00000539941 MIAQ16674 131 aa11.44□□□□□ -0.58
COPS3-212ENST00000539941 TRACP01848 142 aa11.43□□□□□ -0.58
COPS3-212ENST00000539941 COX7B2Q8TF08 81 aa11.43□□□□□ -0.58
COPS3-212ENST00000539941 COPS9Q8WXC6 57 aa11.43□□□□□ -0.58
COPS3-212ENST00000539941 DNAH10OSP0CZ25 163 aa11.43□□□□□ -0.58
COPS3-212ENST00000539941 INAFM2P0DMQ5 153 aa11.43□□□□□ -0.58
COPS3-212ENST00000539941 ENHOQ6UWT2 76 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms